Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0026776

Physical Location & Seq

Genomic Coordinates Forward (+)

11443630 .. 11446198

Gene Structure 2569 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g12860.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGAAGCAGCAGACCTCATCATCGTCTGAGGCGGTGTCGTCGTTGTCGTCCTCCTCCTCCGCCGTATCCACTTCAGCTGACCATTCGCTGCCGTCATCGCCGAATTCGGGAGCCTCCGAAAAGTTTTCGTCGATACCGGCGGCGGCACCGGAGGACCTCGCTGTGGGGTCCAGGGACGGCAGCGGGGCACAGGAGAGCGTGACCGTCGATCGGCGGGTCGAGTACTCGGCGGTCTGCCGATGGACGGTCTCGAATTTTCCGAGAATCAAGGCTAGGGCACTGTGGAGCAATTACTTTGAGGTAGGGGGATACGATTGCCGGTTGCTAATATACCCTAAGGGTGACTCACAGGCGCTGCCGGGGTACATCTCGATATACCTCCAAATCATGGACCCGCGGGGCACGTCGTCGTCCAAATGGGACTGCTTCGCGAGTTACCGGCTCGCCATCGTTAACCTCGCCGACGATTCCAAGACCATTCATCGCGATTCTTGGCATCGGTTCTCGAGCAAGAAGAAATCTCACGGTTGGTGCGATTTTACGCCTTCTTCAACTGTCTTTGATTCGAAATTAGGTTATTTGTTCAATACCGACTCCGTTTTGATTACCGCCGATATCTTGATATTGAATGAGTCCGTTAATTTTACGCGAGATAGTAATAACAATAACAATGAGCTCCAATCGTCCGCCGGCTCGGTGATGTCTGGTTCCGCCGTGGCCGGACCGGTTTCGGATGTGTTGAGTGGCAAGTTCACGTGGAAAGTTCATAACTTTAGTTTGTTTAAGGAGATGATTAAGACTCAGAAGATAATGAGCCCGGTGTTTCCTGCTGGAGAGTGTAATTTGAGGATTAGTGTGTACCAGAGCTCGGTGAATGGCGTGGAGTATTTGTCAATGTGTTTGGAGAGCAAGGACACGGACAAGACGGTTGTGTTGTCTGATAGGAGTTGTTGGTGTTTGTTTCGAATGTCGGTGTTGAACCAGAAGCCTGCGACGAATCACATGCATAGGGACTCGTATGGGAGGTTTGCTGCCGATAATAAGAGTGGGGATAACACTAGTTTGGGGTGGAATGATTATATGAAGATGTCGGATTTTGTTGGGACTGAGTCGGGGTTTTTATTGGATGATACTGCAGTGTTTAGTACATCATTTCATGTGATAAAGGAATTTAGTAGCTTTTCGAAGAATGGAGGATTAATTACTGGGAGGAGTGGTAGTGGGGCAAGGAAGTTGGATGGTCACATTGGGAAATTCAATTGGAGGATTGAAAACTTCACTAGGTTGAAGGATATTTTAAAGAAGAGGAAGATAACAGGTCTTTGCATCAAGAGCAGGAGGTTTCAGATTGGAAATCGAGACTGTCGGCTCATAGTTTATCCCCGAGGGCAGTCTCAGCCACCATGCCACCTTTCAGTGTTTCTTGAAGTTACTGATTCACGGAATACTTCCAGTGACTGGAGTTGTTTTGTGAACCATCGTTTGTCGGTTGTTAACCAGAGGATGGAGGAGAAGTCTGTCACAAAGGAGTCTCAGAACCGCTACTCCAAAGCTGCAAAGGACTGGGGCTGGCGTGAATTTGTGACGCTTACTAGTTTATTTGATCAAGATTCAGGGTTTCTAGTTCAGGACACTGTTGTATTCTCCGCGGAGGTCCTTATATTGAAAGAGACATCAATAATGCAGGAGTTTACTGATCAGGATACTGAGTCAAGCAATGCTGGTTTGCAGATTGATAAGAACGGGAAAAGAAGTTCCTTCACATGGAAGGTGGAGAACTTCCTCTCTTTTAAGGAAATAATGGAGACTCGAAAAATCTTTAGCAAATTCTTCCAAGCTGGTGGATGTGAACTTCGAATTGGTATATATGAGTCCTTTGACACCATATGTATTTATTTGGAGAGTGACCAGTCAGTTGGTACTGATCATTACTTTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0030054 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FancD2 MATH

