U4 U6.U5 tri-snRNP-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g26190 |
| rosa_chinensis | RchiOBHm_Chr1g0362531 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 228 |
| AgsI | TTSAA | 1 cut(s) | 150 |
| AluBI | AGCT | 3 cut(s) | 7, 109, 145 |
| AluI | AGCT | 3 cut(s) | 7, 109, 145 |
| Alw21I | GWGCWC | 1 cut(s) | 9 |
| ApeKI | GCWGC | 2 cut(s) | 56, 142 |
| AsuHPI | GGTGA | 1 cut(s) | 212 |
| BanII | GRGCYC | 1 cut(s) | 9 |
| BbsI | GAAGAC | 2 cut(s) | 53, 198 |
| Bbv12I | GWGCWC | 1 cut(s) | 9 |
| BbvI | GCAGC | 2 cut(s) | 68, 154 |
| BfaI | CTAG | 1 cut(s) | 224 |
| BisI | GCNGC | 3 cut(s) | 57, 143, 228 |
| BlsI | GCNGC | 3 cut(s) | 58, 144, 229 |
| BmsI | GCATC | 1 cut(s) | 146 |
| BpiI | GAAGAC | 2 cut(s) | 53, 198 |
| BsaBI | GATNNNNATC | 1 cut(s) | 216 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bse8I | GATNNNNATC | 1 cut(s) | 216 |
| BseGI | GGATG | 2 cut(s) | 208, 214 |
| BseJI | GATNNNNATC | 1 cut(s) | 216 |
| BseRI | GAGGAG | 1 cut(s) | 44 |
| BseXI | GCAGC | 2 cut(s) | 68, 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 9 |
| Bsp1286I | GDGCHC | 1 cut(s) | 9 |
| Bsp143I | GATC | 1 cut(s) | 102 |
| BspACI | CCGC | 1 cut(s) | 228 |
| BssMI | GATC | 1 cut(s) | 102 |
| BstF5I | GGATG | 2 cut(s) | 208, 214 |
| BstKTI | GATC | 1 cut(s) | 105 |
| BstMBI | GATC | 1 cut(s) | 102 |
| BstV1I | GCAGC | 2 cut(s) | 68, 154 |
| BstV2I | GAAGAC | 2 cut(s) | 53, 198 |
| BtgZI | GCGATG | 1 cut(s) | 123 |
| BtsCI | GGATG | 2 cut(s) | 208, 214 |
| CviAII | CATG | 2 cut(s) | 84, 245 |
| CviJI | RGCY | 4 cut(s) | 7, 109, 145, 227 |
| CviKI_1 | RGCY | 4 cut(s) | 7, 109, 145, 227 |
| DpnI | GATC | 1 cut(s) | 104 |
| DpnII | GATC | 1 cut(s) | 102 |
| Ecl136II | GAGCTC | 1 cut(s) | 7 |
| Eco24I | GRGCYC | 1 cut(s) | 9 |
| Eco53kI | GAGCTC | 1 cut(s) | 7 |
| EcoICRI | GAGCTC | 1 cut(s) | 7 |
| EcoT38I | GRGCYC | 1 cut(s) | 9 |
| FaeI | CATG | 2 cut(s) | 87, 248 |
| FaiI | YATR | 2 cut(s) | 85, 246 |
| FatI | CATG | 2 cut(s) | 83, 244 |
| Fnu4HI | GCNGC | 3 cut(s) | 57, 143, 228 |
| FokI | GGATG | 2 cut(s) | 215, 221 |
| FriOI | GRGCYC | 1 cut(s) | 9 |
| Fsp4HI | GCNGC | 3 cut(s) | 57, 143, 228 |
| FspBI | CTAG | 1 cut(s) | 224 |
| GluI | GCNGC | 3 cut(s) | 57, 143, 228 |
| Hin1II | CATG | 2 cut(s) | 87, 248 |
| HinfI | GANTC | 2 cut(s) | 94, 249 |
| HphI | GGTGA | 1 cut(s) | 212 |
| Hpy188III | TCNNGA | 1 cut(s) | 160 |
| HpyAV | CCTTC | 1 cut(s) | 19 |
| HpyCH4V | TGCA | 1 cut(s) | 265 |
| Hsp92II | CATG | 2 cut(s) | 87, 248 |
| Kzo9I | GATC | 1 cut(s) | 102 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| Lsp1109I | GCAGC | 2 cut(s) | 68, 154 |
| LweI | GCATC | 1 cut(s) | 146 |
| MaeI | CTAG | 1 cut(s) | 224 |
| MaeIII | GTNAC | 1 cut(s) | 12 |
| MalI | GATC | 1 cut(s) | 104 |
| MboI | GATC | 1 cut(s) | 102 |
| MboII | GAAGA | 2 cut(s) | 58, 203 |
| MhlI | GDGCHC | 1 cut(s) | 9 |
| MluCI | AATT | 1 cut(s) | 183 |
| MlyI | GAGTC | 1 cut(s) | 103 |
| MmeI | TCCRAC | 1 cut(s) | 157 |
| MnlI | CCTC | 3 cut(s) | 22, 193, 199 |
| MseI | TTAA | 1 cut(s) | 234 |
| NdeII | GATC | 1 cut(s) | 102 |
| NlaIII | CATG | 2 cut(s) | 87, 248 |
| PfeI | GAWTC | 1 cut(s) | 249 |
| PkrI | GCNGC | 3 cut(s) | 58, 144, 229 |
| PleI | GAGTC | 1 cut(s) | 102 |
| PpsI | GAGTC | 1 cut(s) | 102 |
| Psp124BI | GAGCTC | 1 cut(s) | 9 |
| SacI | GAGCTC | 1 cut(s) | 9 |
| SaqAI | TTAA | 1 cut(s) | 234 |
| SatI | GCNGC | 3 cut(s) | 57, 143, 228 |
| Sau3AI | GATC | 1 cut(s) | 102 |
| SchI | GAGTC | 1 cut(s) | 103 |
| SduI | GDGCHC | 1 cut(s) | 9 |
| SetI | ASST | 6 cut(s) | 9, 111, 147, 156, 225, 271 |
| SfaNI | GCATC | 1 cut(s) | 146 |
| SgeI | CNNG | 6 cut(s) | 22, 96, 118, 172, 236, 257 |
| SmlI | CTYRAG | 1 cut(s) | 8 |
| SmoI | CTYRAG | 1 cut(s) | 8 |
| Sse9I | AATT | 1 cut(s) | 183 |
| SsiI | CCGC | 1 cut(s) | 228 |
| SspMI | CTAG | 1 cut(s) | 224 |
| SstI | GAGCTC | 1 cut(s) | 9 |
| TaqI | TCGA | 4 cut(s) | 97, 105, 159, 252 |
| TasI | AATT | 1 cut(s) | 183 |
| TauI | GCSGC | 1 cut(s) | 230 |
| TfiI | GAWTC | 1 cut(s) | 249 |
| Tru1I | TTAA | 1 cut(s) | 234 |
| Tru9I | TTAA | 1 cut(s) | 234 |
| TseI | GCWGC | 2 cut(s) | 56, 142 |
| TspDTI | ATGAA | 1 cut(s) | 233 |
| XspI | CTAG | 1 cut(s) | 224 |