pycom12g20600

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
22051646 .. 22051843
198 bp
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UTR
Exon/CDS
Intron
pycom12g20600.1

Sequence Viewer

Length: 198 bp
ATGCCTGTCTTAAAAGCAAATGGAGAGGTTTTTGCACTGTGTATGCAGTTAAATGACGATGTTGTATTTCATATGCAAGAAATGATTTCATCAAGTATGTTGTATCTACTATATATGCAAAACAGATTGCTAGCTAATCTTATTCTTATTAACTCTTCCCTTTTACCTTTCGATTTCTGTTACGATGCAGGCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

7.47

Weight (kDa)

4.23

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029239)

Species Orthologous Gene IDs
pyrus_communis pycom03g15970 pycom12g20600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AluBI AGCT 1 cut(s) 134
AluI AGCT 1 cut(s) 134
AsuNHI GCTAGC 1 cut(s) 130
BfaI CTAG 1 cut(s) 131
BmsI GCATC 1 cut(s) 175
BmtI GCTAGC 1 cut(s) 134
BspOI GCTAGC 1 cut(s) 134
Bst4CI ACNGT 1 cut(s) 39
Bst6I CTCTTC 1 cut(s) 160
BstC8I GCNNGC 2 cut(s) 132, 190
BtsIMutI CAGTG 1 cut(s) 35
Cac8I GCNNGC 2 cut(s) 132, 190
CviJI RGCY 2 cut(s) 134, 192
CviKI_1 RGCY 2 cut(s) 134, 192
Eam1104I CTCTTC 1 cut(s) 160
EarI CTCTTC 1 cut(s) 160
FaiI YATR 7 cut(s) 44, 72, 74, 98, 112, 114, 116
FauNDI CATATG 1 cut(s) 72
FspBI CTAG 1 cut(s) 131
FspEI CC 7 cut(s) 6, 11, 18, 172, 173, 174, 180
HpyCH4III ACNGT 1 cut(s) 39
HpyCH4V TGCA 5 cut(s) 35, 46, 76, 118, 188
LpnPI CCDG 2 cut(s) 18, 174
LweI GCATC 1 cut(s) 175
MaeI CTAG 1 cut(s) 131
MaeIII GTNAC 1 cut(s) 179
MboII GAAGA 1 cut(s) 147
MnlI CCTC 1 cut(s) 19
MseI TTAA 3 cut(s) 11, 50, 150
NdeI CATATG 1 cut(s) 72
NheI GCTAGC 1 cut(s) 130
SaqAI TTAA 3 cut(s) 11, 50, 150
SetI ASST 3 cut(s) 30, 136, 169
SfaNI GCATC 1 cut(s) 175
SgeI CNNG 4 cut(s) 17, 89, 105, 143
SspMI CTAG 1 cut(s) 131
TaaI ACNGT 1 cut(s) 39
TaqI TCGA 1 cut(s) 171
Tru1I TTAA 3 cut(s) 11, 50, 150
Tru9I TTAA 3 cut(s) 11, 50, 150
TscAI CASTG 1 cut(s) 42
TspDTI ATGAA 2 cut(s) 59, 78
TspRI CASTG 1 cut(s) 42
XspI CTAG 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.