pycom13g03260

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
2165893 .. 2168325
2433 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g03260.6

Sequence Viewer

Length: 1851 bp
ATGGACAAAAATATGTCAAATTTGAAGCCTTCAAATTTGATTTTTACTATTTCCAAAGGCATTCCACATTTAAATTTTGATAGCTTATGTGGCACTTTGATATCTTTTAAAATTTTGTTATCCAACCGATATGATAATTGCACCATAATTAAAAAACATTTGAAGCTGTGCATATTAAAAAAACATTTAATAATTAATTGTTATCGCCACATAAGATTTGGCTATATTAATGTGGTTTTTTTTACTGTTATAGCTGATGTGTATATTTTGGCATCTCCTTCGGAGATGCTCTTAAATGTTAGCATATTTAAGTATTATTTTATTATTTTTAAACCAACAACAACCCAACTTTTATTAATTTTGAAAATCTTGACAATATGTCAAATTGCCAAGTTAGCCATCAAATTGAAATTTGATGTTTTGAATTTGACGTCTACTATAAATCCTCAGAAGGAATCTTCCTCAAAATATGTCATCTTGACCTCCAAAATACCCAAAACGTTCAAAAATGTCAAGATGAGCCTTCTTTTCTTCGCTACGGTCAAATGGCTTGATAGAAAAATTTGGAATTTTGATACAATCATCTTGAAAGACTCACGAATATCCTCCAATTGGAATCACTCCAAAATTCCTCCGTTTGATTACTTAAATTTAATATTGAAGTCCAGTATTATTAAGGGAGAAATTAAAAAAAAATGTCTAACTTGGCTTCAAAATGGAAGGATTAGGAGGGATGAGTTTATTTCATGTTTAATAATTTTCTACTCCGCTCTATGTAAAAAAACAAATTCACTTATACTTTCAGTATACCTTGATGTTTTAAAATTATCCATTACAATCCAATCTTATATACTAAACAACCGCATTATTGGCCAAGGAATGAAAAGTATGCAATTTTTGGTCTTTGCCCCGTCTTTCCAAGTATGTAAAATCATGACATTTTCTACCCGCATTATTGCCCAAGAAATGAAAAGTACGCAATTTTTGACCTCAATGGGGGTGGTTACATCAATCGCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAATTTACAATGAATCAAAACCTTTGCATCTTCATTCGGATCTTCCTTCTCTCATCAGAAACCCCTGCATTTGCAGTGGACTTTTACTACCAAAACTGCAGCGTCCCCGCAAATTGTGGCCGCCAAATCATCAGCTTTCCGTTCTACATCCAAGGCAGGCAACAAGACTTCTGCGGCTACCCTGGCTTCCAGCTCTCCTGCCACGGGGGCGCAGGCAATGACGAAGAAGAAGCCTACCCACTTCTCCGGTTGTCCGGTAACGATTACATAATTCACAACATCAGTTACGAAAGCCAGACTCTTGTCGTCTCAAATGCTCTGCTTTCACACTACTTGAACAACTCTGCTTGCACTAATCTCTCACTGATCCATAATTTAACCCTCCCTAATGACCAGTTTAAGCTGGCTCCCAACCAAGATCAATTCTTTCTGCTCTATAACTGCAGCCCTTCGTTTGTCGTTTCTTTTCCAAAGTACAAGATTGGTTGTAATAACACTTCGGTTCTTGCTCTGCCTCGGCAAATATACCCGAAACTTGGAGGTCTTGTGGAGTTTGAAAAATGTGGATCGAGCGAGGTGGCGGTGGCGCATGGTGGAGGGTATGGCAATGATGAGGCGGCGGGTATGAAGGAAGTGTTGGGAAGAGGGTTTAAGATGAAATGGCTGGCTGGTGACTGCAGCCGCTGCCAGAGGAGTGGAGGGCTATGTGGGTTTAACTACACCACCCACCATTTTAGGTGCCTCTGCCCCGATAGGACTCATGCTGTGCTCTGTAGGTACGACGCTGAAAAAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

617

Amino Acids

69.79

Weight (kDa)

9.33

Isoelectric Point (pI)

