pycom09g17560

disulfide-isomerase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
18051010 .. 18053056
2047 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1746 bp
ATGCTCAAGTCTTTTTGGAATGCATCAACCATTACAAACTACATACTGGAGATTGAATTCTTGTGGGAAAAGGATATCAAAGTTGTTCTATGGGGAGGCAATGCTACTTCTTTAATTTTTTCAGCTTTGGAGTCTTGGCTTGTGGTAGAACACAATAAAAGGGACTTTGAGCAACAGTGGTCTCAGTGGTATTTCCCATATCAAAAAACTCAAGTGTCCATTTTAAAAGCTCAAGTGAAGTCAAGCTCTGTCTCCCCAAACTACATGGCTCACCAACCTGACATCAACAAGAAAATGAGGGAGATTCTTATTGACTGGCTTATTAAGGTCCACTACAAGTTTAAGTTTGTGGTTGAGACACAATTCCTTACCGTAAACCTTATAGACAGGTTCTTAGAGCGCCAAATGGTGATCAGAAAGAAGTTTCAATTGGTTGGTGTGACAACCATGTTATTAGCTTGCAAGTATAAGGATGTTTATGGAGAAATGCTTGACAAGGGAGTCAATTTGGATGAGTTTACCTATGTTTTGTTGACGGTGAAAAAAATCACTAGGGACATTCCGAGCTATCAGTTTATAATAAAGACGTTGACTGATGCTGGGAAACTCGATAAGGCGCTTAATGTGGTAGATACAATGCTGGATGATGATGGGGTTGAACTCTTTAACAATTCAAATAAGAAGGCTATGTTGTTTTTGAACTTCGCTAGTGAGTCTTCTGATGCTTTCAAATCCACATATCGTGAAGTTGCTAAGAAATATAAGAAAGAAGACATAAGCTTTCTCATTGGAGATCTCAAGGTCGTAGTCACTGACAGCATCCAGGAGGACATCAAGTATGGAAAATATGTGTTGCTGGAGTTCTATGCTCCTTGTTGTGGACATTGCAAGAAGCTTGTTCCAATTTTGGATGAAGTTGTTGTCTCATATGAAAAGGATTCCAATGTCGTTATTGCAAATTTACAGGCCACTGCAAATGGTGTGCCAAGTGACTTCGATGTCAAATATTATCACCTGCCTCAACGCCTAGTTGAACAGTGGAGGGGAGAACATCAACCGAGTGATTTAGAGAATAAAAATATGGAATGCGCCAATTGGTTGTTGTGTGCTAAGCCTCTCGGCATGGAGACTGAGAGAACGATTGTAGAACAAATTCAAGGTTATACTGAACCATACGCAGAGAAGCTTCTTCCAAATTTGCATTCCATGAAGAAACATGTTTTTTCCCCCGTACTAGATTTCCAGAAGGTATTACTGCACTATTTTAGGATGCGAGAAAAGGGCTGGCAGACTATCAAAAAAGATAGAGTTTATGCCTTCTTGGAACATCCTGCTCAGTTTTATGAAATCATTGTTTATTCAGACTACTCATATATGGATGTAGATCCTATAATGCCTATAATGGAGAGATTGGACACTAAGCATTATGTAACATATAAGCTGGGAAAGGCTGCCACTATGTATCAGATCGCAGAAGAGACTTATACCACCCAGACTGCTTCATTGGAAACTGCTATGTCTACACTTGTCTTCGTTCAAGGATCTCTGAATTTTGTGTGCAATCGGTATCAACTGCTCATGTTGGCAATAATGTATACTGCTGATGAGGATTTGGAGTCCATAACCGACACACAAATTGAATTACAGCTAATGGAGTTAGATGCTCACAATTTTGTCAAATTCAAAGTGCAGAACAGTCACTACCCCAATGAACCATTGCAGAAAGAAAGCAAGTTCTTTTTTTAA

Protein Analysis

582

Amino Acids

67.96

Weight (kDa)

5.89

Isoelectric Point (pI)

