pycom10g27130

Argonaute

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
28200018 .. 28200521
504 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 294 bp
ATGACAAATTCTTCTTCTTCTCCATTTGGAACTTGTGGCGGTGACCAACCATTTCAGAATGCAAGCCCTGGGAGGGGCTCAGAGCATGTTGGGAGTGAGGGAGACAGGAAGAGAGTTGAGAAGCAATTTCATTCCAAAACGTTAAAGGTGCAGGTCAACCTTGAGACTATAATCCCAATGAAAGGAATTGTGGTTGAGTTTCTTATTAGTTTACCTATCAGTTTTGATTCCTCTTCATTGGAAGCAGTGAGGGTTCTTGAGATCATCCCAAGGCAGAATATAGCAAAACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

98

Amino Acids

10.58

Weight (kDa)

7.93

Isoelectric Point (pI)

47.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0028187)

Species Orthologous Gene IDs
malus_domestica MD10G1320700.v1.1
pyrus_communis pycom10g27130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 142
AciI CCGC 1 cut(s) 39
AclI AACGTT 1 cut(s) 140
AcsI RAATTY 1 cut(s) 7
AfiI CCNNNNNNNGG 3 cut(s) 73, 74, 182
AjnI CCWGG 1 cut(s) 67
Alw26I GTCTC 2 cut(s) 96, 158
ApoI RAATTY 1 cut(s) 7
AsuHPI GGTGA 1 cut(s) 53
BanII GRGCYC 1 cut(s) 80
BciT130I CCWGG 1 cut(s) 69
BcoDI GTCTC 2 cut(s) 96, 158
BfuAI ACCTGC 1 cut(s) 142
Bme1390I CCNGG 1 cut(s) 69
BmrFI CCNGG 1 cut(s) 69
BpuEI CTTGAG 2 cut(s) 182, 278
BsaJI CCNNGG 3 cut(s) 67, 68, 269
Bsc4I CCNNNNNNNGG 3 cut(s) 73, 74, 182
BseBI CCWGG 1 cut(s) 69
BseDI CCNNGG 3 cut(s) 67, 68, 269
BseGI GGATG 1 cut(s) 264
BseLI CCNNNNNNNGG 3 cut(s) 73, 74, 182
BseMII CTCAG 1 cut(s) 93
BsgI GTGCAG 1 cut(s) 170
BslI CCNNNNNNNGG 3 cut(s) 73, 74, 182
BsmAI GTCTC 2 cut(s) 96, 158
BsmI GAATGC 1 cut(s) 64
Bsp1286I GDGCHC 1 cut(s) 80
Bsp143I GATC 1 cut(s) 261
BspACI CCGC 1 cut(s) 39
BspCNI CTCAG 1 cut(s) 92
BspMI ACCTGC 1 cut(s) 142
BssECI CCNNGG 3 cut(s) 67, 68, 269
BssMI GATC 1 cut(s) 261
BssT1I CCWWGG 1 cut(s) 269
Bst2UI CCWGG 1 cut(s) 69
Bst4CI ACNGT 1 cut(s) 291
Bst6I CTCTTC 2 cut(s) 104, 238
BstC8I GCNNGC 1 cut(s) 64
BstDEI CTNAG 1 cut(s) 79
BstEII GGTNACC 1 cut(s) 41
BstF5I GGATG 1 cut(s) 264
BstKTI GATC 1 cut(s) 264
BstMAI GTCTC 2 cut(s) 96, 158
BstMBI GATC 1 cut(s) 261
BstNI CCWGG 1 cut(s) 69
BstNSI RCATGY 1 cut(s) 89
BstPI GGTNACC 1 cut(s) 41
BstSCI CCNGG 1 cut(s) 67
BtsCI GGATG 1 cut(s) 264
BtsI GCAGTG 1 cut(s) 252
BtsIMutI CAGTG 1 cut(s) 252
BveI ACCTGC 1 cut(s) 142
Cac8I GCNNGC 1 cut(s) 64
CviAII CATG 1 cut(s) 86
