PAN-like domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom09g02470 |
| rosa_chinensis | RchiOBHm_Chr2g0160881 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 17 |
| AcsI | RAATTY | 1 cut(s) | 7 |
| AcuI | CTGAAG | 1 cut(s) | 74 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 23, 60 |
| AgsI | TTSAA | 1 cut(s) | 112 |
| AjnI | CCWGG | 1 cut(s) | 22 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 200, 232 |
| AluBI | AGCT | 2 cut(s) | 115, 127 |
| AluI | AGCT | 2 cut(s) | 115, 127 |
| Alw26I | GTCTC | 1 cut(s) | 165 |
| ApoI | RAATTY | 1 cut(s) | 7 |
| AspLEI | GCGC | 1 cut(s) | 164 |
| BciT130I | CCWGG | 1 cut(s) | 24 |
| BcoDI | GTCTC | 1 cut(s) | 165 |
| Bme1390I | CCNGG | 1 cut(s) | 24 |
| BmrFI | CCNGG | 1 cut(s) | 24 |
| BsaJI | CCNNGG | 1 cut(s) | 23 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 23, 60 |
| BseBI | CCWGG | 1 cut(s) | 24 |
| BseDI | CCNNGG | 1 cut(s) | 23 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 23, 60 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 23, 60 |
| BsmAI | GTCTC | 1 cut(s) | 165 |
| BsmBI | CGTCTC | 1 cut(s) | 165 |
| BspACI | CCGC | 1 cut(s) | 17 |
| BspHI | TCATGA | 1 cut(s) | 99 |
| BssECI | CCNNGG | 1 cut(s) | 23 |
| Bst2UI | CCWGG | 1 cut(s) | 24 |
| BstHHI | GCGC | 1 cut(s) | 164 |
| BstMAI | GTCTC | 1 cut(s) | 165 |
| BstNI | CCWGG | 1 cut(s) | 24 |
| BstSCI | CCNGG | 1 cut(s) | 22 |
| CciI | TCATGA | 1 cut(s) | 99 |
| CfoI | GCGC | 1 cut(s) | 164 |
| CviAII | CATG | 2 cut(s) | 100, 202 |
| CviJI | RGCY | 6 cut(s) | 53, 88, 115, 122, 127, 151 |
| CviKI_1 | RGCY | 6 cut(s) | 53, 88, 115, 122, 127, 151 |
| Eco57I | CTGAAG | 1 cut(s) | 74 |
| EcoRII | CCWGG | 1 cut(s) | 22 |
| Esp3I | CGTCTC | 1 cut(s) | 165 |
| FaeI | CATG | 2 cut(s) | 103, 205 |
| FaiI | YATR | 7 cut(s) | 56, 101, 119, 135, 195, 203, 239 |
| FatI | CATG | 2 cut(s) | 99, 201 |
| GlaI | GCGC | 1 cut(s) | 163 |
| HhaI | GCGC | 1 cut(s) | 164 |
| Hin1II | CATG | 2 cut(s) | 103, 205 |
| Hin6I | GCGC | 1 cut(s) | 162 |
| HinP1I | GCGC | 1 cut(s) | 162 |
| HindIII | AAGCTT | 1 cut(s) | 113 |
| HinfI | GANTC | 1 cut(s) | 208 |
| Hpy188I | TCNGA | 1 cut(s) | 257 |
| Hpy188III | TCNNGA | 3 cut(s) | 44, 92, 100 |
| Hsp92II | CATG | 2 cut(s) | 103, 205 |
| HspAI | GCGC | 1 cut(s) | 162 |
| LmnI | GCTCC | 1 cut(s) | 132 |
| LpnPI | CCDG | 4 cut(s) | 9, 36, 63, 77 |
| MboII | GAAGA | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 7 |
| MmeI | TCCRAC | 1 cut(s) | 154 |
| MspR9I | CCNGG | 1 cut(s) | 24 |
| MvaI | CCWGG | 1 cut(s) | 24 |
| NlaIII | CATG | 2 cut(s) | 103, 205 |
| NmeAIII | GCCGAG | 1 cut(s) | 224 |
| PagI | TCATGA | 1 cut(s) | 99 |
| PfeI | GAWTC | 1 cut(s) | 208 |
| Psp6I | CCWGG | 1 cut(s) | 22 |
| PspGI | CCWGG | 1 cut(s) | 22 |
| ScrFI | CCNGG | 1 cut(s) | 24 |
| SetI | ASST | 3 cut(s) | 65, 117, 129 |
| Sse9I | AATT | 1 cut(s) | 7 |
| SsiI | CCGC | 1 cut(s) | 17 |
| StyD4I | CCNGG | 1 cut(s) | 22 |
| TaqI | TCGA | 1 cut(s) | 206 |
| TasI | AATT | 1 cut(s) | 7 |
| TfiI | GAWTC | 1 cut(s) | 208 |
| TspDTI | ATGAA | 3 cut(s) | 88, 116, 190 |
| XapI | RAATTY | 1 cut(s) | 7 |