Protein Analysis

647

Amino Acids

72.25

Weight (kDa)

8.08

Isoelectric Point (pI)

45.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0026776)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25330
pyrus_communis	pycom08g12860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	145
AccB7I	CCANNNNNTGG	3 cut(s)	388, 1458, 1504
AccII	CGCG	5 cut(s)	397, 431, 486, 649, 1649
AcoI	YGGCCR	1 cut(s)	717
AcsI	RAATTY	6 cut(s)	103, 253, 1169, 1253, 1577, 1826
AcuI	CTGAAG	1 cut(s)	57
AcvI	CACGTG	1 cut(s)	756
AfaI	GTAC	5 cut(s)	224, 365, 860, 1147, 1921
AfiI	CCNNNNNNNGG	9 cut(s)	107, 163, 210, 244, 388, 868, 1458, 1504, 1764
AgeI	ACCGGT	1 cut(s)	724
AgsI	TTSAA	9 cut(s)	552, 586, 628, 979, 1258, 1271, 1288, 1427, 1666
AhlI	ACTAGT	2 cut(s)	1058, 1592
AjiI	CACGTC	1 cut(s)	405
AjnI	CCWGG	1 cut(s)	170
AjuI	GAANNNNNNNTTGG	2 cut(s)	1842, 1874
AloI	GAACNNNNNNTCC	4 cut(s)	1529, 1561, 1738, 1770
AluBI	AGCT	6 cut(s)	77, 676, 867, 1179, 1553, 1838
AluI	AGCT	6 cut(s)	77, 676, 867, 1179, 1553, 1838
Alw21I	GWGCWC	2 cut(s)	678, 869
Alw26I	GTCTC	6 cut(s)	253, 1353, 1398, 1536, 1664, 1799
AlwNI	CAGNNNCTG	2 cut(s)	355, 1458
Ama87I	CYCGRG	2 cut(s)	505, 1383
AoxI	GGCC	1 cut(s)	717
ApeKI	GCWGC	6 cut(s)	7, 88, 180, 355, 1031, 1553
ApoI	RAATTY	6 cut(s)	103, 253, 1169, 1253, 1577, 1826
AseI	ATTAAT	1 cut(s)	1199
AsiGI	ACCGGT	1 cut(s)	724
AspLEI	GCGC	1 cut(s)	355
AspS9I	GGNCC	5 cut(s)	154, 168, 391, 722, 1654
AsuC2I	CCSGG	2 cut(s)	360, 818
AsuHPI	GGTGA	3 cut(s)	353, 709, 883
AsuII	TTCGAA	4 cut(s)	566, 964, 1184, 1855
AvaI	CYCGRG	2 cut(s)	505, 1383
AvaII	GGWCC	5 cut(s)	154, 168, 391, 722, 1654
AxyI	CCTNAGG	1 cut(s)	336
BaeGI	GKGCMC	3 cut(s)	190, 280, 404
BaeI	ACNNNNGTAYC	2 cut(s)	1122, 1155
BanI	GGYRCC	1 cut(s)	145
BanII	GRGCYC	3 cut(s)	678, 818, 869
