pycom07g04370

ATP-dependent DNA helicase Q-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
3765689 .. 3766043
355 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g04370.1

Sequence Viewer

Length: 267 bp
ATGAATAGGGCACCTCATATGAAGCAAGATCGTCCCAATCTGGGTCAAGATTTCTGTGCCCAGACGCCTGTTAAAGCTATTTTGTTGGAACATGTCAACGCGCTGGATAATTTCTCGTGCCCGCATAGTTTTCTGAGTTCAAATTTTATTTTCTCCTTACCAACACAAAAACCTCTTGCCAAAGAGGCAATGGTTTCCGGGTATGTCGCGGTTATACGTGTTTTCCTTCATTTTTGTTTGTTTTGTTTGTACTGTTATTTCATTTGA

Protein Analysis

89

Amino Acids

10.06

Weight (kDa)

8.35

Isoelectric Point (pI)

30.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029313)

Species Orthologous Gene IDs
pyrus_communis pycom07g04360 pycom07g04370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 10
AccII CGCG 2 cut(s) 101, 209
AciI CCGC 2 cut(s) 122, 209
AcsI RAATTY 1 cut(s) 142
AcyI GRCGYC 1 cut(s) 65
AfaI GTAC 1 cut(s) 251
AfiI CCNNNNNNNGG 1 cut(s) 41
AflIII ACRYGT 2 cut(s) 91, 217
AgsI TTSAA 1 cut(s) 141
AluBI AGCT 1 cut(s) 77
AluI AGCT 1 cut(s) 77
ApoI RAATTY 1 cut(s) 142
AspLEI GCGC 1 cut(s) 103
AsuC2I CCSGG 1 cut(s) 199
BaeGI GKGCMC 3 cut(s) 13, 61, 122
BanI GGYRCC 1 cut(s) 10
BauI CACGAG 1 cut(s) 115
BcnI CCSGG 1 cut(s) 199
BglI GCCNNNNNGGC 1 cut(s) 185
Bme1390I CCNGG 1 cut(s) 199
BmiI GGNNCC 1 cut(s) 12
BmrFI CCNGG 1 cut(s) 199
BpuMI CCSGG 1 cut(s) 199
BsaAI YACGTR 1 cut(s) 218
BsaHI GRCGYC 1 cut(s) 65
Bsc4I CCNNNNNNNGG 1 cut(s) 41
Bse3DI GCAATG 1 cut(s) 195
BseLI CCNNNNNNNGG 1 cut(s) 41
BseMI GCAATG 1 cut(s) 195
BseMII CTCAG 1 cut(s) 125
BseSI GKGCMC 3 cut(s) 13, 61, 122
Bsh1236I CGCG 2 cut(s) 101, 209
BshNI GGYRCC 1 cut(s) 10
BsiSI CCGG 1 cut(s) 198
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 1 cut(s) 41
BsmFI GGGAC 1 cut(s) 18
Bsp1286I GDGCHC 3 cut(s) 13, 61, 122
Bsp143I GATC 1 cut(s) 28
BspACI CCGC 2 cut(s) 122, 209
BspCNI CTCAG 1 cut(s) 126
BspFNI CGCG 2 cut(s) 101, 209
BspLI GGNNCC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 10
BsrDI GCAATG 1 cut(s) 195
BssMI GATC 1 cut(s) 28
BssNI GRCGYC 1 cut(s) 65
BssSI CACGAG 1 cut(s) 115
Bst2BI CACGAG 1 cut(s) 115
Bst4CI ACNGT 1 cut(s) 254
BstACI GRCGYC 1 cut(s) 65
BstBAI YACGTR 1 cut(s) 218
BstC8I GCNNGC 1 cut(s) 122
BstDEI CTNAG 1 cut(s) 134
BstFNI CGCG 2 cut(s) 101, 209
BstHHI GCGC 1 cut(s) 103
BstKTI GATC 1 cut(s) 31
BstMBI GATC 1 cut(s) 28
BstMWI GCNNNNNNNGC 1 cut(s) 185