33.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_5 PF05631 30 - 64 6.4e-09 Sugar-tranasporters, 12 TM
Cyclin_N PF00134 76 - 169 3.2e-28 Cyclin, N-terminal domain
Thioredoxin PF00085 268 - 337 7.3e-11 Thioredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0028376)

Species Orthologous Gene IDs
malus_domestica MD15G1341900.v1.1
pyrus_communis pycom09g17560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 578
AarI CACCTGC 1 cut(s) 1023
AasI GACNNNNNNGTC 2 cut(s) 500, 998
Acc36I ACCTGC 1 cut(s) 1023
AccI GTMKAC 2 cut(s) 1520, 1595
AclWI GGATC 2 cut(s) 1379, 1549
AcsI RAATTY 6 cut(s) 56, 958, 1152, 1195, 1549, 1679
AfaI GTAC 1 cut(s) 1233
AfiI CCNNNNNNNGG 1 cut(s) 878
AflIII ACRYGT 1 cut(s) 1216
AjnI CCWGG 1 cut(s) 822
AjuI GAANNNNNNNTTGG 4 cut(s) 413, 445, 1186, 1218
Alw26I GTCTC 6 cut(s) 186, 256, 350, 928, 1121, 1472
AlwI GGATC 2 cut(s) 1379, 1549
AoxI GGCC 1 cut(s) 966
ApeKI GCWGC 1 cut(s) 1451
ApoI RAATTY 6 cut(s) 56, 958, 1152, 1195, 1549, 1679
Asp700I GAANNNNTTC 1 cut(s) 1152
AspLEI GCGC 3 cut(s) 402, 619, 1091
AspS9I GGNCC 1 cut(s) 328
AsuHPI GGTGA 4 cut(s) 263, 421, 550, 1004
AvaII GGWCC 1 cut(s) 328
BbsI GAAGAC 3 cut(s) 708, 777, 1522
BbvI GCAGC 1 cut(s) 1438
BccI CCATC 1 cut(s) 644
BciT130I CCWGG 1 cut(s) 824
BclI TGATCA 1 cut(s) 411
BcoDI GTCTC 6 cut(s) 186, 256, 350, 928, 1121, 1472
BfaI CTAG 4 cut(s) 552, 708, 1028, 1235
BfoI RGCGCY 2 cut(s) 403, 620
BfuAI ACCTGC 1 cut(s) 1023
BglII AGATCT 1 cut(s) 793
BisI GCNGC 1 cut(s) 1452
BlpI GCTNAGC 1 cut(s) 1110
BlsI GCNGC 1 cut(s) 1453
Bme1390I CCNGG 1 cut(s) 824
Bme18I GGWCC 1 cut(s) 328
BmgT120I GGNCC 1 cut(s) 328
BmrFI CCNGG 1 cut(s) 824
BmsI GCATC 6 cut(s) 32, 586, 712, 828, 1260, 1651
BpiI GAAGAC 3 cut(s) 708, 777, 1522
BpmI CTGGAG 2 cut(s) 68, 878
Bpu1102I GCTNAGC 1 cut(s) 1110
BpuEI CTTGAG 3 cut(s) 195, 216, 782
BsaBI GATNNNNATC 1 cut(s) 1383
BsaI GGTCTC 1 cut(s) 186
Bsc4I CCNNNNNNNGG 1 cut(s) 878
Bse1I ACTGG 2 cut(s) 51, 320
Bse3DI GCAATG 3 cut(s) 106, 883, 1715
Bse8I GATNNNNATC 1 cut(s) 1383
BseBI CCWGG 1 cut(s) 824
BseGI GGATG 8 cut(s) 478, 517, 649, 819, 916, 1275, 1327, 1384
BseJI GATNNNNATC 1 cut(s) 1383
BseLI CCNNNNNNNGG 1 cut(s) 878
BseMI GCAATG 3 cut(s) 106, 883, 1715
BseMII CTCAG 3 cut(s) 197, 1122, 1349
