pycom12g17310

Protein of unknown function (DUF674)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
19648040 .. 19648312
273 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 273 bp
ATGGAAGGACCATCTAAAGGAATGTTCAAATCCTTCAACAAAAAACGAAGCCAAACTATCTCGCAACAAGCACCTGCCATGGCCCTATATTCCGCCTCTGCTGAAGAGAGCGAAACGGTTTTATGTCGTTTCGTCCGCCAAGAAATCAAAGAACCGCCCAAGAATACACAATACCCAGTAGTCGAACGGCGAGTGATAGGGCAACCTGCCCAATCAGAATCACAAAACGCAGTTAACTTGGTCTGGTTGTCAGAACGAAATAATAAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

91

Amino Acids

10.18

Weight (kDa)

9.51

Isoelectric Point (pI)

79.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 82
Acc36I ACCTGC 2 cut(s) 82, 214
AciI CCGC 3 cut(s) 93, 136, 155
AcuI CTGAAG 1 cut(s) 123
AfiI CCNNNNNNNGG 1 cut(s) 17
AgsI TTSAA 2 cut(s) 28, 37
AoxI GGCC 1 cut(s) 81
AspS9I GGNCC 2 cut(s) 8, 82
AvaII GGWCC 1 cut(s) 8
BccI CCATC 1 cut(s) 19
BceAI ACGGC 1 cut(s) 203
BfuAI ACCTGC 2 cut(s) 82, 214
Bme18I GGWCC 1 cut(s) 8
BmgT120I GGNCC 2 cut(s) 8, 82
BmrI ACTGGG 1 cut(s) 170
BmuI ACTGGG 1 cut(s) 170
BsaJI CCNNGG 1 cut(s) 78
Bsc4I CCNNNNNNNGG 1 cut(s) 17
Bse1I ACTGG 1 cut(s) 176
BseDI CCNNGG 1 cut(s) 78
BseLI CCNNNNNNNGG 1 cut(s) 17
BseNI ACTGG 1 cut(s) 176
BshFI GGCC 1 cut(s) 83
BslI CCNNNNNNNGG 1 cut(s) 17
BsnI GGCC 1 cut(s) 83
Bsp19I CCATGG 1 cut(s) 78
BspACI CCGC 3 cut(s) 93, 136, 155
BspANI GGCC 1 cut(s) 83
BspMI ACCTGC 2 cut(s) 82, 214
BsrI ACTGG 1 cut(s) 176
BssECI CCNNGG 1 cut(s) 78
BssT1I CCWWGG 1 cut(s) 78
Bst4CI ACNGT 1 cut(s) 118
Bst6I CTCTTC 1 cut(s) 99
BstDSI CCRYGG 1 cut(s) 78
BsuRI GGCC 1 cut(s) 83
BtgI CCRYGG 1 cut(s) 78
BveI ACCTGC 2 cut(s) 82, 214
Cfr13I GGNCC 2 cut(s) 8, 82
CviAII CATG 1 cut(s) 79
CviJI RGCY 2 cut(s) 51, 83
CviKI_1 RGCY 2 cut(s) 51, 83
Eam1104I CTCTTC 1 cut(s) 99
EarI CTCTTC 1 cut(s) 99
EciI GGCGGA 2 cut(s) 82, 125
Eco130I CCWWGG 1 cut(s) 78
Eco47I GGWCC 1 cut(s) 8
Eco57I CTGAAG 1 cut(s) 123
EcoT14I CCWWGG 1 cut(s) 78
ErhI CCWWGG 1 cut(s) 78
FaeI CATG 1 cut(s) 82
FaiI YATR 3 cut(s) 80, 88, 124
FatI CATG 1 cut(s) 78
HaeIII GGCC 1 cut(s) 83
Hin1II CATG 1 cut(s) 82
HincII GTYRAC 1 cut(s) 235
HindII GTYRAC 1 cut(s) 235
HinfI GANTC 1 cut(s) 218
HpaI GTTAAC 1 cut(s) 235
Hpy166II GTNNAC 1 cut(s) 235
Hpy188I TCNGA 2 cut(s) 217, 253
Hpy8I GTNNAC 1 cut(s) 235
HpyAV CCTTC 1 cut(s) 43
HpyCH4III ACNGT 1 cut(s) 118
Hsp92II CATG 1 cut(s) 82
KspAI GTTAAC 1 cut(s) 235
LpnPI CCDG 4 cut(s) 87, 189, 219, 229
MboII GAAGA 1 cut(s) 116
MnlI CCTC 1 cut(s) 106
MseI TTAA 1 cut(s) 234
NcoI CCATGG 1 cut(s) 78
NlaIII CATG 1 cut(s) 82
PaqCI CACCTGC 1 cut(s) 82
PfeI GAWTC 1 cut(s) 218
PspPI GGNCC 2 cut(s) 8, 82
SaqAI TTAA 1 cut(s) 234
Sau96I GGNCC 2 cut(s) 8, 82
SetI ASST 3 cut(s) 76, 208, 271
SinI GGWCC 1 cut(s) 8
SsiI CCGC 3 cut(s) 93, 136, 155
StyI CCWWGG 1 cut(s) 78
TaaI ACNGT 1 cut(s) 118
TaqI TCGA 1 cut(s) 183
TfiI GAWTC 1 cut(s) 218
Tru1I TTAA 1 cut(s) 234
Tru9I TTAA 1 cut(s) 234
VpaK11BI GGWCC 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.