pycom08g17680
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
17854637 .. 17854913
277 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 195 bp
ATGGCTGCAATGGAATCTCTCATTAGGGAAAGAGAGGCTAGACTTGAAATTGAGCAACAACAAAATTCCCTCTCATATGAGCACACGAGAGTTCAAAGAGAGCTTTCAAGTGCTACTCAAAAGGTAGGCTCCATGTGCAATTGTTCATTGCTATTTAGGCAATTTCCTGGAACATTGAGTAGAAAAACAAATTAG

Protein Analysis

65

Amino Acids

7.39

Weight (kDa)

8.84

Isoelectric Point (pI)

33.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0028285)

Species Orthologous Gene IDs
malus_domestica MD13G1005000.v1.1
pyrus_communis pycom08g17680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 64
AgsI TTSAA 3 cut(s) 47, 95, 108
AjnI CCWGG 1 cut(s) 166
AluBI AGCT 1 cut(s) 103
AluI AGCT 1 cut(s) 103
Alw21I GWGCWC 1 cut(s) 84
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 64
BauI CACGAG 1 cut(s) 85
Bbv12I GWGCWC 1 cut(s) 84
BciT130I CCWGG 1 cut(s) 168
BfaI CTAG 1 cut(s) 39
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
Bme1390I CCNGG 1 cut(s) 168
BmiI GGNNCC 1 cut(s) 130
BmrFI CCNGG 1 cut(s) 168
Bse3DI GCAATG 2 cut(s) 15, 146
BseBI CCWGG 1 cut(s) 168
BseMI GCAATG 2 cut(s) 15, 146
BsiHKAI GWGCWC 1 cut(s) 84
Bsp1286I GDGCHC 1 cut(s) 84
BspLI GGNNCC 1 cut(s) 130
BsrDI GCAATG 2 cut(s) 15, 146
BssSI CACGAG 1 cut(s) 85
Bst2BI CACGAG 1 cut(s) 85
Bst2UI CCWGG 1 cut(s) 168
BstMWI GCNNNNNNNGC 2 cut(s) 135, 157
BstNI CCWGG 1 cut(s) 168
BstSCI CCNGG 1 cut(s) 166
CviAII CATG 1 cut(s) 133
CviJI RGCY 4 cut(s) 5, 38, 103, 129
CviKI_1 RGCY 4 cut(s) 5, 38, 103, 129
EcoRII CCWGG 1 cut(s) 166
FaeI CATG 1 cut(s) 136
FaiI YATR 3 cut(s) 76, 78, 134
FatI CATG 1 cut(s) 132
FauNDI CATATG 1 cut(s) 76
Fnu4HI GCNGC 1 cut(s) 6
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 1 cut(s) 39
GluI GCNGC 1 cut(s) 6
Hin1II CATG 1 cut(s) 136
HinfI GANTC 1 cut(s) 14
HpyCH4V TGCA 2 cut(s) 8, 138
HpyF10VI GCNNNNNNNGC 2 cut(s) 135, 157
Hsp92II CATG 1 cut(s) 136
LmnI GCTCC 1 cut(s) 134
LpnPI CCDG 2 cut(s) 153, 180
MaeI CTAG 1 cut(s) 39
MfeI CAATTG 1 cut(s) 139
MhlI GDGCHC 1 cut(s) 84
MluCI AATT 5 cut(s) 48, 64, 139, 161, 190
MnlI CCTC 2 cut(s) 28, 80
MspR9I CCNGG 1 cut(s) 168
MunI CAATTG 1 cut(s) 139
MvaI CCWGG 1 cut(s) 168
MwoI GCNNNNNNNGC 2 cut(s) 135, 157
NdeI CATATG 1 cut(s) 76
NlaIII CATG 1 cut(s) 136
NlaIV GGNNCC 1 cut(s) 130
PfeI GAWTC 1 cut(s) 14
PfoI TCCNGGA 1 cut(s) 166
PkrI GCNGC 1 cut(s) 7
Psp6I CCWGG 1 cut(s) 166
PspGI CCWGG 1 cut(s) 166
PspN4I GGNNCC 1 cut(s) 130
SatI GCNGC 1 cut(s) 6
ScrFI CCNGG 1 cut(s) 168
SduI GDGCHC 1 cut(s) 84
SetI ASST 2 cut(s) 105, 126
SgeI CNNG 8 cut(s) 51, 56, 97, 99, 120, 145, 179, 180
Sse9I AATT 5 cut(s) 48, 64, 139, 161, 190
SspMI CTAG 1 cut(s) 39
StyD4I CCNGG 1 cut(s) 166
TasI AATT 5 cut(s) 48, 64, 139, 161, 190
TfiI GAWTC 1 cut(s) 14
TseI GCWGC 1 cut(s) 5
TspDTI ATGAA 1 cut(s) 135
XapI RAATTY 1 cut(s) 64
XspI CTAG 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.