pycom03g20110

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
20654888 .. 20655088
201 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 201 bp
ATGTTTCACACGAAATTAAATCATTCCCTAAGTTTGGAAACAAGGAAGACAAAACAGGTTGGGAAGGATGAGCTAAACGTTGATGCCACAATTGACTATCTTGGGATGGACTGGACTTGGCTTGAAATCCTCTGGGACTGTTTTTTGATATGTAATAGAGGCCATCTAGGTAAAACCCTTCACCAATCGTCTTCTTGGTGA

Protein Analysis

67

Amino Acids

7.76

Weight (kDa)

6.38

Isoelectric Point (pI)

21.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029205)

Species Orthologous Gene IDs
pyrus_communis pycom01g21340 pycom03g20110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 78
AfiI CCNNNNNNNGG 1 cut(s) 34
AgsI TTSAA 1 cut(s) 125
AluBI AGCT 1 cut(s) 73
AluI AGCT 1 cut(s) 73
AoxI GGCC 1 cut(s) 160
AsuHPI GGTGA 1 cut(s) 173
BbsI GAAGAC 2 cut(s) 53, 183
BccI CCATC 2 cut(s) 100, 171
BfaI CTAG 1 cut(s) 167
BmsI GCATC 1 cut(s) 73
BpiI GAAGAC 2 cut(s) 53, 183
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse1I ACTGG 1 cut(s) 116
BseGI GGATG 2 cut(s) 73, 111
BseLI CCNNNNNNNGG 1 cut(s) 34
BseNI ACTGG 1 cut(s) 116
BshFI GGCC 1 cut(s) 162
BslFI GGGAC 1 cut(s) 149
BslI CCNNNNNNNGG 1 cut(s) 34
BsmFI GGGAC 1 cut(s) 149
BsnI GGCC 1 cut(s) 162
BspANI GGCC 1 cut(s) 162
BsrI ACTGG 1 cut(s) 116
Bst4CI ACNGT 1 cut(s) 140
BstDEI CTNAG 1 cut(s) 29
BstF5I GGATG 2 cut(s) 73, 111
BstV2I GAAGAC 2 cut(s) 53, 183
BsuRI GGCC 1 cut(s) 162
BtsCI GGATG 2 cut(s) 73, 111
CviJI RGCY 3 cut(s) 73, 121, 162
CviKI_1 RGCY 3 cut(s) 73, 121, 162
DdeI CTNAG 1 cut(s) 29
FaiI YATR 1 cut(s) 151
FaqI GGGAC 1 cut(s) 149
FokI GGATG 2 cut(s) 80, 118
FspBI CTAG 1 cut(s) 167
HaeIII GGCC 1 cut(s) 162
HphI GGTGA 1 cut(s) 173
HpyAV CCTTC 2 cut(s) 58, 188
HpyCH4III ACNGT 1 cut(s) 140
HpyCH4IV ACGT 1 cut(s) 78
HpyF3I CTNAG 1 cut(s) 29
HpySE526I ACGT 1 cut(s) 78
LpnPI CCDG 3 cut(s) 41, 97, 118
LweI GCATC 1 cut(s) 73
MaeI CTAG 1 cut(s) 167
MaeII ACGT 1 cut(s) 78
MboII GAAGA 2 cut(s) 58, 183
MfeI CAATTG 1 cut(s) 90
MluCI AATT 2 cut(s) 14, 90
MnlI CCTC 2 cut(s) 140, 152
MseI TTAA 1 cut(s) 17
MunI CAATTG 1 cut(s) 90
Psp1406I AACGTT 1 cut(s) 78
SaqAI TTAA 1 cut(s) 17
SetI ASST 4 cut(s) 60, 75, 81, 172
SfaNI GCATC 1 cut(s) 73
SgeI CNNG 9 cut(s) 22, 54, 68, 113, 124, 129, 134, 145, 179
Sse9I AATT 2 cut(s) 14, 90
SspMI CTAG 1 cut(s) 167
TaaI ACNGT 1 cut(s) 140
TaiI ACGT 1 cut(s) 81
TasI AATT 2 cut(s) 14, 90
Tru1I TTAA 1 cut(s) 17
Tru9I TTAA 1 cut(s) 17
XspI CTAG 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.