34.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019118)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66940 AT1G66940 AT1G66940 AT1G66940 AT1G67025 AT1G67025
pyrus_communis pycom13g03260
rosa_samantha Rh3BG285000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 434
AccB1I GGYRCC 1 cut(s) 1791
AccBSI CCGCTC 1 cut(s) 770
AccI GTMKAC 2 cut(s) 434, 807
AclI AACGTT 1 cut(s) 500
AclWI GGATC 3 cut(s) 1100, 1414, 1627
AcoI YGGCCR 2 cut(s) 871, 1171
AcyI GRCGYC 1 cut(s) 431
AfaI GTAC 3 cut(s) 976, 1529, 1832
AfiI CCNNNNNNNGG 4 cut(s) 612, 996, 1257, 1589
AhdI GACNNNNNGTC 1 cut(s) 378
AjnI CCWGG 1 cut(s) 1234
AjuI GAANNNNNNNTTGG 2 cut(s) 1673, 1705
AluBI AGCT 6 cut(s) 84, 166, 254, 1188, 1246, 1456
AluI AGCT 6 cut(s) 84, 166, 254, 1188, 1246, 1456
Alw21I GWGCWC 1 cut(s) 1824
Alw26I GTCTC 1 cut(s) 1366
AlwI GGATC 3 cut(s) 1100, 1414, 1627
AlwNI CAGNNNCTG 1 cut(s) 1737
AoxI GGCC 2 cut(s) 871, 1171
ApeKI GCWGC 4 cut(s) 1152, 1497, 1731, 1737
AseI ATTAAT 3 cut(s) 195, 228, 356
AspLEI GCGC 2 cut(s) 1265, 1642
AsuHPI GGTGA 1 cut(s) 1736
BalI TGGCCA 1 cut(s) 873
BanI GGYRCC 1 cut(s) 1791
BarI GAAGNNNNNNTAC 2 cut(s) 1534, 1566
Bbv12I GWGCWC 1 cut(s) 1824
BbvI GCAGC 4 cut(s) 1164, 1509, 1724, 1743
BccI CCATC 1 cut(s) 407
BcgI CGANNNNNNTGC 2 cut(s) 261, 295
BciT130I CCWGG 1 cut(s) 1236
BcoDI GTCTC 1 cut(s) 1366
BfmI CTRYAG 4 cut(s) 1150, 1495, 1729, 1825
BglI GCCNNNNNGGC 1 cut(s) 1260
BisI GCNGC 8 cut(s) 1153, 1174, 1228, 1498, 1671, 1732, 1735, 1738
BlsI GCNGC 8 cut(s) 1154, 1175, 1229, 1499, 1672, 1733, 1736, 1739
Bme1390I CCNGG 1 cut(s) 1236
BmeRI GACNNNNNGTC 1 cut(s) 378
BmiI GGNNCC 2 cut(s) 1461, 1793
BmrFI CCNGG 1 cut(s) 1236
BmsI GCATC 3 cut(s) 276, 281, 1089
BoxI GACNNNNGTC 1 cut(s) 1355
BsaHI GRCGYC 1 cut(s) 431
BsaJI CCNNGG 5 cut(s) 874, 1204, 1234, 1255, 1568
BsaWI WCCGGW 2 cut(s) 1299, 1307
BsaXI ACNNNNNCTCC 2 cut(s) 1584, 1614
Bsc4I CCNNNNNNNGG 4 cut(s) 612, 996, 1257, 1589
Bse1I ACTGG 2 cut(s) 666, 1447
Bse3DI GCAATG 2 cut(s) 1276, 1666
BseBI CCWGG 1 cut(s) 1236
BseDI CCNNGG 5 cut(s) 874, 1204, 1234, 1255, 1568
BseGI GGATG 2 cut(s) 739, 1200
BseLI CCNNNNNNNGG 4 cut(s) 612, 996, 1257, 1589
BseMI GCAATG 2 cut(s) 1276, 1666
BseMII CTCAG 1 cut(s) 461
