pycom12g06790

DYW family of nucleic acid deaminases

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
7076434 .. 7076913
480 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 480 bp
ATGGATATGACTGGTATTAAGCCTGATGCTGTTAGTGTTGTGAGTGCCTTTTTGGCTTGTTGGCAACTAGGGTGTTTGGAGAACGGGGAAGAAATCTATGAGATCATGAGAAAATATGGGATTGTATGCAATATAATGGTTGCTAATGCGTGTCTTGATATGCATGTGAAATGTGGTTGCATTGACATGGCTGAGACTTTGTTTAAGGATATGCCTCACACAAATTTTATTTCCTGGAGCCGTATGATATTAGCATACACCGTAAACATGGAGAGTGGAAAGGCATTGGATATGTTTTTGAGGATGCGAAAAGGAGTGAAACGAGACCATGTCACCTATATGGGAACTTTATCTGCATATAGCCATGCTGGGCTAGTAAATGAAGGCAAGGCTTATTTCAGTAACATGGTTCATTCTGGTGACAAGAATATTCGACCGAAAGTTGAGAACTGTGCTTGTATGGTAGACCTGCCTCTATAA

Protein Analysis

160

Amino Acids

17.82

Weight (kDa)

6.5

Isoelectric Point (pI)

37.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028706)

