pycom11g18410

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
20561166 .. 20561832
667 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g18410.3

Sequence Viewer

Length: 201 bp
ATGGAGGGGTATAAATGGATGTTTAATAACCAGATAGTAACTGTCTGGTCAGCACCAAATTACTGTTACAGATGTGGTAATGTAGCTGCAATTCTTGAGCTGGATGAAAATCTTAACAAGCAGTTTCGTGTTTTTGATGCTGCCCCACAGGAATCAAGAGGGGCGCCTGCCAAGAAACCTGCACCAGACTACTTTCTCTGA

Protein Analysis

67

Amino Acids

7.59

Weight (kDa)

6.1

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029406)

Species Orthologous Gene IDs
pyrus_communis pycom11g18410 pycom13g07240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 187
AccB1I GGYRCC 1 cut(s) 163
AcyI GRCGYC 1 cut(s) 164
AluBI AGCT 2 cut(s) 86, 100
AluI AGCT 2 cut(s) 86, 100
ApeKI GCWGC 2 cut(s) 86, 140
AspLEI GCGC 1 cut(s) 166
BanI GGYRCC 1 cut(s) 163
BbvI GCAGC 2 cut(s) 73, 127
BfoI RGCGCY 1 cut(s) 167
BfuAI ACCTGC 1 cut(s) 187
BisI GCNGC 2 cut(s) 87, 141
BlsI GCNGC 2 cut(s) 88, 142
BmiI GGNNCC 1 cut(s) 165
BmsI GCATC 1 cut(s) 127
BpuEI CTTGAG 1 cut(s) 116
BsaBI GATNNNNATC 1 cut(s) 108
BsaHI GRCGYC 1 cut(s) 164
Bse8I GATNNNNATC 1 cut(s) 108
BseGI GGATG 2 cut(s) 24, 109
BseJI GATNNNNATC 1 cut(s) 108
BseXI GCAGC 2 cut(s) 73, 127
BsgI GTGCAG 1 cut(s) 165
BshNI GGYRCC 1 cut(s) 163
BspLI GGNNCC 1 cut(s) 165
BspMI ACCTGC 1 cut(s) 187
BspT107I GGYRCC 1 cut(s) 163
BssNI GRCGYC 1 cut(s) 164
Bst4CI ACNGT 2 cut(s) 43, 65
BstACI GRCGYC 1 cut(s) 164
BstC8I GCNNGC 1 cut(s) 168
BstF5I GGATG 2 cut(s) 24, 109
BstH2I RGCGCY 1 cut(s) 167
BstHHI GCGC 1 cut(s) 166
BstV1I GCAGC 2 cut(s) 73, 127
BtsCI GGATG 2 cut(s) 24, 109
BveI ACCTGC 1 cut(s) 187
Cac8I GCNNGC 1 cut(s) 168
CfoI GCGC 1 cut(s) 166
CviJI RGCY 2 cut(s) 86, 100
CviKI_1 RGCY 2 cut(s) 86, 100
DinI GGCGCC 1 cut(s) 165
EgeI GGCGCC 1 cut(s) 165
EheI GGCGCC 1 cut(s) 165
FaiI YATR 1 cut(s) 12
Fnu4HI GCNGC 2 cut(s) 87, 141
FokI GGATG 2 cut(s) 31, 116
Fsp4HI GCNGC 2 cut(s) 87, 141
GlaI GCGC 1 cut(s) 165
GluI GCNGC 2 cut(s) 87, 141
HaeII RGCGCY 1 cut(s) 167
HhaI GCGC 1 cut(s) 166
Hin1I GRCGYC 1 cut(s) 164
Hin6I GCGC 1 cut(s) 164
HinP1I GCGC 1 cut(s) 164
HinfI GANTC 1 cut(s) 152
Hpy188I TCNGA 1 cut(s) 200
Hpy188III TCNNGA 2 cut(s) 95, 156
HpyCH4III ACNGT 2 cut(s) 43, 65
HpyCH4V TGCA 2 cut(s) 89, 182
Hsp92I GRCGYC 1 cut(s) 164
HspAI GCGC 1 cut(s) 164
KasI GGCGCC 1 cut(s) 163
LpnPI CCDG 6 cut(s) 31, 44, 86, 134, 180, 192
Lsp1109I GCAGC 2 cut(s) 73, 127
LweI GCATC 1 cut(s) 127
MaeIII GTNAC 2 cut(s) 37, 65
MluCI AATT 2 cut(s) 58, 90
Mly113I GGCGCC 1 cut(s) 164
MnlI CCTC 1 cut(s) 152
MseI TTAA 2 cut(s) 24, 114
NarI GGCGCC 1 cut(s) 164
NlaIV GGNNCC 1 cut(s) 165
PfeI GAWTC 1 cut(s) 152
PkrI GCNGC 2 cut(s) 88, 142
PluTI GGCGCC 1 cut(s) 167
PspN4I GGNNCC 1 cut(s) 165
SaqAI TTAA 2 cut(s) 24, 114
SatI GCNGC 2 cut(s) 87, 141
SetI ASST 3 cut(s) 88, 102, 181
SfaNI GCATC 1 cut(s) 127
SfoI GGCGCC 1 cut(s) 165
SmlI CTYRAG 1 cut(s) 95
SmoI CTYRAG 1 cut(s) 95
Sse9I AATT 2 cut(s) 58, 90
SspDI GGCGCC 1 cut(s) 163
TaaI ACNGT 2 cut(s) 43, 65
TasI AATT 2 cut(s) 58, 90
TfiI GAWTC 1 cut(s) 152
Tru1I TTAA 2 cut(s) 24, 114
Tru9I TTAA 2 cut(s) 24, 114
TseI GCWGC 2 cut(s) 86, 140
TspDTI ATGAA 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.