BbrPI	CACGTG	1 cut(s)	756
Bbv12I	GWGCWC	2 cut(s)	678, 869
BbvI	GCAGC	6 cut(s)	19, 75, 192, 342, 1018, 1540
BccI	CCATC	5 cut(s)	234, 455, 1232, 1485, 1498
BceAI	ACGGC	4 cut(s)	47, 76, 193, 698
BcgI	CGANNNNNNTGC	2 cut(s)	985, 1019
BciT130I	CCWGG	1 cut(s)	172
BciVI	GTATCC	3 cut(s)	76, 302, 1696
BclI	TGATCA	3 cut(s)	1603, 1696, 1924
BcnI	CCSGG	2 cut(s)	360, 818
BcoDI	GTCTC	6 cut(s)	253, 1353, 1398, 1536, 1664, 1799
BcuI	ACTAGT	2 cut(s)	1058, 1592
BfaI	CTAG	5 cut(s)	273, 1059, 1281, 1593, 1622
BfmI	CTRYAG	1 cut(s)	1134
BfoI	RGCGCY	1 cut(s)	356
BfuI	GTATCC	3 cut(s)	76, 302, 1696
BisI	GCNGC	8 cut(s)	8, 89, 141, 144, 181, 356, 1032, 1554
BlsI	GCNGC	8 cut(s)	9, 90, 142, 145, 182, 357, 1033, 1555
BmcAI	AGTACT	1 cut(s)	224
Bme1390I	CCNGG	3 cut(s)	172, 360, 818
Bme18I	GGWCC	5 cut(s)	154, 168, 391, 722, 1654
BmeT110I	CYCGRG	2 cut(s)	505, 1383
BmgBI	CACGTC	1 cut(s)	405
BmgT120I	GGNCC	5 cut(s)	154, 168, 391, 722, 1654
BmiI	GGNNCC	5 cut(s)	112, 147, 169, 393, 709
BmrFI	CCNGG	3 cut(s)	172, 360, 818
BmrI	ACTGGG	2 cut(s)	1215, 1573
BmsI	GCATC	2 cut(s)	505, 1335
BmuI	ACTGGG	2 cut(s)	1215, 1573
BpmI	CTGGAG	2 cut(s)	852, 1480
Bpu14I	TTCGAA	4 cut(s)	566, 964, 1184, 1855
BpuMI	CCSGG	2 cut(s)	360, 818
BsaAI	YACGTR	1 cut(s)	756
BsaI	GGTCTC	1 cut(s)	253
BsaJI	CCNNGG	6 cut(s)	171, 359, 395, 714, 1384, 1647
BsaWI	WCCGGW	2 cut(s)	148, 724
Bsc4I	CCNNNNNNNGG	9 cut(s)	107, 163, 210, 244, 388, 868, 1458, 1504, 1764
Bse118I	RCCGGY	5 cut(s)	136, 318, 438, 689, 724
Bse1I	ACTGG	5 cut(s)	1210, 1452, 1463, 1568, 1909
Bse21I	CCTNAGG	1 cut(s)	336
Bse3DI	GCAATG	1 cut(s)	1723
BseBI	CCWGG	1 cut(s)	172
BseDI	CCNNGG	6 cut(s)	171, 359, 395, 714, 1384, 1647
BseGI	GGATG	5 cut(s)	739, 1132, 1243, 1509, 1850
BseLI	CCNNNNNNNGG	9 cut(s)	107, 163, 210, 244, 388, 868, 1458, 1504, 1764
BseMI	GCAATG	1 cut(s)	1723
BseMII	CTCAG	6 cut(s)	18, 815, 1098, 1409, 1547, 1698
BseNI	ACTGG	5 cut(s)	1210, 1452, 1463, 1568, 1909
BseRI	GAGGAG	4 cut(s)	43, 46, 1225, 1523
BseSI	GKGCMC	3 cut(s)	190, 280, 404
BseXI	GCAGC	6 cut(s)	19, 75, 192, 342, 1018, 1540