BseNI ACTGG 2 cut(s) 51, 320
BseXI GCAGC 1 cut(s) 1438
BseYI CCCAGC 2 cut(s) 599, 1441
BsgI GTGCAG 2 cut(s) 1241, 1709
BshFI GGCC 1 cut(s) 968
BslFI GGGAC 2 cut(s) 176, 569
BslI CCNNNNNNNGG 1 cut(s) 878
BsmAI GTCTC 6 cut(s) 186, 256, 350, 928, 1121, 1472
BsmFI GGGAC 2 cut(s) 176, 569
BsmI GAATGC 3 cut(s) 25, 1091, 1201
BsnI GGCC 1 cut(s) 968
Bso31I GGTCTC 1 cut(s) 186
Bsp143I GATC 5 cut(s) 411, 793, 1384, 1467, 1541
Bsp1720I GCTNAGC 1 cut(s) 1110
BspANI GGCC 1 cut(s) 968
BspCNI CTCAG 3 cut(s) 196, 1123, 1348
BspMI ACCTGC 1 cut(s) 1023
BspPI GGATC 2 cut(s) 1379, 1549
BspTNI GGTCTC 1 cut(s) 186
BsrDI GCAATG 3 cut(s) 106, 883, 1715
BsrI ACTGG 2 cut(s) 51, 320
BssMI GATC 5 cut(s) 411, 793, 1384, 1467, 1541
BssNAI GTATAC 1 cut(s) 1596
Bst1107I GTATAC 1 cut(s) 1596
Bst2UI CCWGG 1 cut(s) 824
Bst4CI ACNGT 5 cut(s) 177, 373, 538, 1038, 1697
Bst6I CTCTTC 1 cut(s) 1470
BstC8I GCNNGC 2 cut(s) 460, 1286
BstDEI CTNAG 7 cut(s) 183, 394, 753, 1110, 1131, 1335, 1419
BstF5I GGATG 8 cut(s) 478, 517, 649, 819, 916, 1275, 1327, 1384
BstH2I RGCGCY 2 cut(s) 403, 620
BstHHI GCGC 3 cut(s) 402, 619, 1091
BstKTI GATC 5 cut(s) 414, 796, 1387, 1470, 1544
BstMAI GTCTC 6 cut(s) 186, 256, 350, 928, 1121, 1472
BstMBI GATC 5 cut(s) 411, 793, 1384, 1467, 1541
BstNI CCWGG 1 cut(s) 824
BstNSI RCATGY 1 cut(s) 1220
BstSCI CCNGG 1 cut(s) 822
BstV1I GCAGC 1 cut(s) 1438
BstV2I GAAGAC 3 cut(s) 708, 777, 1522
BstX2I RGATCY 3 cut(s) 793, 1384, 1541
BstYI RGATCY 3 cut(s) 793, 1384, 1541
BstZ17I GTATAC 1 cut(s) 1596
BsuRI GGCC 1 cut(s) 968
BtsCI GGATG 8 cut(s) 478, 517, 649, 819, 916, 1275, 1327, 1384
BtsI GCAGTG 1 cut(s) 969
BtsIMutI CAGTG 5 cut(s) 182, 191, 810, 969, 1043
BveI ACCTGC 1 cut(s) 1023
Cac8I GCNNGC 2 cut(s) 460, 1286
CfoI GCGC 3 cut(s) 402, 619, 1091
Cfr13I GGNCC 1 cut(s) 328
Csp6I GTAC 1 cut(s) 1232
CviAII CATG 6 cut(s) 265, 448, 1123, 1207, 1217, 1579
CviQI GTAC 1 cut(s) 1232
DdeI CTNAG 7 cut(s) 183, 394, 753, 1110, 1131, 1335, 1419
DpnI GATC 5 cut(s) 413, 795, 1386, 1469, 1543
DpnII GATC 5 cut(s) 411, 793, 1384, 1467, 1541
DraI TTTAAA 1 cut(s) 225
DrdI GACNNNNNNGTC 2 cut(s) 500, 998
DseDI GACNNNNNNGTC 2 cut(s) 500, 998
Eam1104I CTCTTC 1 cut(s) 1470
EarI CTCTTC 1 cut(s) 1470
Eco31I GGTCTC 1 cut(s) 186
