Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom08g18500 pycom08g18510 pycom111g04970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 12 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 148 |
| AflIII | ACRYGT | 1 cut(s) | 120 |
| AjnI | CCWGG | 1 cut(s) | 275 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 83, 115 |
| AluBI | AGCT | 2 cut(s) | 309, 320 |
| AluI | AGCT | 2 cut(s) | 309, 320 |
| ApeKI | GCWGC | 1 cut(s) | 152 |
| AspLEI | GCGC | 1 cut(s) | 14 |
| AsuII | TTCGAA | 1 cut(s) | 102 |
| BaeGI | GKGCMC | 1 cut(s) | 276 |
| BbvI | GCAGC | 1 cut(s) | 164 |
| BciT130I | CCWGG | 1 cut(s) | 277 |
| BciVI | GTATCC | 2 cut(s) | 262, 297 |
| BfaI | CTAG | 1 cut(s) | 144 |
| BfuI | GTATCC | 2 cut(s) | 262, 297 |
| BisI | GCNGC | 1 cut(s) | 153 |
| BlsI | GCNGC | 1 cut(s) | 154 |
| Bme1390I | CCNGG | 1 cut(s) | 277 |
| BmrFI | CCNGG | 1 cut(s) | 277 |
| Bpu14I | TTCGAA | 1 cut(s) | 102 |
| BsaJI | CCNNGG | 2 cut(s) | 237, 275 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 148 |
| BseBI | CCWGG | 1 cut(s) | 277 |
| BseDI | CCNNGG | 2 cut(s) | 237, 275 |
| BseGI | GGATG | 1 cut(s) | 97 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 148 |
| BseSI | GKGCMC | 1 cut(s) | 276 |
| BseXI | GCAGC | 1 cut(s) | 164 |
| BsgI | GTGCAG | 1 cut(s) | 142 |
| Bsh1236I | CGCG | 1 cut(s) | 12 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 148 |
| Bsp119I | TTCGAA | 1 cut(s) | 102 |
| Bsp1286I | GDGCHC | 1 cut(s) | 276 |
| BspFNI | CGCG | 1 cut(s) | 12 |
| BspT104I | TTCGAA | 1 cut(s) | 102 |
| BssECI | CCNNGG | 2 cut(s) | 237, 275 |
| BssT1I | CCWWGG | 1 cut(s) | 237 |
| Bst2UI | CCWGG | 1 cut(s) | 277 |
| Bst4CI | ACNGT | 2 cut(s) | 259, 294 |
| BstBI | TTCGAA | 1 cut(s) | 102 |
| BstC8I | GCNNGC | 3 cut(s) | 16, 37, 157 |
| BstF5I | GGATG | 1 cut(s) | 97 |
| BstFNI | CGCG | 1 cut(s) | 12 |
| BstHHI | GCGC | 1 cut(s) | 14 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 165 |
| BstNI | CCWGG | 1 cut(s) | 277 |
| BstNSI | RCATGY | 1 cut(s) | 124 |
| BstSCI | CCNGG | 1 cut(s) | 275 |
| BstSLI | GKGCMC | 1 cut(s) | 276 |
| BstUI | CGCG | 1 cut(s) | 12 |
| BstV1I | GCAGC | 1 cut(s) | 164 |
| BsuI | GTATCC | 2 cut(s) | 262, 297 |
| BtsCI | GGATG | 1 cut(s) | 97 |
| Cac8I | GCNNGC | 3 cut(s) | 16, 37, 157 |
| CfoI | GCGC | 1 cut(s) | 14 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 96, 131 |
| CviAII | CATG | 1 cut(s) | 121 |
| CviJI | RGCY | 4 cut(s) | 23, 155, 309, 320 |
| CviKI_1 | RGCY | 4 cut(s) | 23, 155, 309, 320 |
| DraI | TTTAAA | 1 cut(s) | 223 |
