pycom11g05850

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
4483244 .. 4484876
1633 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1035 bp
ATGTCGAGCGCCGATTCCAAACTCAGAGACCTCCAGGAGTCCCCACTCTCCCGCGACCACGATCAGATCCGATCTCAGATGGGTGGTCGAGGTGCCAGCAGTCTCAAGGGGATCCCCATCATCATCCCCGATCTAAAACCTCAAGGTGCGTTCTCGGCAGCCAGTGAACCCAGGAGGGCCTTTTTGACCATGTTGGCTGGAAACTATGACGAGGCCGTGTTCGGTGTAGTTGGGTTGGCCAAGGGCTTGAAGAAAGTGATGAGCAAGTACCCCCTGGTTGTGGCTTTCTTGGCGGATATGTCTAAAGAGCACTGCAAGCTTCTGGCCTCCAACGGCTGCATCGTGAAAGGGATTGAGCCCGTGTTCAGGGCCTCATATGGCACAAATTACTCCAAGCTTCGCATTTGGGAGTTTGAGGAGTATGACAAAATGATCTACTTGGACGGAAACGTCCAAGTCTTTAAGAACATTGATCACATGTTTGACTACCCTGACTCCTATTTCTATGCGGCGCTGGACTGCTTCTGCGACAAGTCTTGGAGCCGCAGCCCACAGCACAAGATTGGGTACTGCCAGCAGTGGCCCAACAAGGCTCAGTGGGACCCCACATCGGGCCCTAAGCCTCCTCTTTACTTCAATGCTGACATGTTTGTCTTTGAGCCCAGCTTGGCGACTTACGGTGACCTCGTCAAAACCCTCCAGACTTCTTCTACCACCGCCTTTGCAGAGCAGGATCTTCTGAACGAGTTTTTCAAGGACAAGTTGGTGGCCCTGGCTCCTCATTACAACCTTATGGTGCCCATGCTCTGGCGTCACCCAGAGGCCGTTGAGCTTGACAGGGATGATGACTCTTTGGACTACAAGAAGACTCTGACTTCAGCTAAAGCTGGAAGAGGCACATGCCAAGTTAACCTACTGCCTGTGACATCAGCTGAGGCTGGAAAGGGCACATACCAAGTTAATCTGCAGCCGTCAGAAGCTGGATTTCCTGAGACTGGCGCTGACGAATTCACCTTCGCCCCATTCGCTGCTTGA

Protein Analysis

345

Amino Acids

38.35

Weight (kDa)

5.6

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 69 - 272 1.7e-19 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024489)