Eco32I GATATC 1 cut(s) 76
Eco47I GGWCC 1 cut(s) 328
EcoRI GAATTC 1 cut(s) 56
EcoRII CCWGG 1 cut(s) 822
EcoRV GATATC 1 cut(s) 76
EcoT22I ATGCAT 1 cut(s) 25
FaeI CATG 6 cut(s) 268, 451, 1126, 1210, 1220, 1582
FaqI GGGAC 2 cut(s) 176, 569
FatI CATG 6 cut(s) 264, 447, 1122, 1206, 1216, 1578
FauNDI CATATG 1 cut(s) 928
FbaI TGATCA 1 cut(s) 411
FblI GTMKAC 2 cut(s) 1520, 1595
Fnu4HI GCNGC 1 cut(s) 1452
FokI GGATG 8 cut(s) 485, 524, 656, 806, 923, 1282, 1314, 1391
Fsp4HI GCNGC 1 cut(s) 1452
FspBI CTAG 4 cut(s) 552, 708, 1028, 1235
GlaI GCGC 3 cut(s) 401, 618, 1090
GluI GCNGC 1 cut(s) 1452
GsaI CCCAGC 2 cut(s) 603, 1445
GsuI CTGGAG 2 cut(s) 68, 878
HaeII RGCGCY 2 cut(s) 403, 620
HaeIII GGCC 1 cut(s) 968
HhaI GCGC 3 cut(s) 402, 619, 1091
Hin1II CATG 6 cut(s) 268, 451, 1126, 1210, 1220, 1582
Hin6I GCGC 3 cut(s) 400, 617, 1089
HinP1I GCGC 3 cut(s) 400, 617, 1089
HincII GTYRAC 2 cut(s) 534, 591
HindII GTYRAC 2 cut(s) 534, 591
HindIII AAGCTT 3 cut(s) 778, 893, 1184
HinfI GANTC 6 cut(s) 131, 304, 501, 713, 938, 1616
HphI GGTGA 4 cut(s) 263, 421, 550, 1004
Hpy166II GTNNAC 8 cut(s) 331, 376, 519, 534, 591, 881, 1521, 1596
Hpy188I TCNGA 6 cut(s) 416, 564, 721, 1363, 1467, 1548
Hpy188III TCNNGA 2 cut(s) 743, 1243
Hpy8I GTNNAC 8 cut(s) 331, 376, 519, 534, 591, 881, 1521, 1596
HpyAV CCTTC 3 cut(s) 676, 1240, 1327
HpyCH4III ACNGT 5 cut(s) 177, 373, 538, 1038, 1697
HpyCH4IV ACGT 1 cut(s) 587
HpyF3I CTNAG 7 cut(s) 183, 394, 753, 1110, 1131, 1335, 1419
HpySE526I ACGT 1 cut(s) 587
Hsp92II CATG 6 cut(s) 268, 451, 1126, 1210, 1220, 1582
HspAI GCGC 3 cut(s) 400, 617, 1089
Ksp22I TGATCA 1 cut(s) 411
Kzo9I GATC 5 cut(s) 411, 793, 1384, 1467, 1541
LmnI GCTCC 1 cut(s) 874
Lsp1109I GCAGC 1 cut(s) 1438
LweI GCATC 6 cut(s) 32, 586, 712, 828, 1260, 1651
MaeI CTAG 4 cut(s) 552, 708, 1028, 1235
MaeII ACGT 1 cut(s) 587
MaeIII GTNAC 5 cut(s) 439, 808, 989, 1429, 1697
MalI GATC 5 cut(s) 413, 795, 1386, 1469, 1543
MboI GATC 5 cut(s) 411, 793, 1384, 1467, 1541
MboII GAAGA 6 cut(s) 708, 782, 1181, 1222, 1487, 1522
MfeI CAATTG 2 cut(s) 428, 1093
MflI RGATCY 3 cut(s) 793, 1384, 1541
MlyI GAGTC 4 cut(s) 140, 510, 722, 1625
MnlI CCTC 7 cut(s) 89, 291, 820, 1029, 1035, 1125, 1600
Mph1103I ATGCAT 1 cut(s) 25
MroXI GAANNNNTTC 1 cut(s) 1152