BseNI ACTGG 2 cut(s) 666, 1447
BseRI GAGGAG 2 cut(s) 1008, 1759
BseXI GCAGC 4 cut(s) 1164, 1509, 1724, 1743
BshFI GGCC 2 cut(s) 873, 1173
BshNI GGYRCC 1 cut(s) 1791
BsiHKAI GWGCWC 1 cut(s) 1824
BsiSI CCGG 2 cut(s) 1300, 1308
BslFI GGGAC 1 cut(s) 1142
BslI CCNNNNNNNGG 4 cut(s) 612, 996, 1257, 1589
BsmAI GTCTC 1 cut(s) 1366
BsmBI CGTCTC 1 cut(s) 1366
BsmFI GGGAC 1 cut(s) 1142
BsmI GAATGC 1 cut(s) 60
BsnI GGCC 2 cut(s) 873, 1173
Bsp1286I GDGCHC 1 cut(s) 1824
Bsp143I GATC 4 cut(s) 1092, 1419, 1471, 1619
BspANI GGCC 2 cut(s) 873, 1173
BspCNI CTCAG 1 cut(s) 460
BspHI TCATGA 1 cut(s) 933
BspLI GGNNCC 2 cut(s) 1461, 1793
BspMAI CTGCAG 3 cut(s) 1154, 1499, 1733
BspPI GGATC 3 cut(s) 1100, 1414, 1627
BspT107I GGYRCC 1 cut(s) 1791
BsrBI CCGCTC 1 cut(s) 770
BsrDI GCAATG 2 cut(s) 1276, 1666
BsrI ACTGG 2 cut(s) 666, 1447
BssECI CCNNGG 5 cut(s) 874, 1204, 1234, 1255, 1568
BssMI GATC 4 cut(s) 1092, 1419, 1471, 1619
BssNAI GTATAC 1 cut(s) 808
BssNI GRCGYC 1 cut(s) 431
BssT1I CCWWGG 2 cut(s) 874, 1204
Bst1107I GTATAC 1 cut(s) 808
Bst2UI CCWGG 1 cut(s) 1236
Bst4CI ACNGT 2 cut(s) 247, 541
Bst6I CTCTTC 1 cut(s) 1690
BstACI GRCGYC 1 cut(s) 431
BstAPI GCANNNNNTGC 1 cut(s) 1737
BstC8I GCNNGC 5 cut(s) 1211, 1267, 1402, 1458, 1719
BstDEI CTNAG 1 cut(s) 447
BstDSI CCRYGG 1 cut(s) 1255
BstF5I GGATG 2 cut(s) 739, 1200
BstHHI GCGC 2 cut(s) 1265, 1642
BstKTI GATC 4 cut(s) 1095, 1422, 1474, 1622
BstMAI GTCTC 1 cut(s) 1366
BstMBI GATC 4 cut(s) 1092, 1419, 1471, 1619
BstMWI GCNNNNNNNGC 6 cut(s) 90, 395, 870, 1236, 1260, 1737
BstNI CCWGG 1 cut(s) 1236
BstPAI GACNNNNGTC 1 cut(s) 1355
BstSCI CCNGG 1 cut(s) 1234
BstSFI CTRYAG 4 cut(s) 1150, 1495, 1729, 1825
BstV1I GCAGC 4 cut(s) 1164, 1509, 1724, 1743
BstX2I RGATCY 1 cut(s) 1092
BstXI CCANNNNNNTGG 1 cut(s) 1748
BstYI RGATCY 1 cut(s) 1092
BstZ17I GTATAC 1 cut(s) 808
BsuRI GGCC 2 cut(s) 873, 1173
BtgI CCRYGG 1 cut(s) 1255
BtsCI GGATG 2 cut(s) 739, 1200
BtsI GCAGTG 1 cut(s) 1134
BtsIMutI CAGTG 2 cut(s) 1134, 1415
Cac8I GCNNGC 5 cut(s) 1211, 1267, 1402, 1458, 1719
CaiI CAGNNNCTG 1 cut(s) 1737
CciI TCATGA 1 cut(s) 933
CfoI GCGC 2 cut(s) 1265, 1642
CseI GACGC 2 cut(s) 1144, 1844
Csp6I GTAC 3 cut(s) 975, 1528, 1831
CspCI CAANNNNNGTGG 2 cut(s) 981, 1016