Bsh1236I	CGCG	5 cut(s)	397, 431, 486, 649, 1649
Bsh1285I	CGRYCG	1 cut(s)	211
BshFI	GGCC	1 cut(s)	719
BshNI	GGYRCC	1 cut(s)	145
BshTI	ACCGGT	1 cut(s)	724
BsiEI	CGRYCG	1 cut(s)	211
BsiHKAI	GWGCWC	2 cut(s)	678, 869
BsiHKCI	CYCGRG	2 cut(s)	505, 1383
BsiSI	CCGG	9 cut(s)	137, 149, 319, 359, 439, 690, 720, 725, 818
BslFI	GGGAC	4 cut(s)	188, 434, 1025, 1117
BslI	CCNNNNNNNGG	9 cut(s)	107, 163, 210, 244, 388, 868, 1458, 1504, 1764
BsmAI	GTCTC	6 cut(s)	253, 1353, 1398, 1536, 1664, 1799
BsmFI	GGGAC	4 cut(s)	188, 434, 1025, 1117
BsnI	GGCC	1 cut(s)	719
Bso31I	GGTCTC	1 cut(s)	253
BsoBI	CYCGRG	2 cut(s)	505, 1383
Bsp119I	TTCGAA	4 cut(s)	566, 964, 1184, 1855
Bsp1286I	GDGCHC	6 cut(s)	190, 280, 404, 678, 818, 869
Bsp143I	GATC	4 cut(s)	208, 1603, 1696, 1924
Bsp68I	TCGCGA	2 cut(s)	431, 486
BspANI	GGCC	1 cut(s)	719
BspCNI	CTCAG	6 cut(s)	19, 814, 1099, 1408, 1546, 1699
BspFNI	CGCG	5 cut(s)	397, 431, 486, 649, 1649
BspLI	GGNNCC	5 cut(s)	112, 147, 169, 393, 709
BspMAI	CTGCAG	1 cut(s)	1138
BspT104I	TTCGAA	4 cut(s)	566, 964, 1184, 1855
BspT107I	GGYRCC	1 cut(s)	145
BspTNI	GGTCTC	1 cut(s)	253
BsrDI	GCAATG	1 cut(s)	1723
BsrFI	RCCGGY	5 cut(s)	136, 318, 438, 689, 724
BsrI	ACTGG	5 cut(s)	1210, 1452, 1463, 1568, 1909
BssAI	RCCGGY	5 cut(s)	136, 318, 438, 689, 724
BssECI	CCNNGG	6 cut(s)	171, 359, 395, 714, 1384, 1647
BssMI	GATC	4 cut(s)	208, 1603, 1696, 1924
Bst2UI	CCWGG	1 cut(s)	172
Bst4CI	ACNGT	8 cut(s)	205, 247, 282, 527, 556, 928, 1364, 1636
Bst6I	CTCTTC	1 cut(s)	1298
BstBAI	YACGTR	1 cut(s)	756
BstBI	TTCGAA	4 cut(s)	566, 964, 1184, 1855
BstC8I	GCNNGC	4 cut(s)	444, 691, 990, 1571
BstDEI	CTNAG	7 cut(s)	27, 336, 801, 1107, 1395, 1533, 1707
BstDSI	CCRYGG	3 cut(s)	395, 714, 1647
BstF5I	GGATG	5 cut(s)	739, 1132, 1243, 1509, 1850
BstFNI	CGCG	5 cut(s)	397, 431, 486, 649, 1649
BstH2I	RGCGCY	1 cut(s)	356
BstHHI	GCGC	1 cut(s)	355
BstKTI	GATC	4 cut(s)	211, 1606, 1699, 1927
BstMAI	GTCTC	6 cut(s)	253, 1353, 1398, 1536, 1664, 1799
BstMBI	GATC	4 cut(s)	208, 1603, 1696, 1924
BstMCI	CGRYCG	1 cut(s)	211
BstMWI	GCNNNNNNNGC	3 cut(s)	97, 1332, 1396
BstNI	CCWGG	1 cut(s)	172
