pycom11g02700

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
2161995 .. 2162799
805 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g02700.2

Sequence Viewer

Length: 597 bp
ATGATACAAAAATGCAACAAGAATAAGACAGAACAGGCTTATGAGGTGTATACCCCACTTAACACTAAAACTGCCTCACAAAATCTGACCGTTGACCATTATCAAAACCTCATTGACATGTACATCCGTACACAAATCAATGAAAACATTTCCGCGTCTTCTCCCAATCTTCTCCGCATCTCCAGGCTCCAACATCCATCTCTCTCTCCATCTCAATCTTCTACTCTACAATATACGAGGATGGTAATATCCAGTCTGGTTTACATTTATGTTCTTTTTAATTTTCTATGTGGAATTTGTAATATCATTTTACATGAAGAGGAAAGAACCATTCAGATGCAGCAGAGAACAAGAATTCACTTTCTGATGCACAGTTTTACTAATGCAATTAATGACTTAGGGCTGGTTTGGTATTGCTGTGCTTTGAAAAAAAGCTGCTGTGAGAATAACAAAGTGTTTGGTAAACTTTTTTGTAAAAGTGCTTTTGGAAAAAAAAAACAGTATGATAGTGACCAAAAAGGGTATAATACTAAATGTGCTATTAATTTAATTTTCTTAACAAATAAAAGTGAATTACTAAATATATTTTATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

199

Amino Acids

23.04

Weight (kDa)

9.11

Isoelectric Point (pI)

50.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029398)