Species Orthologous Gene IDs
malus_domestica MD12G1082000.v1.1
pyrus_communis pycom12g06790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 465
AcsI RAATTY 1 cut(s) 223
AjnI CCWGG 1 cut(s) 233
Alw26I GTCTC 2 cut(s) 188, 318
ApoI RAATTY 1 cut(s) 223
AsuHPI GGTGA 2 cut(s) 325, 431
BceAI ACGGC 1 cut(s) 225
BciT130I CCWGG 1 cut(s) 235
BcoDI GTCTC 2 cut(s) 188, 318
BfaI CTAG 2 cut(s) 68, 374
BglI GCCNNNNNGGC 1 cut(s) 53
Bme1390I CCNGG 1 cut(s) 235
BmiI GGNNCC 1 cut(s) 239
BmrFI CCNGG 1 cut(s) 235
BmsI GCATC 2 cut(s) 16, 294
BpmI CTGGAG 1 cut(s) 256
BsaI GGTCTC 1 cut(s) 318
Bse1I ACTGG 1 cut(s) 16
BseBI CCWGG 1 cut(s) 235
BseGI GGATG 1 cut(s) 309
BseMII CTCAG 1 cut(s) 183
BseNI ACTGG 1 cut(s) 16
BseYI CCCAGC 1 cut(s) 368
Bsh1285I CGRYCG 1 cut(s) 437
BsiEI CGRYCG 1 cut(s) 437
BsmAI GTCTC 2 cut(s) 188, 318
Bso31I GGTCTC 1 cut(s) 318
Bsp143I GATC 1 cut(s) 102
BspCNI CTCAG 1 cut(s) 184
BspHI TCATGA 1 cut(s) 105
BspLI GGNNCC 1 cut(s) 239
BspTNI GGTCTC 1 cut(s) 318
BsrI ACTGG 1 cut(s) 16
BssMI GATC 1 cut(s) 102
Bst2UI CCWGG 1 cut(s) 235
Bst4CI ACNGT 2 cut(s) 262, 452
BstDEI CTNAG 1 cut(s) 192
BstF5I GGATG 1 cut(s) 309
BstKTI GATC 1 cut(s) 105
BstMAI GTCTC 2 cut(s) 188, 318
BstMBI GATC 1 cut(s) 102
BstMCI CGRYCG 1 cut(s) 437
BstMWI GCNNNNNNNGC 1 cut(s) 53
BstNI CCWGG 1 cut(s) 235
BstNSI RCATGY 1 cut(s) 167
BstSCI CCNGG 1 cut(s) 233
BtsCI GGATG 1 cut(s) 309
CciI TCATGA 1 cut(s) 105
CviAII CATG 7 cut(s) 106, 164, 187, 268, 329, 365, 406
CviJI RGCY 7 cut(s) 22, 56, 191, 240, 363, 373, 392
CviKI_1 RGCY 7 cut(s) 22, 56, 191, 240, 363, 373, 392
DdeI CTNAG 1 cut(s) 192
DpnI GATC 1 cut(s) 104
DpnII GATC 1 cut(s) 102
Eco31I GGTCTC 1 cut(s) 318
EcoRII CCWGG 1 cut(s) 233
EcoT22I ATGCAT 1 cut(s) 165
FaeI CATG 7 cut(s) 109, 167, 190, 271, 332, 368, 409
FatI CATG 7 cut(s) 105, 163, 186, 267, 328, 364, 405
FblI GTMKAC 1 cut(s) 465
FokI GGATG 1 cut(s) 316
FspBI CTAG 2 cut(s) 68, 374
GsaI CCCAGC 1 cut(s) 372
GsuI CTGGAG 1 cut(s) 256
Hin1II CATG 7 cut(s) 109, 167, 190, 271, 332, 368, 409
HphI GGTGA 2 cut(s) 325, 431
Hpy166II GTNNAC 2 cut(s) 265, 466
Hpy188III TCNNGA 2 cut(s) 106, 155
Hpy8I GTNNAC 2 cut(s) 265, 466
HpyAV CCTTC 1 cut(s) 377
HpyCH4III ACNGT 2 cut(s) 262, 452
HpyCH4V TGCA 4 cut(s) 129, 163, 180, 356
HpyF10VI GCNNNNNNNGC 1 cut(s) 53
HpyF3I CTNAG 1 cut(s) 192
Hsp92II CATG 7 cut(s) 109, 167, 190, 271, 332, 368, 409
Kzo9I GATC 1 cut(s) 102
LmnI GCTCC 1 cut(s) 237
LpnPI CCDG 5 cut(s) 36, 220, 247, 354, 402
LweI GCATC 2 cut(s) 16, 294
MaeI CTAG 2 cut(s) 68, 374
MaeIII GTNAC 3 cut(s) 331, 401, 419
MalI GATC 1 cut(s) 104
MboI GATC 1 cut(s) 102
MboII GAAGA 1 cut(s) 101
MluCI AATT 1 cut(s) 223
MnlI CCTC 2 cut(s) 225, 294
Mph1103I ATGCAT 1 cut(s) 165
MseI TTAA 2 cut(s) 18, 204
MslI CAYNNNNRTG 3 cut(s) 185, 338, 417
MspR9I CCNGG 1 cut(s) 235
MvaI CCWGG 1 cut(s) 235
MwoI GCNNNNNNNGC 1 cut(s) 53
NdeII GATC 1 cut(s) 102
NlaIII CATG 7 cut(s) 109, 167, 190, 271, 332, 368, 409
NlaIV GGNNCC 1 cut(s) 239
NmuCI GTSAC 2 cut(s) 331, 419
NsiI ATGCAT 1 cut(s) 165
NspI RCATGY 1 cut(s) 167
PagI TCATGA 1 cut(s) 105
PflFI GACNNNGTC 1 cut(s) 329
PfoI TCCNGGA 1 cut(s) 233
Psp6I CCWGG 1 cut(s) 233
PspFI CCCAGC 1 cut(s) 368
PspGI CCWGG 1 cut(s) 233
PspN4I GGNNCC 1 cut(s) 239
PsyI GACNNNGTC 1 cut(s) 329
RseI CAYNNNNRTG 3 cut(s) 185, 338, 417
SaqAI TTAA 2 cut(s) 18, 204
Sau3AI GATC 1 cut(s) 102
ScrFI CCNGG 1 cut(s) 235
SetI ASST 2 cut(s) 338, 471
SfaNI GCATC 2 cut(s) 16, 294
SmiMI CAYNNNNRTG 3 cut(s) 185, 338, 417
Sse9I AATT 1 cut(s) 223
SspI AATATT 1 cut(s) 430
SspMI CTAG 2 cut(s) 68, 374
StyD4I CCNGG 1 cut(s) 233
TaaI ACNGT 2 cut(s) 262, 452
TaqI TCGA 1 cut(s) 433
TaqII GACCGA 1 cut(s) 451
TasI AATT 1 cut(s) 223
Tru1I TTAA 2 cut(s) 18, 204
Tru9I TTAA 2 cut(s) 18, 204
TseFI GTSAC 2 cut(s) 331, 419
Tsp45I GTSAC 2 cut(s) 331, 419
TspDTI ATGAA 2 cut(s) 396, 401
Tth111I GACNNNGTC 1 cut(s) 329
XapI RAATTY 1 cut(s) 223
XceI RCATGY 1 cut(s) 167
XmiI GTMKAC 1 cut(s) 465
XspI CTAG 2 cut(s) 68, 374
Zsp2I ATGCAT 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.