pycom04g04950

L-asparagine biosynthetic process

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
4590062 .. 4590352
291 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 192 bp
ATGTTTATTAATTTTTTAAAATTTCAGCAGAAATCAATTGAAACGAAGTACAATTTGATGATTGAATGCAGGGAAAATGCAGTGGAGAGCCTTTTCTTGCTCTCAAATCCAGCGAATCAAGCTGGACCACCAGTCCATCCGCACCACCAACGTTCCTGCACTTTACTAAAGATTGAAGCCCCGTGGACCTGA

Protein Analysis

64

Amino Acids

7.31

Weight (kDa)

7.85

Isoelectric Point (pI)

62.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028445)

Species Orthologous Gene IDs
malus_domestica MD09G1287600.v1.1
pyrus_communis pycom04g04950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 140
AclI AACGTT 1 cut(s) 151
AcsI RAATTY 1 cut(s) 20
AfaI GTAC 1 cut(s) 50
AgsI TTSAA 3 cut(s) 41, 65, 176
AhdI GACNNNNNGTC 1 cut(s) 131
AluBI AGCT 1 cut(s) 122
AluI AGCT 1 cut(s) 122
ApoI RAATTY 1 cut(s) 20
AseI ATTAAT 1 cut(s) 9
AspS9I GGNCC 2 cut(s) 125, 186
AvaII GGWCC 2 cut(s) 125, 186
BccI CCATC 1 cut(s) 144
Bme18I GGWCC 2 cut(s) 125, 186
BmeRI GACNNNNNGTC 1 cut(s) 131
BmgT120I GGNCC 2 cut(s) 125, 186
BsaJI CCNNGG 1 cut(s) 182
Bse1I ACTGG 1 cut(s) 131
BseDI CCNNGG 1 cut(s) 182
BseGI GGATG 1 cut(s) 136
BseNI ACTGG 1 cut(s) 131
BsgI GTGCAG 1 cut(s) 142
BsmI GAATGC 1 cut(s) 71
BspACI CCGC 1 cut(s) 140
BsrI ACTGG 1 cut(s) 131
BssECI CCNNGG 1 cut(s) 182
BstDSI CCRYGG 1 cut(s) 182
BstF5I GGATG 1 cut(s) 136
BstMWI GCNNNNNNNGC 1 cut(s) 119
BtgI CCRYGG 1 cut(s) 182
BtsCI GGATG 1 cut(s) 136
BtsI GCAGTG 1 cut(s) 87
BtsIMutI CAGTG 1 cut(s) 87
Cfr13I GGNCC 2 cut(s) 125, 186
Csp6I GTAC 1 cut(s) 49
CviJI RGCY 3 cut(s) 90, 122, 179
CviKI_1 RGCY 3 cut(s) 90, 122, 179
CviQI GTAC 1 cut(s) 49
DraI TTTAAA 1 cut(s) 18
DriI GACNNNNNGTC 1 cut(s) 131
Eam1105I GACNNNNNGTC 1 cut(s) 131
Eco47I GGWCC 2 cut(s) 125, 186
FokI GGATG 1 cut(s) 123
HinfI GANTC 1 cut(s) 115
Hpy166II GTNNAC 1 cut(s) 186
Hpy8I GTNNAC 1 cut(s) 186
HpyCH4IV ACGT 1 cut(s) 151
HpyCH4V TGCA 3 cut(s) 69, 80, 159
HpyF10VI GCNNNNNNNGC 1 cut(s) 119
HpySE526I ACGT 1 cut(s) 151
LpnPI CCDG 5 cut(s) 55, 108, 123, 144, 169
MaeII ACGT 1 cut(s) 151
MfeI CAATTG 1 cut(s) 36
MluCI AATT 4 cut(s) 10, 20, 36, 52
MseI TTAA 2 cut(s) 9, 17
MunI CAATTG 1 cut(s) 36
Mva1269I GAATGC 1 cut(s) 71
MwoI GCNNNNNNNGC 1 cut(s) 119
PctI GAATGC 1 cut(s) 71
PfeI GAWTC 1 cut(s) 115
PshBI ATTAAT 1 cut(s) 9
Psp1406I AACGTT 1 cut(s) 151
PspPI GGNCC 2 cut(s) 125, 186
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
SaqAI TTAA 2 cut(s) 9, 17
Sau96I GGNCC 2 cut(s) 125, 186
SetI ASST 3 cut(s) 124, 154, 191
SgeI CNNG 7 cut(s) 82, 109, 122, 131, 135, 143, 168
SinI GGWCC 2 cut(s) 125, 186
Sse9I AATT 4 cut(s) 10, 20, 36, 52
SsiI CCGC 1 cut(s) 140
TaiI ACGT 1 cut(s) 154
TasI AATT 4 cut(s) 10, 20, 36, 52
TatI WGTACW 1 cut(s) 48
TfiI GAWTC 1 cut(s) 115
Tru1I TTAA 2 cut(s) 9, 17
Tru9I TTAA 2 cut(s) 9, 17
TscAI CASTG 1 cut(s) 87
TspRI CASTG 1 cut(s) 87
VpaK11BI GGWCC 2 cut(s) 125, 186
VspI ATTAAT 1 cut(s) 9
XapI RAATTY 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.