pycom08g17220

Pyruvate kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
17361734 .. 17363485
1752 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 285 bp
ATGCCGTTGATTTTACTAATTGAAGTATATAATTCCTTTCACACCCTCCAGGTATATATAGTGGCACGGTTTGATTTTTCATGGGGCGATGCTCAGTTTCACCAAGAGACGTTGGGAAACCTGAAGGTTGCAATGAAGAGTACCAATAAACTTTGTGCATTTGAGTCTACTGAGTTTTGCGGATTGACCCAGTTGCAATCATCTCTTCTGCAAGAACCTAAGAGAAAAAAGAATGAGCTTAAGAGTGCAATATCGTTGAAGATTAGCACTAAACAAGTTATGTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

95

Amino Acids

10.76

Weight (kDa)

9.0

Isoelectric Point (pI)

42.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028908)

Species Orthologous Gene IDs
malus_domestica MD11G1104800.v1.1
pyrus_communis pycom08g17220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 167
AciI CCGC 1 cut(s) 180
AcuI CTGAAG 1 cut(s) 143
AfaI GTAC 1 cut(s) 142
AflII CTTAAG 1 cut(s) 239
AgsI TTSAA 2 cut(s) 23, 259
AjnI CCWGG 1 cut(s) 48
AluBI AGCT 1 cut(s) 238
AluI AGCT 1 cut(s) 238
Alw26I GTCTC 1 cut(s) 101
AsuHPI GGTGA 1 cut(s) 92
BciT130I CCWGG 1 cut(s) 50
BcoDI GTCTC 1 cut(s) 101
BfrI CTTAAG 1 cut(s) 239
Bme1390I CCNGG 1 cut(s) 50
BmrFI CCNGG 1 cut(s) 50
BmrI ACTGGG 1 cut(s) 184
BmsI GCATC 1 cut(s) 79
BmuI ACTGGG 1 cut(s) 184
BpmI CTGGAG 1 cut(s) 32
Bse1I ACTGG 1 cut(s) 190
Bse3DI GCAATG 1 cut(s) 138
BseBI CCWGG 1 cut(s) 50
BseMI GCAATG 1 cut(s) 138
BseMII CTCAG 2 cut(s) 107, 162
BseNI ACTGG 1 cut(s) 190
BsmAI GTCTC 1 cut(s) 101
BsmBI CGTCTC 1 cut(s) 101
BspACI CCGC 1 cut(s) 180
BspCNI CTCAG 2 cut(s) 106, 163
BspTI CTTAAG 1 cut(s) 239
BsrDI GCAATG 1 cut(s) 138
BsrI ACTGG 1 cut(s) 190
Bst2UI CCWGG 1 cut(s) 50
Bst4CI ACNGT 1 cut(s) 69
Bst6I CTCTTC 2 cut(s) 131, 210
BstAFI CTTAAG 1 cut(s) 239
BstDEI CTNAG 3 cut(s) 93, 171, 219
BstMAI GTCTC 1 cut(s) 101
BstNI CCWGG 1 cut(s) 50
BstSCI CCNGG 1 cut(s) 48
BtgZI GCGATG 1 cut(s) 102
Csp6I GTAC 1 cut(s) 141
CviAII CATG 1 cut(s) 81
CviJI RGCY 1 cut(s) 238
CviKI_1 RGCY 1 cut(s) 238
CviQI GTAC 1 cut(s) 141
DdeI CTNAG 3 cut(s) 93, 171, 219
Eam1104I CTCTTC 2 cut(s) 131, 210
EarI CTCTTC 2 cut(s) 131, 210
Eco57I CTGAAG 1 cut(s) 143
EcoRII CCWGG 1 cut(s) 48
Esp3I CGTCTC 1 cut(s) 101
FaeI CATG 1 cut(s) 84
FaiI YATR 7 cut(s) 28, 30, 55, 57, 59, 82, 281
FatI CATG 1 cut(s) 80
FblI GTMKAC 1 cut(s) 167
GsuI CTGGAG 1 cut(s) 32
Hin1II CATG 1 cut(s) 84
HinfI GANTC 1 cut(s) 164
HphI GGTGA 1 cut(s) 92
Hpy166II GTNNAC 1 cut(s) 168
Hpy8I GTNNAC 1 cut(s) 168
HpyAV CCTTC 1 cut(s) 118
HpyCH4III ACNGT 1 cut(s) 69
HpyCH4IV ACGT 1 cut(s) 110
HpyCH4V TGCA 5 cut(s) 131, 158, 196, 211, 248
HpyF3I CTNAG 3 cut(s) 93, 171, 219
HpySE526I ACGT 1 cut(s) 110
Hsp92II CATG 1 cut(s) 84
LpnPI CCDG 4 cut(s) 35, 62, 134, 203
LweI GCATC 1 cut(s) 79
MaeII ACGT 1 cut(s) 110
MboII GAAGA 3 cut(s) 148, 197, 271
MluCI AATT 2 cut(s) 18, 31
MlyI GAGTC 1 cut(s) 173
MnlI CCTC 1 cut(s) 56
MseI TTAA 1 cut(s) 240
MspCI CTTAAG 1 cut(s) 239
MspR9I CCNGG 1 cut(s) 50
MvaI CCWGG 1 cut(s) 50
NlaIII CATG 1 cut(s) 84
PleI GAGTC 1 cut(s) 172
PpsI GAGTC 1 cut(s) 172
Psp6I CCWGG 1 cut(s) 48
PspGI CCWGG 1 cut(s) 48
RsaI GTAC 1 cut(s) 142
RsaNI GTAC 1 cut(s) 141
SaqAI TTAA 1 cut(s) 240
SchI GAGTC 1 cut(s) 173
ScrFI CCNGG 1 cut(s) 50
SetI ASST 6 cut(s) 54, 113, 123, 129, 220, 240
SfaNI GCATC 1 cut(s) 79
SgeI CNNG 8 cut(s) 61, 62, 78, 93, 116, 133, 202, 224
SmlI CTYRAG 1 cut(s) 239
SmoI CTYRAG 1 cut(s) 239
Sse9I AATT 2 cut(s) 18, 31
SsiI CCGC 1 cut(s) 180
StyD4I CCNGG 1 cut(s) 48
TaaI ACNGT 1 cut(s) 69
TaiI ACGT 1 cut(s) 113
TasI AATT 2 cut(s) 18, 31
Tru1I TTAA 1 cut(s) 240
Tru9I TTAA 1 cut(s) 240
TspDTI ATGAA 2 cut(s) 69, 149
Vha464I CTTAAG 1 cut(s) 239
XmiI GTMKAC 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.