BstNSI	RCATGY	1 cut(s)	1006
BstSCI	CCNGG	3 cut(s)	170, 358, 816
BstSFI	CTRYAG	1 cut(s)	1134
BstSLI	GKGCMC	3 cut(s)	190, 280, 404
BstUI	CGCG	5 cut(s)	397, 431, 486, 649, 1649
BstV1I	GCAGC	6 cut(s)	19, 75, 192, 342, 1018, 1540
BstXI	CCANNNNNNTGG	2 cut(s)	1841, 1916
Bsu36I	CCTNAGG	1 cut(s)	336
BsuI	GTATCC	3 cut(s)	76, 302, 1696
BsuRI	GGCC	1 cut(s)	719
BtgI	CCRYGG	3 cut(s)	395, 714, 1647
BtgZI	GCGATG	2 cut(s)	81, 467
BtrI	CACGTC	1 cut(s)	405
BtsCI	GGATG	5 cut(s)	739, 1132, 1243, 1509, 1850
BtsI	GCAGTG	1 cut(s)	1143
BtsIMutI	CAGTG	5 cut(s)	278, 1143, 1422, 1459, 1632
BtuMI	TCGCGA	2 cut(s)	431, 486
Cac8I	GCNNGC	4 cut(s)	444, 691, 990, 1571
CaiI	CAGNNNCTG	2 cut(s)	355, 1458
CfoI	GCGC	1 cut(s)	355
Cfr10I	RCCGGY	5 cut(s)	136, 318, 438, 689, 724
Cfr13I	GGNCC	5 cut(s)	154, 168, 391, 722, 1654
Cfr42I	CCGCGG	2 cut(s)	398, 1650
CpoI	CGGWCCG	1 cut(s)	722
CseI	GACGC	1 cut(s)	1594
Csp6I	GTAC	5 cut(s)	223, 364, 859, 1146, 1920
CspAI	ACCGGT	1 cut(s)	724
CspI	CGGWCCG	1 cut(s)	722
CviAII	CATG	5 cut(s)	388, 1003, 1157, 1404, 1764
CviQI	GTAC	5 cut(s)	223, 364, 859, 1146, 1920
DdeI	CTNAG	7 cut(s)	27, 336, 801, 1107, 1395, 1533, 1707
DpnI	GATC	4 cut(s)	210, 1605, 1698, 1926
DpnII	GATC	4 cut(s)	208, 1603, 1696, 1924
DraI	TTTAAA	1 cut(s)	1299
EaeI	YGGCCR	1 cut(s)	717
Eam1104I	CTCTTC	1 cut(s)	1298
EarI	CTCTTC	1 cut(s)	1298
EciI	GGCGGA	3 cut(s)	49, 676, 700
Ecl136II	GAGCTC	2 cut(s)	676, 867
Eco24I	GRGCYC	3 cut(s)	678, 818, 869
Eco31I	GGTCTC	1 cut(s)	253
Eco32I	GATATC	1 cut(s)	616
Eco47I	GGWCC	5 cut(s)	154, 168, 391, 722, 1654
Eco53kI	GAGCTC	2 cut(s)	676, 867
Eco57I	CTGAAG	1 cut(s)	57
Eco72I	CACGTG	1 cut(s)	756
Eco81I	CCTNAGG	1 cut(s)	336
Eco88I	CYCGRG	2 cut(s)	505, 1383
EcoICRI	GAGCTC	2 cut(s)	676, 867
EcoO109I	RGGNCCY	2 cut(s)	154, 1654
EcoRI	GAATTC	1 cut(s)	103
EcoRII	CCWGG	1 cut(s)	170
EcoRV	GATATC	1 cut(s)	616
EcoT22I	ATGCAT	1 cut(s)	1008
EcoT38I	GRGCYC	3 cut(s)	678, 818, 869
FaeI	CATG	5 cut(s)	391, 1006, 1160, 1407, 1767
FaqI	GGGAC	4 cut(s)	188, 434, 1025, 1117
FatI	CATG	5 cut(s)	387, 1002, 1156, 1403, 1763
FauI	CCCGC	4 cut(s)	176, 207, 390, 402