Species Orthologous Gene IDs
pyrus_communis pycom11g02700 pycom11g21670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 50
AccII CGCG 1 cut(s) 155
AciI CCGC 2 cut(s) 153, 175
AcsI RAATTY 2 cut(s) 294, 354
AfaI GTAC 2 cut(s) 122, 130
AflIII ACRYGT 1 cut(s) 117
AgsI TTSAA 1 cut(s) 427
AjnI CCWGG 1 cut(s) 182
AluBI AGCT 1 cut(s) 435
AluI AGCT 1 cut(s) 435
ApeKI GCWGC 2 cut(s) 340, 435
ApoI RAATTY 2 cut(s) 294, 354
AseI ATTAAT 2 cut(s) 390, 543
BbsI GAAGAC 1 cut(s) 150
BbvI GCAGC 2 cut(s) 352, 422
BccI CCATC 3 cut(s) 205, 217, 235
BciT130I CCWGG 1 cut(s) 184
BisI GCNGC 2 cut(s) 341, 436
BlsI GCNGC 2 cut(s) 342, 437
Bme1390I CCNGG 1 cut(s) 184
BmiI GGNNCC 1 cut(s) 188
BmrFI CCNGG 1 cut(s) 184
BmsI GCATC 3 cut(s) 186, 327, 357
BpiI GAAGAC 1 cut(s) 150
BpmI CTGGAG 1 cut(s) 166
Bse1I ACTGG 1 cut(s) 252
BseBI CCWGG 1 cut(s) 184
BseGI GGATG 3 cut(s) 123, 193, 246
BseNI ACTGG 1 cut(s) 252
BseXI GCAGC 2 cut(s) 352, 422
Bsh1236I CGCG 1 cut(s) 155
Bsp1407I TGTACA 1 cut(s) 120
BspACI CCGC 2 cut(s) 153, 175
BspFNI CGCG 1 cut(s) 155
BspLI GGNNCC 1 cut(s) 188
BsrGI TGTACA 1 cut(s) 120
BsrI ACTGG 1 cut(s) 252
BssNAI GTATAC 1 cut(s) 51
Bst1107I GTATAC 1 cut(s) 51
Bst2UI CCWGG 1 cut(s) 184
Bst4CI ACNGT 3 cut(s) 91, 374, 501
Bst6I CTCTTC 1 cut(s) 312
BstAUI TGTACA 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 397
BstF5I GGATG 3 cut(s) 123, 193, 246
BstFNI CGCG 1 cut(s) 155
BstNI CCWGG 1 cut(s) 184
BstNSI RCATGY 1 cut(s) 121
BstSCI CCNGG 1 cut(s) 182
BstUI CGCG 1 cut(s) 155
BstV1I GCAGC 2 cut(s) 352, 422
BstV2I GAAGAC 1 cut(s) 150
BstZ17I GTATAC 1 cut(s) 51
BtsCI GGATG 3 cut(s) 123, 193, 246
CseI GACGC 1 cut(s) 144
Csp6I GTAC 2 cut(s) 121, 129
CviAII CATG 2 cut(s) 118, 314
CviJI RGCY 4 cut(s) 38, 187, 403, 435
CviKI_1 RGCY 4 cut(s) 38, 187, 403, 435
CviQI GTAC 2 cut(s) 121, 129
DdeI CTNAG 1 cut(s) 397
Eam1104I CTCTTC 1 cut(s) 312
EarI CTCTTC 1 cut(s) 312
EcoRI GAATTC 1 cut(s) 354
EcoRII CCWGG 1 cut(s) 182
FaeI CATG 2 cut(s) 121, 317
FatI CATG 2 cut(s) 117, 313
FblI GTMKAC 1 cut(s) 50
Fnu4HI GCNGC 2 cut(s) 341, 436
FokI GGATG 3 cut(s) 110, 180, 253
Fsp4HI GCNGC 2 cut(s) 341, 436
GluI GCNGC 2 cut(s) 341, 436
GsuI CTGGAG 1 cut(s) 166
HgaI GACGC 1 cut(s) 144
Hin1II CATG 2 cut(s) 121, 317
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
Hpy166II GTNNAC 5 cut(s) 51, 94, 131, 262, 464
Hpy188I TCNGA 3 cut(s) 87, 336, 366
Hpy8I GTNNAC 5 cut(s) 51, 94, 131, 262, 464
HpyCH4III ACNGT 3 cut(s) 91, 374, 501
HpyCH4V TGCA 4 cut(s) 15, 340, 370, 386
HpyF3I CTNAG 1 cut(s) 397
Hsp92II CATG 2 cut(s) 121, 317
LmnI GCTCC 1 cut(s) 192
LpnPI CCDG 6 cut(s) 20, 169, 196, 242, 265, 389
Lsp1109I GCAGC 2 cut(s) 352, 422
LweI GCATC 3 cut(s) 186, 327, 357
MaeIII GTNAC 1 cut(s) 509
MboII GAAGA 4 cut(s) 150, 161, 210, 329
MluCI AATT 7 cut(s) 280, 294, 354, 387, 544, 549, 572
MmeI TCCRAC 1 cut(s) 214
MnlI CCTC 5 cut(s) 37, 85, 119, 231, 313
MseI TTAA 6 cut(s) 60, 279, 390, 543, 548, 557
MslI CAYNNNNRTG 2 cut(s) 116, 335
MspR9I CCNGG 1 cut(s) 184
MvaI CCWGG 1 cut(s) 184
MvnI CGCG 1 cut(s) 155
NlaIII CATG 2 cut(s) 121, 317
NlaIV GGNNCC 1 cut(s) 188
NmuCI GTSAC 1 cut(s) 509
NspI RCATGY 1 cut(s) 121
PciI ACATGT 1 cut(s) 117
PkrI GCNGC 2 cut(s) 342, 437
PscI ACATGT 1 cut(s) 117
PshBI ATTAAT 2 cut(s) 390, 543
Psp6I CCWGG 1 cut(s) 182
PspGI CCWGG 1 cut(s) 182
PspN4I GGNNCC 1 cut(s) 188
RsaI GTAC 2 cut(s) 122, 130
RsaNI GTAC 2 cut(s) 121, 129
RseI CAYNNNNRTG 2 cut(s) 116, 335
SaqAI TTAA 6 cut(s) 60, 279, 390, 543, 548, 557
SatI GCNGC 2 cut(s) 341, 436
ScrFI CCNGG 1 cut(s) 184
SetI ASST 3 cut(s) 48, 111, 437
SfaNI GCATC 3 cut(s) 186, 327, 357
SmiMI CAYNNNNRTG 2 cut(s) 116, 335
Sse9I AATT 7 cut(s) 280, 294, 354, 387, 544, 549, 572
SsiI CCGC 2 cut(s) 153, 175
StyD4I CCNGG 1 cut(s) 182
TaaI ACNGT 3 cut(s) 91, 374, 501
TasI AATT 7 cut(s) 280, 294, 354, 387, 544, 549, 572
TatI WGTACW 1 cut(s) 120
Tru1I TTAA 6 cut(s) 60, 279, 390, 543, 548, 557
Tru9I TTAA 6 cut(s) 60, 279, 390, 543, 548, 557
TseFI GTSAC 1 cut(s) 509
TseI GCWGC 2 cut(s) 340, 435
Tsp45I GTSAC 1 cut(s) 509
TspDTI ATGAA 2 cut(s) 156, 330
TspGWI ACGGA 1 cut(s) 116
VspI ATTAAT 2 cut(s) 390, 543
XapI RAATTY 2 cut(s) 294, 354
XceI RCATGY 1 cut(s) 121
XmiI GTMKAC 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.