CviJI RGCY 2 cut(s) 66, 78
CviKI_1 RGCY 2 cut(s) 66, 78
DdeI CTNAG 1 cut(s) 79
DpnI GATC 1 cut(s) 263
DpnII GATC 1 cut(s) 261
Eam1104I CTCTTC 2 cut(s) 104, 238
EarI CTCTTC 2 cut(s) 104, 238
Eco130I CCWWGG 1 cut(s) 269
Eco24I GRGCYC 1 cut(s) 80
Eco91I GGTNACC 1 cut(s) 41
EcoO65I GGTNACC 1 cut(s) 41
EcoRII CCWGG 1 cut(s) 67
EcoT14I CCWWGG 1 cut(s) 269
EcoT38I GRGCYC 1 cut(s) 80
ErhI CCWWGG 1 cut(s) 269
FaeI CATG 1 cut(s) 89
FaiI YATR 3 cut(s) 87, 170, 281
FatI CATG 1 cut(s) 85
FokI GGATG 1 cut(s) 251
FriOI GRGCYC 1 cut(s) 80
Hin1II CATG 1 cut(s) 89
HincII GTYRAC 1 cut(s) 157
HindII GTYRAC 1 cut(s) 157
HinfI GANTC 1 cut(s) 227
HphI GGTGA 1 cut(s) 53
Hpy166II GTNNAC 2 cut(s) 157, 212
Hpy188I TCNGA 2 cut(s) 57, 82
Hpy188III TCNNGA 1 cut(s) 257
Hpy8I GTNNAC 2 cut(s) 157, 212
HpyCH4III ACNGT 1 cut(s) 291
HpyCH4IV ACGT 1 cut(s) 140
HpyCH4V TGCA 2 cut(s) 62, 151
HpyF3I CTNAG 1 cut(s) 79
HpySE526I ACGT 1 cut(s) 140
Hsp92II CATG 1 cut(s) 89
Kzo9I GATC 1 cut(s) 261
LpnPI CCDG 4 cut(s) 54, 81, 91, 137
MaeII ACGT 1 cut(s) 140
MaeIII GTNAC 1 cut(s) 41
MalI GATC 1 cut(s) 263
MboI GATC 1 cut(s) 261
MboII GAAGA 5 cut(s) 3, 6, 9, 121, 225
MhlI GDGCHC 1 cut(s) 80
MluCI AATT 3 cut(s) 7, 125, 186
MnlI CCTC 4 cut(s) 66, 91, 241, 243
MseI TTAA 1 cut(s) 143
MspR9I CCNGG 1 cut(s) 69
Mva1269I GAATGC 1 cut(s) 64
MvaI CCWGG 1 cut(s) 69
NdeII GATC 1 cut(s) 261
NlaIII CATG 1 cut(s) 89
NmuCI GTSAC 1 cut(s) 41
NspI RCATGY 1 cut(s) 89
PasI CCCWGGG 1 cut(s) 68
PctI GAATGC 1 cut(s) 64
PfeI GAWTC 1 cut(s) 227
Psp1406I AACGTT 1 cut(s) 140
Psp6I CCWGG 1 cut(s) 67
PspEI GGTNACC 1 cut(s) 41
PspGI CCWGG 1 cut(s) 67
SaqAI TTAA 1 cut(s) 143
Sau3AI GATC 1 cut(s) 261
ScrFI CCNGG 1 cut(s) 69
SduI GDGCHC 1 cut(s) 80
SetI ASST 5 cut(s) 143, 150, 156, 162, 217
SmlI CTYRAG 2 cut(s) 161, 257
SmoI CTYRAG 2 cut(s) 161, 257
Sse9I AATT 3 cut(s) 7, 125, 186
SsiI CCGC 1 cut(s) 39
StyD4I CCNGG 1 cut(s) 67
StyI CCWWGG 1 cut(s) 269
TaaI ACNGT 1 cut(s) 291
TaiI ACGT 1 cut(s) 143
TasI AATT 3 cut(s) 7, 125, 186
TfiI GAWTC 1 cut(s) 227
Tru1I TTAA 1 cut(s) 143
Tru9I TTAA 1 cut(s) 143
TscAI CASTG 1 cut(s) 252
TseFI GTSAC 1 cut(s) 41
Tsp45I GTSAC 1 cut(s) 41
TspDTI ATGAA 3 cut(s) 119, 194, 225
TspRI CASTG 1 cut(s) 252
XapI RAATTY 1 cut(s) 7
XceI RCATGY 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.