FauNDI	CATATG	1 cut(s)	1886
FbaI	TGATCA	3 cut(s)	1603, 1696, 1924
Fnu4HI	GCNGC	8 cut(s)	8, 89, 141, 144, 181, 356, 1032, 1554
FokI	GGATG	5 cut(s)	746, 1139, 1250, 1516, 1857
FriOI	GRGCYC	3 cut(s)	678, 818, 869
Fsp4HI	GCNGC	8 cut(s)	8, 89, 141, 144, 181, 356, 1032, 1554
FspBI	CTAG	5 cut(s)	273, 1059, 1281, 1593, 1622
GlaI	GCGC	1 cut(s)	354
GluI	GCNGC	8 cut(s)	8, 89, 141, 144, 181, 356, 1032, 1554
GsuI	CTGGAG	2 cut(s)	852, 1480
HaeII	RGCGCY	1 cut(s)	356
HaeIII	GGCC	1 cut(s)	719
HapII	CCGG	9 cut(s)	137, 149, 319, 359, 439, 690, 720, 725, 818
HgaI	GACGC	1 cut(s)	1594
HhaI	GCGC	1 cut(s)	355
Hin1II	CATG	5 cut(s)	391, 1006, 1160, 1407, 1767
Hin6I	GCGC	1 cut(s)	353
HinP1I	GCGC	1 cut(s)	353
HincII	GTYRAC	2 cut(s)	454, 1495
HindII	GTYRAC	2 cut(s)	454, 1495
HpaI	GTTAAC	2 cut(s)	454, 1495
HpaII	CCGG	9 cut(s)	137, 149, 319, 359, 439, 690, 720, 725, 818
HphI	GGTGA	3 cut(s)	353, 709, 883
Hpy166II	GTNNAC	7 cut(s)	454, 753, 859, 1474, 1495, 1692, 1850
Hpy188I	TCNGA	9 cut(s)	28, 118, 261, 733, 804, 940, 1093, 1347, 1536
Hpy8I	GTNNAC	7 cut(s)	454, 753, 859, 1474, 1495, 1692, 1850
Hpy99I	CGWCG	7 cut(s)	43, 133, 209, 409, 412, 467, 997
HpyAV	CCTTC	4 cut(s)	555, 1282, 1762, 1768
HpyCH4III	ACNGT	8 cut(s)	205, 247, 282, 527, 556, 928, 1364, 1636
HpyCH4IV	ACGT	2 cut(s)	404, 755
HpyCH4V	TGCA	6 cut(s)	1006, 1136, 1326, 1556, 1684, 1729
HpyF10VI	GCNNNNNNNGC	3 cut(s)	97, 1332, 1396
HpyF3I	CTNAG	7 cut(s)	27, 336, 801, 1107, 1395, 1533, 1707
HpySE526I	ACGT	2 cut(s)	404, 755
Hsp92II	CATG	5 cut(s)	391, 1006, 1160, 1407, 1767
HspAI	GCGC	1 cut(s)	353
KroI	GCCGGC	1 cut(s)	689
KroNI	GCCGGC	1 cut(s)	691
Ksp22I	TGATCA	3 cut(s)	1603, 1696, 1924
KspAI	GTTAAC	2 cut(s)	454, 1495
KspI	CCGCGG	2 cut(s)	398, 1650
Kzo9I	GATC	4 cut(s)	208, 1603, 1696, 1924
LmnI	GCTCC	3 cut(s)	110, 285, 681
Lsp1109I	GCAGC	6 cut(s)	19, 75, 192, 342, 1018, 1540
LweI	GCATC	2 cut(s)	505, 1335
MaeI	CTAG	5 cut(s)	273, 1059, 1281, 1593, 1622
MaeII	ACGT	2 cut(s)	404, 755
MaeIII	GTNAC	9 cut(s)	199, 341, 434, 1241, 1429, 1454, 1519, 1582, 1904