Species Orthologous Gene IDs
malus_domestica MD11G1070000.v1.1
pyrus_communis pycom11g05820 pycom11g05850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 449, 650
AccB1I GGYRCC 2 cut(s) 92, 796
AccB7I CCANNNNNTGG 1 cut(s) 807
AccII CGCG 1 cut(s) 54
AciI CCGC 5 cut(s) 52, 293, 509, 544, 717
AclWI GGATC 4 cut(s) 61, 106, 119, 741
AcoI YGGCCR 1 cut(s) 237
AcsI RAATTY 1 cut(s) 1007
AcuI CTGAAG 1 cut(s) 861
AcyI GRCGYC 1 cut(s) 811
AfaI GTAC 2 cut(s) 269, 569
AfiI CCNNNNNNNGG 6 cut(s) 280, 366, 610, 611, 807, 995
AflIII ACRYGT 2 cut(s) 477, 645
AgsI TTSAA 3 cut(s) 250, 637, 754
AjnI CCWGG 4 cut(s) 33, 170, 273, 771
AluBI AGCT 8 cut(s) 319, 397, 666, 832, 881, 887, 932, 980
AluI AGCT 8 cut(s) 319, 397, 666, 832, 881, 887, 932, 980
Alw21I GWGCWC 1 cut(s) 312
Alw26I GTCTC 3 cut(s) 21, 107, 986
AlwI GGATC 4 cut(s) 61, 106, 119, 741
AlwNI CAGNNNCTG 1 cut(s) 980
AoxI GGCC 9 cut(s) 177, 213, 237, 324, 369, 581, 613, 768, 822
ApaI GGGCCC 1 cut(s) 617
ApeKI GCWGC 5 cut(s) 158, 336, 546, 967, 1028
ApoI RAATTY 1 cut(s) 1007
AspLEI GCGC 3 cut(s) 11, 514, 1001
AspS9I GGNCC 7 cut(s) 177, 369, 582, 601, 613, 614, 769
AsuHPI GGTGA 3 cut(s) 692, 806, 1003
AvaII GGWCC 1 cut(s) 601
BaeGI GKGCMC 3 cut(s) 617, 801, 950
BalI TGGCCA 1 cut(s) 239
BamHI GGATCC 1 cut(s) 111
BanI GGYRCC 2 cut(s) 92, 796
BanII GRGCYC 3 cut(s) 360, 617, 663
BbsI GAAGAC 1 cut(s) 872
Bbv12I GWGCWC 1 cut(s) 312
BbvCI CCTCAGC 1 cut(s) 933
BbvI GCAGC 5 cut(s) 170, 323, 558, 979, 1015
BccI CCATC 2 cut(s) 73, 125
BceAI ACGGC 4 cut(s) 200, 349, 809, 955
BciT130I CCWGG 4 cut(s) 35, 172, 275, 773
BclI TGATCA 1 cut(s) 472
BcoDI GTCTC 3 cut(s) 21, 107, 986
BfmI CTRYAG 1 cut(s) 965
BfoI RGCGCY 3 cut(s) 12, 515, 1002
BisI GCNGC 7 cut(s) 159, 337, 510, 544, 547, 968, 1029
BlsI GCNGC 7 cut(s) 160, 338, 511, 545, 548, 969, 1030
Bme1390I CCNGG 4 cut(s) 35, 172, 275, 773
Bme18I GGWCC 1 cut(s) 601
BmgT120I GGNCC 7 cut(s) 177, 369, 582, 601, 613, 614, 769
BmiI GGNNCC 8 cut(s) 94, 113, 542, 602, 603, 615, 777, 798
BmrFI CCNGG 4 cut(s) 35, 172, 275, 773
BmsI GCATC 1 cut(s) 348
BpiI GAAGAC 1 cut(s) 872
BpmI CTGGAG 2 cut(s) 17, 683
Bpu10I CCTNAGC 2 cut(s) 618, 933
BpuEI CTTGAG 2 cut(s) 89, 126
BsaBI GATNNNNATC 1 cut(s) 116
BsaHI GRCGYC 1 cut(s) 811
BsaI GGTCTC 1 cut(s) 21
BsaJI CCNNGG 4 cut(s) 170, 240, 273, 771
BsaXI ACNNNNNCTCC 2 cut(s) 479, 509
Bsc4I CCNNNNNNNGG 6 cut(s) 280, 366, 610, 611, 807, 995
Bse1I ACTGG 2 cut(s) 162, 1000
Bse8I GATNNNNATC 1 cut(s) 116
BseBI CCWGG 4 cut(s) 35, 172, 275, 773
BseDI CCNNGG 4 cut(s) 170, 240, 273, 771
BseGI GGATG 2 cut(s) 123, 847
BseJI GATNNNNATC 1 cut(s) 116
BseLI CCNNNNNNNGG 6 cut(s) 280, 366, 610, 611, 807, 995
BseMII CTCAG 5 cut(s) 37, 89, 608, 924, 981
BseNI ACTGG 2 cut(s) 162, 1000
BseRI GAGGAG 3 cut(s) 431, 615, 768