| Eco130I | CCWWGG | 1 cut(s) | 237 |
| EcoRII | CCWGG | 1 cut(s) | 275 |
| EcoT14I | CCWWGG | 1 cut(s) | 237 |
| ErhI | CCWWGG | 1 cut(s) | 237 |
| FaeI | CATG | 1 cut(s) | 124 |
| FaiI | YATR | 5 cut(s) | 42, 44, 122, 126, 135 |
| FatI | CATG | 1 cut(s) | 120 |
| FauNDI | CATATG | 1 cut(s) | 42 |
| Fnu4HI | GCNGC | 1 cut(s) | 153 |
| FokI | GGATG | 1 cut(s) | 104 |
| Fsp4HI | GCNGC | 1 cut(s) | 153 |
| FspBI | CTAG | 1 cut(s) | 144 |
| GlaI | GCGC | 1 cut(s) | 13 |
| GluI | GCNGC | 1 cut(s) | 153 |
| HhaI | GCGC | 1 cut(s) | 14 |
| Hin1II | CATG | 1 cut(s) | 124 |
| Hin6I | GCGC | 1 cut(s) | 12 |
| HinP1I | GCGC | 1 cut(s) | 12 |
| HinfI | GANTC | 2 cut(s) | 57, 137 |
| Hpy166II | GTNNAC | 1 cut(s) | 118 |
| Hpy8I | GTNNAC | 1 cut(s) | 118 |
| HpyCH4III | ACNGT | 2 cut(s) | 259, 294 |
| HpyCH4V | TGCA | 3 cut(s) | 46, 65, 159 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 165 |
| Hsp92II | CATG | 1 cut(s) | 124 |
| HspAI | GCGC | 1 cut(s) | 12 |
| LmnI | GCTCC | 1 cut(s) | 229 |
| LpnPI | CCDG | 5 cut(s) | 169, 198, 262, 289, 295 |
| Lsp1109I | GCAGC | 1 cut(s) | 164 |
| MaeI | CTAG | 1 cut(s) | 144 |
| MaeIII | GTNAC | 2 cut(s) | 259, 294 |
| MhlI | GDGCHC | 1 cut(s) | 276 |
| MluCI | AATT | 1 cut(s) | 78 |
| MnlI | CCTC | 3 cut(s) | 13, 42, 68 |
| MseI | TTAA | 2 cut(s) | 69, 222 |
| MspR9I | CCNGG | 1 cut(s) | 277 |
| MvaI | CCWGG | 1 cut(s) | 277 |
| MvnI | CGCG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 165 |
| NdeI | CATATG | 1 cut(s) | 42 |
| NlaIII | CATG | 1 cut(s) | 124 |
| NspI | RCATGY | 1 cut(s) | 124 |
| NspV | TTCGAA | 1 cut(s) | 102 |
| PciI | ACATGT | 1 cut(s) | 120 |
| PfeI | GAWTC | 2 cut(s) | 57, 137 |
| PkrI | GCNGC | 1 cut(s) | 154 |
| PscI | ACATGT | 1 cut(s) | 120 |
| Psp6I | CCWGG | 1 cut(s) | 275 |
| PspGI | CCWGG | 1 cut(s) | 275 |
| SaqAI | TTAA | 2 cut(s) | 69, 222 |
| SatI | GCNGC | 1 cut(s) | 153 |
| ScrFI | CCNGG | 1 cut(s) | 277 |
| SduI | GDGCHC | 1 cut(s) | 276 |
| SetI | ASST | 2 cut(s) | 311, 322 |
| SfuI | TTCGAA | 1 cut(s) | 102 |
| Sse9I | AATT | 1 cut(s) | 78 |
| SspMI | CTAG | 1 cut(s) | 144 |
| StyD4I | CCNGG | 1 cut(s) | 275 |
| StyI | CCWWGG | 1 cut(s) | 237 |
| TaaI | ACNGT | 2 cut(s) | 259, 294 |
| TaqI | TCGA | 2 cut(s) | 102, 305 |
| TasI | AATT | 1 cut(s) | 78 |
| TfiI | GAWTC | 2 cut(s) | 57, 137 |
| Tru1I | TTAA | 2 cut(s) | 69, 222 |
| Tru9I | TTAA | 2 cut(s) | 69, 222 |
| TseI | GCWGC | 1 cut(s) | 152 |
| TspDTI | ATGAA | 2 cut(s) | 108, 150 |
| XceI | RCATGY | 1 cut(s) | 124 |
| XspI | CTAG | 1 cut(s) | 144 |