CviAII CATG 4 cut(s) 747, 934, 1643, 1814
CviQI GTAC 3 cut(s) 975, 1528, 1831
DdeI CTNAG 1 cut(s) 447
DpnI GATC 4 cut(s) 1094, 1421, 1473, 1621
DpnII GATC 4 cut(s) 1092, 1419, 1471, 1619
DraI TTTAAA 4 cut(s) 72, 109, 331, 822
DriI GACNNNNNGTC 1 cut(s) 378
EaeI YGGCCR 2 cut(s) 871, 1171
Eam1104I CTCTTC 1 cut(s) 1690
Eam1105I GACNNNNNGTC 1 cut(s) 378
EarI CTCTTC 1 cut(s) 1690
Eco130I CCWWGG 2 cut(s) 874, 1204
Eco32I GATATC 1 cut(s) 102
EcoRII CCWGG 1 cut(s) 1234
EcoRV GATATC 1 cut(s) 102
EcoT14I CCWWGG 2 cut(s) 874, 1204
ErhI CCWWGG 2 cut(s) 874, 1204
Esp3I CGTCTC 1 cut(s) 1366
FaeI CATG 4 cut(s) 750, 937, 1646, 1817
FaqI GGGAC 1 cut(s) 1142
FatI CATG 4 cut(s) 746, 933, 1642, 1813
FauI CCCGC 3 cut(s) 956, 1168, 1666
FblI GTMKAC 2 cut(s) 434, 807
Fnu4HI GCNGC 8 cut(s) 1153, 1174, 1228, 1498, 1671, 1732, 1735, 1738
FokI GGATG 2 cut(s) 746, 1187
Fsp4HI GCNGC 8 cut(s) 1153, 1174, 1228, 1498, 1671, 1732, 1735, 1738
GlaI GCGC 2 cut(s) 1264, 1641
GluI GCNGC 8 cut(s) 1153, 1174, 1228, 1498, 1671, 1732, 1735, 1738
HaeIII GGCC 2 cut(s) 873, 1173
HapII CCGG 2 cut(s) 1300, 1308
HgaI GACGC 2 cut(s) 1144, 1844
HhaI GCGC 2 cut(s) 1265, 1642
Hin1I GRCGYC 1 cut(s) 431
Hin1II CATG 4 cut(s) 750, 937, 1646, 1817
Hin6I GCGC 2 cut(s) 1263, 1640
HinP1I GCGC 2 cut(s) 1263, 1640
HinfI GANTC 6 cut(s) 455, 593, 616, 1066, 1351, 1810
HpaII CCGG 2 cut(s) 1300, 1308
HphI GGTGA 1 cut(s) 1736
Hpy166II GTNNAC 3 cut(s) 435, 808, 1132
Hpy188I TCNGA 4 cut(s) 283, 450, 1092, 1111
Hpy188III TCNNGA 6 cut(s) 370, 478, 514, 586, 597, 934
Hpy8I GTNNAC 3 cut(s) 435, 808, 1132
Hpy99I CGWCG 1 cut(s) 1838
HpyAV CCTTC 8 cut(s) 39, 288, 445, 533, 714, 1109, 1512, 1675
HpyCH4III ACNGT 2 cut(s) 247, 541
HpyCH4IV ACGT 2 cut(s) 431, 500
HpyF10VI GCNNNNNNNGC 6 cut(s) 90, 395, 870, 1236, 1260, 1737
HpyF3I CTNAG 1 cut(s) 447
HpySE526I ACGT 2 cut(s) 431, 500
Hsp92I GRCGYC 1 cut(s) 431
Hsp92II CATG 4 cut(s) 750, 937, 1646, 1817
HspAI GCGC 2 cut(s) 1263, 1640
Kzo9I GATC 4 cut(s) 1092, 1419, 1471, 1619
LmnI GCTCC 2 cut(s) 1021, 1465
Lsp1109I GCAGC 4 cut(s) 1164, 1509, 1724, 1743
LweI GCATC 3 cut(s) 276, 281, 1089
MaeII ACGT 2 cut(s) 431, 500
MaeIII GTNAC 4 cut(s) 1003, 1310, 1337, 1724
MalI GATC 4 cut(s) 1094, 1421, 1473, 1621
MbiI CCGCTC 1 cut(s) 770