BseSI GKGCMC 3 cut(s) 617, 801, 950
BseXI GCAGC 5 cut(s) 170, 323, 558, 979, 1015
BseYI CCCAGC 1 cut(s) 662
Bsh1236I CGCG 1 cut(s) 54
BshFI GGCC 9 cut(s) 179, 215, 239, 326, 371, 583, 615, 770, 824
BshNI GGYRCC 2 cut(s) 92, 796
BsiHKAI GWGCWC 1 cut(s) 312
BslFI GGGAC 2 cut(s) 25, 614
BslI CCNNNNNNNGG 6 cut(s) 280, 366, 610, 611, 807, 995
BsmAI GTCTC 3 cut(s) 21, 107, 986
BsmFI GGGAC 2 cut(s) 25, 614
BsnI GGCC 9 cut(s) 179, 215, 239, 326, 371, 583, 615, 770, 824
Bso31I GGTCTC 1 cut(s) 21
Bsp120I GGGCCC 1 cut(s) 613
Bsp1286I GDGCHC 6 cut(s) 312, 360, 617, 663, 801, 950
Bsp143I GATC 8 cut(s) 61, 66, 71, 111, 130, 432, 472, 733
BspACI CCGC 5 cut(s) 52, 293, 509, 544, 717
BspANI GGCC 9 cut(s) 179, 215, 239, 326, 371, 583, 615, 770, 824
BspCNI CTCAG 5 cut(s) 36, 88, 607, 925, 982
BspFNI CGCG 1 cut(s) 54
BspLI GGNNCC 8 cut(s) 94, 113, 542, 602, 603, 615, 777, 798
BspMAI CTGCAG 1 cut(s) 969
BspPI GGATC 4 cut(s) 61, 106, 119, 741
BspT107I GGYRCC 2 cut(s) 92, 796
BspTNI GGTCTC 1 cut(s) 21
BsrI ACTGG 2 cut(s) 162, 1000
BssECI CCNNGG 4 cut(s) 170, 240, 273, 771
BssMI GATC 8 cut(s) 61, 66, 71, 111, 130, 432, 472, 733
BssNI GRCGYC 1 cut(s) 811
BssT1I CCWWGG 1 cut(s) 240
Bst2UI CCWGG 4 cut(s) 35, 172, 275, 773
Bst4CI ACNGT 1 cut(s) 680
Bst6I CTCTTC 1 cut(s) 886
BstACI GRCGYC 1 cut(s) 811
BstC8I GCNNGC 3 cut(s) 97, 317, 575
BstDEI CTNAG 6 cut(s) 23, 75, 594, 618, 933, 990
BstEII GGTNACC 1 cut(s) 680
BstF5I GGATG 2 cut(s) 123, 847
BstFNI CGCG 1 cut(s) 54
BstH2I RGCGCY 3 cut(s) 12, 515, 1002
BstHHI GCGC 3 cut(s) 11, 514, 1001
BstKTI GATC 8 cut(s) 64, 69, 74, 114, 133, 435, 475, 736
BstMAI GTCTC 3 cut(s) 21, 107, 986
BstMBI GATC 8 cut(s) 61, 66, 71, 111, 130, 432, 472, 733
BstMWI GCNNNNNNNGC 4 cut(s) 155, 290, 316, 1025
BstNI CCWGG 4 cut(s) 35, 172, 275, 773
BstNSI RCATGY 3 cut(s) 481, 649, 903
BstPI GGTNACC 1 cut(s) 680
BstSCI CCNGG 4 cut(s) 33, 170, 273, 771
BstSFI CTRYAG 1 cut(s) 965
BstSLI GKGCMC 3 cut(s) 617, 801, 950
BstUI CGCG 1 cut(s) 54
BstV1I GCAGC 5 cut(s) 170, 323, 558, 979, 1015
BstV2I GAAGAC 1 cut(s) 872
BstX2I RGATCY 3 cut(s) 66, 111, 733
BstYI RGATCY 3 cut(s) 66, 111, 733
BsuRI GGCC 9 cut(s) 179, 215, 239, 326, 371, 583, 615, 770, 824
BtsCI GGATG 2 cut(s) 123, 847
BtsI GCAGTG 2 cut(s) 310, 584
BtsIMutI CAGTG 4 cut(s) 169, 310, 584, 602
Cac8I GCNNGC 3 cut(s) 97, 317, 575
CaiI CAGNNNCTG 1 cut(s) 980
CfoI GCGC 3 cut(s) 11, 514, 1001
Cfr13I GGNCC 7 cut(s) 177, 369, 582, 601, 613, 614, 769
CseI GACGC 1 cut(s) 800
Csp6I GTAC 2 cut(s) 268, 568
CspCI CAANNNNNGTGG 2 cut(s) 703, 738
CviAII CATG 5 cut(s) 190, 478, 646, 802, 900
CviQI GTAC 2 cut(s) 268, 568
DdeI CTNAG 6 cut(s) 23, 75, 594, 618, 933, 990
DpnI GATC 8 cut(s) 63, 68, 73, 113, 132, 434, 474, 735
DpnII GATC 8 cut(s) 61, 66, 71, 111, 130, 432, 472, 733