MalI	GATC	4 cut(s)	210, 1605, 1698, 1926
MboI	GATC	4 cut(s)	208, 1603, 1696, 1924
MboII	GAAGA	8 cut(s)	526, 540, 817, 1096, 1198, 1315, 1321, 1822
MfeI	CAATTG	1 cut(s)	1258
MhlI	GDGCHC	6 cut(s)	190, 280, 404, 678, 818, 869
MmeI	TCCRAC	2 cut(s)	1071, 1215
Mph1103I	ATGCAT	1 cut(s)	1008
MroNI	GCCGGC	1 cut(s)	689
MseI	TTAA	8 cut(s)	453, 639, 783, 795, 1199, 1298, 1494, 1791
MspA1I	CMGCKG	4 cut(s)	77, 183, 397, 1649
MspI	CCGG	9 cut(s)	137, 149, 319, 359, 439, 690, 720, 725, 818
MspR9I	CCNGG	3 cut(s)	172, 360, 818
MunI	CAATTG	1 cut(s)	1258
MvaI	CCWGG	1 cut(s)	172
MvnI	CGCG	5 cut(s)	397, 431, 486, 649, 1649
MwoI	GCNNNNNNNGC	3 cut(s)	97, 1332, 1396
NaeI	GCCGGC	1 cut(s)	691
NciI	CCSGG	2 cut(s)	360, 818
NdeI	CATATG	1 cut(s)	1886
NdeII	GATC	4 cut(s)	208, 1603, 1696, 1924
NgoMIV	GCCGGC	1 cut(s)	689
NlaIII	CATG	5 cut(s)	391, 1006, 1160, 1407, 1767
NlaIV	GGNNCC	5 cut(s)	112, 147, 169, 393, 709
NmeAIII	GCCGAG	1 cut(s)	206
NmuCI	GTSAC	7 cut(s)	199, 341, 1241, 1454, 1519, 1582, 1904
NruI	TCGCGA	2 cut(s)	431, 486
NsiI	ATGCAT	1 cut(s)	1008
NspI	RCATGY	1 cut(s)	1006
NspV	TTCGAA	4 cut(s)	566, 964, 1184, 1855
PaeR7I	CTCGAG	1 cut(s)	505
PcsI	WCGNNNNNNNCGW	3 cut(s)	44, 257, 531
PdiI	GCCGGC	1 cut(s)	691
PfeI	GAWTC	7 cut(s)	264, 467, 488, 563, 997, 1436, 1610
PflFI	GACNNNGTC	1 cut(s)	1108
PflMI	CCANNNNNTGG	3 cut(s)	388, 1458, 1504
PinAI	ACCGGT	1 cut(s)	724
PkrI	GCNGC	8 cut(s)	9, 90, 142, 145, 182, 357, 1033, 1555
Ple19I	CGATCG	1 cut(s)	211
PmaCI	CACGTG	1 cut(s)	756
PmlI	CACGTG	1 cut(s)	756
Ppu21I	YACGTR	1 cut(s)	756
PpuMI	RGGWCCY	2 cut(s)	154, 1654
PshBI	ATTAAT	1 cut(s)	1199
Psp124BI	GAGCTC	2 cut(s)	678, 869
Psp5II	RGGWCCY	2 cut(s)	154, 1654
Psp6I	CCWGG	1 cut(s)	170
PspCI	CACGTG	1 cut(s)	756
PspGI	CCWGG	1 cut(s)	170
PspN4I	GGNNCC	5 cut(s)	112, 147, 169, 393, 709
PspPI	GGNCC	5 cut(s)	154, 168, 391, 722, 1654
PspPPI	RGGWCCY	2 cut(s)	154, 1654
PstI	CTGCAG	1 cut(s)	1138
PstNI	CAGNNNCTG	2 cut(s)	355, 1458
PsyI	GACNNNGTC	1 cut(s)	1108
PvuI	CGATCG	1 cut(s)	211
PvuII	CAGCTG	1 cut(s)	77
RruI	TCGCGA	2 cut(s)	431, 486
RsaI	GTAC	5 cut(s)	224, 365, 860, 1147, 1921
