pycom07g15190

Arginine serine-rich-splicing factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
17328269 .. 17328748
480 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 210 bp
ATGAAAGCCCAACCTTACCCTCTCTATCTTCTGACTATTCCTGTATCATTTGGGGATTGTTTGGACTGTTTGTTTCGGTGCAATTTGCACGAAAATGGCAACAATGAGGCCAGTTTTCGTCGGCAAACTCGGCAATCGGAGCTGGACCGGTTGTTCTCTAAATACGGGAGGGTCGAGCGTGTCCATATGAAGTCTGGTGTGTCTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

70

Amino Acids

8.02

Weight (kDa)

8.99

Isoelectric Point (pI)

39.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028864)

Species Orthologous Gene IDs
malus_domestica MD07G1154600.v1.1
pyrus_communis pycom07g15190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgeI ACCGGT 1 cut(s) 147
AloI GAACNNNNNNTCC 2 cut(s) 137, 169
AluBI AGCT 1 cut(s) 142
AluI AGCT 1 cut(s) 142
AoxI GGCC 1 cut(s) 108
AsiGI ACCGGT 1 cut(s) 147
AspS9I GGNCC 1 cut(s) 145
AvaII GGWCC 1 cut(s) 145
Bme18I GGWCC 1 cut(s) 145
BmgT120I GGNCC 1 cut(s) 145
BsaWI WCCGGW 1 cut(s) 147
Bse118I RCCGGY 1 cut(s) 147
Bse1I ACTGG 1 cut(s) 111
BseNI ACTGG 1 cut(s) 111
BshFI GGCC 1 cut(s) 110
BshTI ACCGGT 1 cut(s) 147
BsiSI CCGG 1 cut(s) 148
BsnI GGCC 1 cut(s) 110
BspANI GGCC 1 cut(s) 110
BsrFI RCCGGY 1 cut(s) 147
BsrI ACTGG 1 cut(s) 111
BssAI RCCGGY 1 cut(s) 147
Bst4CI ACNGT 1 cut(s) 68
BstMWI GCNNNNNNNGC 2 cut(s) 130, 139
BsuRI GGCC 1 cut(s) 110
Cfr10I RCCGGY 1 cut(s) 147
Cfr13I GGNCC 1 cut(s) 145
CspAI ACCGGT 1 cut(s) 147
CviJI RGCY 3 cut(s) 8, 110, 142
CviKI_1 RGCY 3 cut(s) 8, 110, 142
Eco47I GGWCC 1 cut(s) 145
FaiI YATR 2 cut(s) 186, 188
FauNDI CATATG 1 cut(s) 186
HaeIII GGCC 1 cut(s) 110
HapII CCGG 1 cut(s) 148
HpaII CCGG 1 cut(s) 148
Hpy188I TCNGA 2 cut(s) 33, 139
Hpy99I CGWCG 1 cut(s) 123
HpyCH4III ACNGT 1 cut(s) 68
HpyCH4V TGCA 2 cut(s) 81, 88
HpyF10VI GCNNNNNNNGC 2 cut(s) 130, 139
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 5 cut(s) 54, 124, 128, 161, 180
MboII GAAGA 1 cut(s) 20
MluCI AATT 1 cut(s) 82
MnlI CCTC 3 cut(s) 30, 100, 162
MslI CAYNNNNRTG 1 cut(s) 93
MspI CCGG 1 cut(s) 148
MwoI GCNNNNNNNGC 2 cut(s) 130, 139
NdeI CATATG 1 cut(s) 186
NmeAIII GCCGAG 1 cut(s) 109
PcsI WCGNNNNNNNCGW 1 cut(s) 171
PinAI ACCGGT 1 cut(s) 147
PspPI GGNCC 1 cut(s) 145
RseI CAYNNNNRTG 1 cut(s) 93
Sau96I GGNCC 1 cut(s) 145
SetI ASST 2 cut(s) 16, 144
SgeI CNNG 9 cut(s) 53, 101, 123, 141, 155, 160, 178, 187, 191
SinI GGWCC 1 cut(s) 145
SmiMI CAYNNNNRTG 1 cut(s) 93
Sse9I AATT 1 cut(s) 82
TaaI ACNGT 1 cut(s) 68
TaqI TCGA 1 cut(s) 174
TasI AATT 1 cut(s) 82
TspDTI ATGAA 2 cut(s) 17, 203
VpaK11BI GGWCC 1 cut(s) 145
XcmI CCANNNNNNNNNTGG 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.