DrdI GACNNNNNNGTC 2 cut(s) 449, 650
DseDI GACNNNNNNGTC 2 cut(s) 449, 650
EaeI YGGCCR 1 cut(s) 237
Eam1104I CTCTTC 1 cut(s) 886
EarI CTCTTC 1 cut(s) 886
EciI GGCGGA 1 cut(s) 308
Eco130I CCWWGG 1 cut(s) 240
Eco24I GRGCYC 3 cut(s) 360, 617, 663
Eco31I GGTCTC 1 cut(s) 21
Eco47I GGWCC 1 cut(s) 601
Eco57I CTGAAG 1 cut(s) 861
Eco91I GGTNACC 1 cut(s) 680
EcoO109I RGGNCCY 4 cut(s) 177, 369, 601, 614
EcoO65I GGTNACC 1 cut(s) 680
EcoRI GAATTC 1 cut(s) 1007
EcoRII CCWGG 4 cut(s) 33, 170, 273, 771
EcoT14I CCWWGG 1 cut(s) 240
EcoT38I GRGCYC 3 cut(s) 360, 617, 663
ErhI CCWWGG 1 cut(s) 240
FaeI CATG 5 cut(s) 193, 481, 649, 805, 903
FaqI GGGAC 2 cut(s) 25, 614
FatI CATG 5 cut(s) 189, 477, 645, 801, 899
FauI CCCGC 1 cut(s) 59
FauNDI CATATG 1 cut(s) 376
FbaI TGATCA 1 cut(s) 472
Fnu4HI GCNGC 7 cut(s) 159, 337, 510, 544, 547, 968, 1029
FokI GGATG 2 cut(s) 110, 854
FriOI GRGCYC 3 cut(s) 360, 617, 663
Fsp4HI GCNGC 7 cut(s) 159, 337, 510, 544, 547, 968, 1029
GlaI GCGC 3 cut(s) 10, 513, 1000
GluI GCNGC 7 cut(s) 159, 337, 510, 544, 547, 968, 1029
GsaI CCCAGC 1 cut(s) 666
GsuI CTGGAG 2 cut(s) 17, 683
HaeII RGCGCY 3 cut(s) 12, 515, 1002
HaeIII GGCC 9 cut(s) 179, 215, 239, 326, 371, 583, 615, 770, 824
HgaI GACGC 1 cut(s) 800
HhaI GCGC 3 cut(s) 11, 514, 1001
Hin1I GRCGYC 1 cut(s) 811
Hin1II CATG 5 cut(s) 193, 481, 649, 805, 903
Hin6I GCGC 3 cut(s) 9, 512, 999
HinP1I GCGC 3 cut(s) 9, 512, 999
HincII GTYRAC 1 cut(s) 910
HindII GTYRAC 1 cut(s) 910
HindIII AAGCTT 2 cut(s) 317, 395
HinfI GANTC 5 cut(s) 14, 38, 494, 848, 868
HpaI GTTAAC 1 cut(s) 910
HphI GGTGA 3 cut(s) 692, 806, 1003
Hpy166II GTNNAC 2 cut(s) 167, 910
Hpy188I TCNGA 7 cut(s) 26, 66, 71, 78, 741, 873, 976
Hpy188III TCNNGA 3 cut(s) 343, 700, 989
Hpy8I GTNNAC 2 cut(s) 167, 910
HpyAV CCTTC 1 cut(s) 1024
HpyCH4III ACNGT 1 cut(s) 680
HpyCH4IV ACGT 1 cut(s) 450
HpyCH4V TGCA 4 cut(s) 315, 339, 725, 967
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 290, 316, 1025
HpyF3I CTNAG 6 cut(s) 23, 75, 594, 618, 933, 990
HpySE526I ACGT 1 cut(s) 450
Hsp92I GRCGYC 1 cut(s) 811
Hsp92II CATG 5 cut(s) 193, 481, 649, 805, 903
HspAI GCGC 3 cut(s) 9, 512, 999
KflI GGGWCCC 1 cut(s) 601
Ksp22I TGATCA 1 cut(s) 472
KspAI GTTAAC 1 cut(s) 910
Kzo9I GATC 8 cut(s) 61, 66, 71, 111, 130, 432, 472, 733
LmnI GCTCC 2 cut(s) 540, 781
Lsp1109I GCAGC 5 cut(s) 170, 323, 558, 979, 1015
LweI GCATC 1 cut(s) 348
MaeII ACGT 1 cut(s) 450
MaeIII GTNAC 3 cut(s) 680, 812, 922
MalI GATC 8 cut(s) 63, 68, 73, 113, 132, 434, 474, 735
MboI GATC 8 cut(s) 61, 66, 71, 111, 130, 432, 472, 733
MboII GAAGA 5 cut(s) 262, 699, 728, 877, 903
MflI RGATCY 3 cut(s) 66, 111, 733
MhlI GDGCHC 6 cut(s) 312, 360, 617, 663, 801, 950
MlsI TGGCCA 1 cut(s) 239
MluCI AATT 2 cut(s) 385, 1007
MluNI TGGCCA 1 cut(s) 239
MlyI GAGTC 4 cut(s) 47, 488, 842, 862