RsaNI	GTAC	5 cut(s)	223, 364, 859, 1146, 1920
Rsr2I	CGGWCCG	1 cut(s)	722
RsrII	CGGWCCG	1 cut(s)	722
SacI	GAGCTC	2 cut(s)	678, 869
SacII	CCGCGG	2 cut(s)	398, 1650
SaqAI	TTAA	8 cut(s)	453, 639, 783, 795, 1199, 1298, 1494, 1791
SatI	GCNGC	8 cut(s)	8, 89, 141, 144, 181, 356, 1032, 1554
Sau3AI	GATC	4 cut(s)	208, 1603, 1696, 1924
Sau96I	GGNCC	5 cut(s)	154, 168, 391, 722, 1654
ScaI	AGTACT	1 cut(s)	224
ScrFI	CCNGG	3 cut(s)	172, 360, 818
SduI	GDGCHC	6 cut(s)	190, 280, 404, 678, 818, 869
SfaNI	GCATC	2 cut(s)	505, 1335
SfcI	CTRYAG	1 cut(s)	1134
Sfr274I	CTCGAG	1 cut(s)	505
Sfr303I	CCGCGG	2 cut(s)	398, 1650
SfuI	TTCGAA	4 cut(s)	566, 964, 1184, 1855
SgrBI	CCGCGG	2 cut(s)	398, 1650
SinI	GGWCC	5 cut(s)	154, 168, 391, 722, 1654
SlaI	CTCGAG	1 cut(s)	505
SmlI	CTYRAG	1 cut(s)	505
SmoI	CTYRAG	1 cut(s)	505
SpeI	ACTAGT	2 cut(s)	1058, 1592
SspMI	CTAG	5 cut(s)	273, 1059, 1281, 1593, 1622
SstI	GAGCTC	2 cut(s)	678, 869
StyD4I	CCNGG	3 cut(s)	170, 358, 816
TaaI	ACNGT	8 cut(s)	205, 247, 282, 527, 556, 928, 1364, 1636
TaiI	ACGT	2 cut(s)	407, 758
TatI	WGTACW	2 cut(s)	222, 1145
TauI	GCSGC	2 cut(s)	143, 146
TfiI	GAWTC	7 cut(s)	264, 467, 488, 563, 997, 1436, 1610
Tru1I	TTAA	8 cut(s)	453, 639, 783, 795, 1199, 1298, 1494, 1791
Tru9I	TTAA	8 cut(s)	453, 639, 783, 795, 1199, 1298, 1494, 1791
TscAI	CASTG	5 cut(s)	285, 1143, 1422, 1459, 1639
TseFI	GTSAC	7 cut(s)	199, 341, 1241, 1454, 1519, 1582, 1904
TseI	GCWGC	6 cut(s)	7, 88, 180, 355, 1031, 1553
Tsp45I	GTSAC	7 cut(s)	199, 341, 1241, 1454, 1519, 1582, 1904
TspDTI	ATGAA	5 cut(s)	17, 470, 755, 1097, 1145
TspGWI	ACGGA	4 cut(s)	586, 625, 932, 1456
TspRI	CASTG	5 cut(s)	285, 1143, 1422, 1459, 1639
Tth111I	GACNNNGTC	1 cut(s)	1108
Van91I	CCANNNNNTGG	3 cut(s)	388, 1458, 1504
VpaK11BI	GGWCC	5 cut(s)	154, 168, 391, 722, 1654
VspI	ATTAAT	1 cut(s)	1199
XapI	RAATTY	6 cut(s)	103, 253, 1169, 1253, 1577, 1826
XceI	RCATGY	1 cut(s)	1006
XhoI	CTCGAG	1 cut(s)	505
XspI	CTAG	5 cut(s)	273, 1059, 1281, 1593, 1622
ZrmI	AGTACT	1 cut(s)	224
Zsp2I	ATGCAT	1 cut(s)	1008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.