MseI TTAA 7 cut(s) 113, 224, 324, 342, 621, 666, 1744
MspR9I CCNGG 1 cut(s) 824
MunI CAATTG 2 cut(s) 428, 1093
Mva1269I GAATGC 3 cut(s) 25, 1091, 1201
MvaI CCWGG 1 cut(s) 824
NdeI CATATG 1 cut(s) 928
NdeII GATC 5 cut(s) 411, 793, 1384, 1467, 1541
NlaIII CATG 6 cut(s) 268, 451, 1126, 1210, 1220, 1582
NmeAIII GCCGAG 1 cut(s) 1098
NmuCI GTSAC 4 cut(s) 439, 808, 989, 1697
NsiI ATGCAT 1 cut(s) 25
NspI RCATGY 1 cut(s) 1220
PaqCI CACCTGC 1 cut(s) 1023
PciI ACATGT 1 cut(s) 1216
PctI GAATGC 3 cut(s) 25, 1091, 1201
PdmI GAANNNNTTC 1 cut(s) 1152
PfeI GAWTC 2 cut(s) 304, 938
PfoI TCCNGGA 1 cut(s) 822
PkrI GCNGC 1 cut(s) 1453
PleI GAGTC 4 cut(s) 139, 509, 721, 1624
PpsI GAGTC 4 cut(s) 139, 509, 721, 1624
PscI ACATGT 1 cut(s) 1216
PsiI TTATAA 1 cut(s) 578
Psp6I CCWGG 1 cut(s) 822
PspFI CCCAGC 2 cut(s) 599, 1441
PspGI CCWGG 1 cut(s) 822
PspPI GGNCC 1 cut(s) 328
PsrI GAACNNNNNNTAC 2 cut(s) 1685, 1717
PsuI RGATCY 3 cut(s) 793, 1384, 1541
RsaI GTAC 1 cut(s) 1233
RsaNI GTAC 1 cut(s) 1232
SaqAI TTAA 7 cut(s) 113, 224, 324, 342, 621, 666, 1744
SatI GCNGC 1 cut(s) 1452
Sau3AI GATC 5 cut(s) 411, 793, 1384, 1467, 1541
Sau96I GGNCC 1 cut(s) 328
SchI GAGTC 4 cut(s) 140, 510, 722, 1625
ScrFI CCNGG 1 cut(s) 824
SfaNI GCATC 6 cut(s) 32, 586, 712, 828, 1260, 1651
SinI GGWCC 1 cut(s) 328
SmlI CTYRAG 4 cut(s) 5, 210, 231, 797
SmoI CTYRAG 4 cut(s) 5, 210, 231, 797
SspI AATATT 1 cut(s) 1007
SspMI CTAG 4 cut(s) 552, 708, 1028, 1235
StyD4I CCNGG 1 cut(s) 822
TaaI ACNGT 5 cut(s) 177, 373, 538, 1038, 1697
TaiI ACGT 1 cut(s) 590
TaqI TCGA 2 cut(s) 609, 996
TfiI GAWTC 2 cut(s) 304, 938
Tru1I TTAA 7 cut(s) 113, 224, 324, 342, 621, 666, 1744
Tru9I TTAA 7 cut(s) 113, 224, 324, 342, 621, 666, 1744
TscAI CASTG 5 cut(s) 182, 191, 817, 976, 1043
TseFI GTSAC 4 cut(s) 439, 808, 989, 1697
TseI GCWGC 1 cut(s) 1451
Tsp45I GTSAC 4 cut(s) 439, 808, 989, 1697
TspDTI ATGAA 6 cut(s) 927, 945, 1223, 1359, 1491, 1725
TspRI CASTG 5 cut(s) 182, 191, 817, 976, 1043
VpaK11BI GGWCC 1 cut(s) 328
XapI RAATTY 6 cut(s) 56, 958, 1152, 1195, 1549, 1679
XceI RCATGY 1 cut(s) 1220
XmiI GTMKAC 2 cut(s) 1520, 1595
XmnI GAANNNNTTC 1 cut(s) 1152
XspI CTAG 4 cut(s) 552, 708, 1028, 1235
Zsp2I ATGCAT 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.