MmeI TCCRAC 1 cut(s) 354
Mox20I TGGCCA 1 cut(s) 239
MscI TGGCCA 1 cut(s) 239
MseI TTAA 3 cut(s) 462, 909, 960
Msp20I TGGCCA 1 cut(s) 239
MspA1I CMGCKG 1 cut(s) 932
MspR9I CCNGG 4 cut(s) 35, 172, 275, 773
MvaI CCWGG 4 cut(s) 35, 172, 275, 773
MvnI CGCG 1 cut(s) 54
MwoI GCNNNNNNNGC 4 cut(s) 155, 290, 316, 1025
NdeI CATATG 1 cut(s) 376
NdeII GATC 8 cut(s) 61, 66, 71, 111, 130, 432, 472, 733
NlaIII CATG 5 cut(s) 193, 481, 649, 805, 903
NlaIV GGNNCC 8 cut(s) 94, 113, 542, 602, 603, 615, 777, 798
NmeAIII GCCGAG 1 cut(s) 134
NmuCI GTSAC 3 cut(s) 680, 812, 922
NspI RCATGY 3 cut(s) 481, 649, 903
PciI ACATGT 2 cut(s) 477, 645
PcsI WCGNNNNNNNCGW 2 cut(s) 339, 684
PfeI GAWTC 1 cut(s) 14
PflFI GACNNNGTC 1 cut(s) 686
PflMI CCANNNNNTGG 1 cut(s) 807
PfoI TCCNGGA 1 cut(s) 33
PkrI GCNGC 7 cut(s) 160, 338, 511, 545, 548, 969, 1030
PleI GAGTC 4 cut(s) 46, 488, 842, 862
PpsI GAGTC 4 cut(s) 46, 488, 842, 862
PpuMI RGGWCCY 1 cut(s) 601
PscI ACATGT 2 cut(s) 477, 645
Psp5II RGGWCCY 1 cut(s) 601
Psp6I CCWGG 4 cut(s) 33, 170, 273, 771
PspEI GGTNACC 1 cut(s) 680
PspFI CCCAGC 1 cut(s) 662
PspGI CCWGG 4 cut(s) 33, 170, 273, 771
PspN4I GGNNCC 8 cut(s) 94, 113, 542, 602, 603, 615, 777, 798
PspOMI GGGCCC 1 cut(s) 613
PspPI GGNCC 7 cut(s) 177, 369, 582, 601, 613, 614, 769
PspPPI RGGWCCY 1 cut(s) 601
PstI CTGCAG 1 cut(s) 969
PstNI CAGNNNCTG 1 cut(s) 980
PsuI RGATCY 3 cut(s) 66, 111, 733
PsyI GACNNNGTC 1 cut(s) 686
PvuII CAGCTG 1 cut(s) 932
RsaI GTAC 2 cut(s) 269, 569
RsaNI GTAC 2 cut(s) 268, 568
SaqAI TTAA 3 cut(s) 462, 909, 960
SatI GCNGC 7 cut(s) 159, 337, 510, 544, 547, 968, 1029
Sau3AI GATC 8 cut(s) 61, 66, 71, 111, 130, 432, 472, 733
Sau96I GGNCC 7 cut(s) 177, 369, 582, 601, 613, 614, 769
SchI GAGTC 4 cut(s) 47, 488, 842, 862
ScrFI CCNGG 4 cut(s) 35, 172, 275, 773
SduI GDGCHC 6 cut(s) 312, 360, 617, 663, 801, 950
SfaNI GCATC 1 cut(s) 348
SfcI CTRYAG 1 cut(s) 965
SinI GGWCC 1 cut(s) 601
SmlI CTYRAG 2 cut(s) 104, 141
SmoI CTYRAG 2 cut(s) 104, 141
Sse9I AATT 2 cut(s) 385, 1007
SsiI CCGC 5 cut(s) 52, 293, 509, 544, 717
StyD4I CCNGG 4 cut(s) 33, 170, 273, 771
StyI CCWWGG 1 cut(s) 240
TaaI ACNGT 1 cut(s) 680
TaiI ACGT 1 cut(s) 453
TaqI TCGA 2 cut(s) 5, 88
TasI AATT 2 cut(s) 385, 1007
TauI GCSGC 2 cut(s) 512, 546
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 3 cut(s) 462, 909, 960
Tru9I TTAA 3 cut(s) 462, 909, 960
TscAI CASTG 4 cut(s) 169, 317, 584, 602
TseFI GTSAC 3 cut(s) 680, 812, 922
TseI GCWGC 5 cut(s) 158, 336, 546, 967, 1028
Tsp45I GTSAC 3 cut(s) 680, 812, 922
TspGWI ACGGA 1 cut(s) 459
TspRI CASTG 4 cut(s) 169, 317, 584, 602
Tth111I GACNNNGTC 1 cut(s) 686
Van91I CCANNNNNTGG 1 cut(s) 807
VpaK11BI GGWCC 1 cut(s) 601
XapI RAATTY 1 cut(s) 1007
XceI RCATGY 3 cut(s) 481, 649, 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.