No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom12554g00050 pycom12555g00190 pycom2246g00080 pycom2246g00160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 8 cut(s) | 295, 337, 379, 421, 499, 552, 606, 659 |
| AcoI | YGGCCR | 2 cut(s) | 18, 458 |
| AluBI | AGCT | 1 cut(s) | 119 |
| AluI | AGCT | 1 cut(s) | 119 |
| AoxI | GGCC | 2 cut(s) | 18, 458 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 103, 135 |
| BalI | TGGCCA | 1 cut(s) | 20 |
| BccI | CCATC | 1 cut(s) | 262 |
| BfaI | CTAG | 3 cut(s) | 284, 309, 351 |
| BpuEI | CTTGAG | 1 cut(s) | 67 |
| Bsa29I | ATCGAT | 1 cut(s) | 222 |
| Bse3DI | GCAATG | 1 cut(s) | 21 |
| BseCI | ATCGAT | 1 cut(s) | 222 |
| BseGI | GGATG | 2 cut(s) | 130, 441 |
| BseMI | GCAATG | 1 cut(s) | 21 |
| Bsh1285I | CGRYCG | 7 cut(s) | 299, 341, 383, 425, 503, 556, 610 |
| BshFI | GGCC | 2 cut(s) | 20, 460 |
| BshVI | ATCGAT | 1 cut(s) | 222 |
| BsiEI | CGRYCG | 7 cut(s) | 299, 341, 383, 425, 503, 556, 610 |
| BslFI | GGGAC | 1 cut(s) | 595 |
| BsmFI | GGGAC | 1 cut(s) | 595 |
| BsnI | GGCC | 2 cut(s) | 20, 460 |
| Bsp143I | GATC | 1 cut(s) | 223 |
| Bsp19I | CCATGG | 2 cut(s) | 461, 663 |
| BspANI | GGCC | 2 cut(s) | 20, 460 |
| BspDI | ATCGAT | 1 cut(s) | 222 |
| BsrDI | GCAATG | 1 cut(s) | 21 |
| BssMI | GATC | 1 cut(s) | 223 |
| BssT1I | CCWWGG | 3 cut(s) | 461, 577, 663 |
| Bst4CI | ACNGT | 7 cut(s) | 300, 342, 384, 426, 504, 557, 611 |
| BstDSI | CCRYGG | 9 cut(s) | 299, 341, 383, 425, 461, 503, 556, 610, 663 |
| BstF5I | GGATG | 2 cut(s) | 130, 441 |
| BstKTI | GATC | 1 cut(s) | 226 |
| BstMBI | GATC | 1 cut(s) | 223 |
| BstMCI | CGRYCG | 7 cut(s) | 299, 341, 383, 425, 503, 556, 610 |
| Bsu15I | ATCGAT | 1 cut(s) | 222 |
| BsuRI | GGCC | 2 cut(s) | 20, 460 |
| BsuTUI | ATCGAT | 1 cut(s) | 222 |
| BtgI | CCRYGG | 9 cut(s) | 299, 341, 383, 425, 461, 503, 556, 610, 663 |
| BtsCI | GGATG | 2 cut(s) | 130, 441 |
| ClaI | ATCGAT | 1 cut(s) | 222 |
| DpnI | GATC | 1 cut(s) | 225 |
| DpnII | GATC | 1 cut(s) | 223 |
| EaeI | YGGCCR | 2 cut(s) | 18, 458 |
| Eco130I | CCWWGG | 3 cut(s) | 461, 577, 663 |
| EcoT14I | CCWWGG | 3 cut(s) | 461, 577, 663 |
| ErhI | CCWWGG | 3 cut(s) | 461, 577, 663 |
| FaqI | GGGAC | 1 cut(s) | 595 |
| FblI | GTMKAC | 8 cut(s) | 295, 337, 379, 421, 499, 552, 606, 659 |
| FokI | GGATG | 2 cut(s) | 137, 428 |