BstNSI RCATGY 1 cut(s) 95
BstSCI CCNGG 1 cut(s) 197
BstSLI GKGCMC 3 cut(s) 13, 61, 122
BstUI CGCG 2 cut(s) 101, 209
Cac8I GCNNGC 1 cut(s) 122
CfoI GCGC 1 cut(s) 103
CseI GACGC 1 cut(s) 73
Csp6I GTAC 1 cut(s) 250
CviAII CATG 1 cut(s) 92
CviJI RGCY 1 cut(s) 77
CviKI_1 RGCY 1 cut(s) 77
CviQI GTAC 1 cut(s) 250
DdeI CTNAG 1 cut(s) 134
DpnI GATC 1 cut(s) 30
DpnII GATC 1 cut(s) 28
FaeI CATG 1 cut(s) 95
FaiI YATR 6 cut(s) 18, 20, 93, 126, 204, 215
FaqI GGGAC 1 cut(s) 18
FatI CATG 1 cut(s) 91
FauI CCCGC 1 cut(s) 129
FauNDI CATATG 1 cut(s) 18
GlaI GCGC 1 cut(s) 102
HapII CCGG 1 cut(s) 198
HgaI GACGC 1 cut(s) 73
HhaI GCGC 1 cut(s) 103
Hin1I GRCGYC 1 cut(s) 65
Hin1II CATG 1 cut(s) 95
Hin6I GCGC 1 cut(s) 101
HinP1I GCGC 1 cut(s) 101
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HpaII CCGG 1 cut(s) 198
Hpy166II GTNNAC 1 cut(s) 97
Hpy188I TCNGA 1 cut(s) 135
Hpy188III TCNNGA 1 cut(s) 47
Hpy8I GTNNAC 1 cut(s) 97
HpyAV CCTTC 1 cut(s) 236
HpyCH4III ACNGT 1 cut(s) 254
HpyCH4IV ACGT 1 cut(s) 217
HpyF10VI GCNNNNNNNGC 1 cut(s) 185
HpyF3I CTNAG 1 cut(s) 134
HpySE526I ACGT 1 cut(s) 217
Hsp92I GRCGYC 1 cut(s) 65
Hsp92II CATG 1 cut(s) 95
HspAI GCGC 1 cut(s) 101
Kzo9I GATC 1 cut(s) 28
LpnPI CCDG 5 cut(s) 26, 74, 81, 89, 211
MaeII ACGT 1 cut(s) 217
MalI GATC 1 cut(s) 30
MboI GATC 1 cut(s) 28
MhlI GDGCHC 3 cut(s) 13, 61, 122
MluCI AATT 2 cut(s) 109, 142
MmeI TCCRAC 1 cut(s) 66
MnlI CCTC 3 cut(s) 24, 178, 183
MseI TTAA 1 cut(s) 72
MspI CCGG 1 cut(s) 198
MspR9I CCNGG 1 cut(s) 199
MvnI CGCG 2 cut(s) 101, 209
MwoI GCNNNNNNNGC 1 cut(s) 185
NciI CCSGG 1 cut(s) 199
NdeI CATATG 1 cut(s) 18
NdeII GATC 1 cut(s) 28
NlaIII CATG 1 cut(s) 95
NlaIV GGNNCC 1 cut(s) 12
NspI RCATGY 1 cut(s) 95
PciI ACATGT 1 cut(s) 91
Ppu21I YACGTR 1 cut(s) 218
PscI ACATGT 1 cut(s) 91
PspN4I GGNNCC 1 cut(s) 12
RsaI GTAC 1 cut(s) 251
RsaNI GTAC 1 cut(s) 250
SaqAI TTAA 1 cut(s) 72
Sau3AI GATC 1 cut(s) 28
ScrFI CCNGG 1 cut(s) 199
SduI GDGCHC 3 cut(s) 13, 61, 122
SetI ASST 4 cut(s) 16, 79, 175, 220
Sse9I AATT 2 cut(s) 109, 142
SsiI CCGC 2 cut(s) 122, 209
StyD4I CCNGG 1 cut(s) 197
TaaI ACNGT 1 cut(s) 254
TaiI ACGT 1 cut(s) 220
TasI AATT 2 cut(s) 109, 142
TatI WGTACW 1 cut(s) 249
Tru1I TTAA 1 cut(s) 72
Tru9I TTAA 1 cut(s) 72
TspDTI ATGAA 4 cut(s) 17, 35, 218, 250
XapI RAATTY 1 cut(s) 142
XceI RCATGY 1 cut(s) 95
XcmI CCANNNNNNNNNTGG 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.