| FspBI | CTAG | 3 cut(s) | 284, 309, 351 |
| HaeIII | GGCC | 2 cut(s) | 20, 460 |
| HincII | GTYRAC | 8 cut(s) | 296, 338, 380, 422, 500, 553, 607, 660 |
| HindII | GTYRAC | 8 cut(s) | 296, 338, 380, 422, 500, 553, 607, 660 |
| HinfI | GANTC | 1 cut(s) | 209 |
| Hpy166II | GTNNAC | 8 cut(s) | 296, 338, 380, 422, 500, 553, 607, 660 |
| Hpy188I | TCNGA | 1 cut(s) | 111 |
| Hpy188III | TCNNGA | 2 cut(s) | 147, 170 |
| Hpy8I | GTNNAC | 8 cut(s) | 296, 338, 380, 422, 500, 553, 607, 660 |
| Hpy99I | CGWCG | 2 cut(s) | 39, 42 |
| HpyCH4III | ACNGT | 7 cut(s) | 300, 342, 384, 426, 504, 557, 611 |
| HpyCH4IV | ACGT | 1 cut(s) | 189 |
| HpyCH4V | TGCA | 1 cut(s) | 14 |
| HpySE526I | ACGT | 1 cut(s) | 189 |
| Kzo9I | GATC | 1 cut(s) | 223 |
| MaeI | CTAG | 3 cut(s) | 284, 309, 351 |
| MaeII | ACGT | 1 cut(s) | 189 |
| MaeIII | GTNAC | 2 cut(s) | 311, 353 |
| MalI | GATC | 1 cut(s) | 225 |
| MboI | GATC | 1 cut(s) | 223 |
| MlsI | TGGCCA | 1 cut(s) | 20 |
| MluNI | TGGCCA | 1 cut(s) | 20 |
| MlyI | GAGTC | 1 cut(s) | 203 |
| MmeI | TCCRAC | 2 cut(s) | 89, 160 |
| MnlI | CCTC | 9 cut(s) | 251, 335, 377, 419, 455, 497, 550, 604, 657 |
| Mox20I | TGGCCA | 1 cut(s) | 20 |
| MscI | TGGCCA | 1 cut(s) | 20 |
| Msp20I | TGGCCA | 1 cut(s) | 20 |
| NcoI | CCATGG | 2 cut(s) | 461, 663 |
| NdeII | GATC | 1 cut(s) | 223 |
| NmuCI | GTSAC | 2 cut(s) | 311, 353 |
| PflFI | GACNNNGTC | 1 cut(s) | 160 |
| PleI | GAGTC | 1 cut(s) | 203 |
| PpsI | GAGTC | 1 cut(s) | 203 |
| PsyI | GACNNNGTC | 1 cut(s) | 160 |
| SalI | GTCGAC | 8 cut(s) | 294, 336, 378, 420, 498, 551, 605, 658 |
| Sau3AI | GATC | 1 cut(s) | 223 |
| SchI | GAGTC | 1 cut(s) | 203 |
| SetI | ASST | 3 cut(s) | 121, 192, 243 |
| SmlI | CTYRAG | 1 cut(s) | 46 |
| SmoI | CTYRAG | 1 cut(s) | 46 |
| SspMI | CTAG | 3 cut(s) | 284, 309, 351 |
| StyI | CCWWGG | 3 cut(s) | 461, 577, 663 |
| TaaI | ACNGT | 7 cut(s) | 300, 342, 384, 426, 504, 557, 611 |
| TaiI | ACGT | 1 cut(s) | 192 |
| TaqI | TCGA | 9 cut(s) | 222, 295, 337, 379, 421, 499, 552, 606, 659 |
| TaqII | GACCGA | 1 cut(s) | 53 |
| TseFI | GTSAC | 2 cut(s) | 311, 353 |
| Tsp45I | GTSAC | 2 cut(s) | 311, 353 |
| Tth111I | GACNNNGTC | 1 cut(s) | 160 |
| XmiI | GTMKAC | 8 cut(s) | 295, 337, 379, 421, 499, 552, 606, 659 |
| XspI | CTAG | 3 cut(s) | 284, 309, 351 |