MboI GATC 4 cut(s) 1092, 1419, 1471, 1619
MboII GAAGA 7 cut(s) 450, 523, 1075, 1087, 1289, 1292, 1707
MfeI CAATTG 1 cut(s) 610
MflI RGATCY 1 cut(s) 1092
MhlI GDGCHC 1 cut(s) 1824
MlsI TGGCCA 1 cut(s) 873
MluNI TGGCCA 1 cut(s) 873
MlyI GAGTC 3 cut(s) 587, 1345, 1804
MmeI TCCRAC 1 cut(s) 147
Mox20I TGGCCA 1 cut(s) 873
MscI TGGCCA 1 cut(s) 873
Msp20I TGGCCA 1 cut(s) 873
MspA1I CMGCKG 1 cut(s) 1737
MspI CCGG 2 cut(s) 1300, 1308
MspR9I CCNGG 1 cut(s) 1236
MunI CAATTG 1 cut(s) 610
Mva1269I GAATGC 1 cut(s) 60
MvaI CCWGG 1 cut(s) 1236
MwoI GCNNNNNNNGC 6 cut(s) 90, 395, 870, 1236, 1260, 1737
NdeII GATC 4 cut(s) 1092, 1419, 1471, 1619
NlaIII CATG 4 cut(s) 750, 937, 1646, 1817
NlaIV GGNNCC 2 cut(s) 1461, 1793
NmeAIII GCCGAG 1 cut(s) 1549
NmuCI GTSAC 1 cut(s) 1724
PagI TCATGA 1 cut(s) 933
PctI GAATGC 1 cut(s) 60
PfeI GAWTC 3 cut(s) 455, 616, 1066
PkrI GCNGC 8 cut(s) 1154, 1175, 1229, 1499, 1672, 1733, 1736, 1739
PleI GAGTC 3 cut(s) 587, 1345, 1804
PpsI GAGTC 3 cut(s) 587, 1345, 1804
PshAI GACNNNNGTC 1 cut(s) 1355
PshBI ATTAAT 3 cut(s) 195, 228, 356
Psp1406I AACGTT 1 cut(s) 500
Psp6I CCWGG 1 cut(s) 1234
PspGI CCWGG 1 cut(s) 1234
PspN4I GGNNCC 2 cut(s) 1461, 1793
PstI CTGCAG 3 cut(s) 1154, 1499, 1733
PstNI CAGNNNCTG 1 cut(s) 1737
PsuI RGATCY 1 cut(s) 1092
RsaI GTAC 3 cut(s) 976, 1529, 1832
RsaNI GTAC 3 cut(s) 975, 1528, 1831
SatI GCNGC 8 cut(s) 1153, 1174, 1228, 1498, 1671, 1732, 1735, 1738
Sau3AI GATC 4 cut(s) 1092, 1419, 1471, 1619
SchI GAGTC 3 cut(s) 587, 1345, 1804
ScrFI CCNGG 1 cut(s) 1236
SduI GDGCHC 1 cut(s) 1824
SfaNI GCATC 3 cut(s) 276, 281, 1089
SfcI CTRYAG 4 cut(s) 1150, 1495, 1729, 1825
SmiI ATTTAAAT 1 cut(s) 72
SspI AATATT 1 cut(s) 657
StyD4I CCNGG 1 cut(s) 1234
StyI CCWWGG 2 cut(s) 874, 1204
SwaI ATTTAAAT 1 cut(s) 72
TaaI ACNGT 2 cut(s) 247, 541
TaiI ACGT 2 cut(s) 434, 503
TaqI TCGA 1 cut(s) 1622
TatI WGTACW 1 cut(s) 1527
TauI GCSGC 4 cut(s) 1176, 1230, 1673, 1737
TfiI GAWTC 3 cut(s) 455, 616, 1066
TscAI CASTG 2 cut(s) 1134, 1422
TseFI GTSAC 1 cut(s) 1724
TseI GCWGC 4 cut(s) 1152, 1497, 1731, 1737
Tsp45I GTSAC 1 cut(s) 1724
TspDTI ATGAA 7 cut(s) 735, 896, 983, 1075, 1079, 1694, 1724
TspGWI ACGGA 2 cut(s) 624, 1182
TspRI CASTG 2 cut(s) 1134, 1422
VspI ATTAAT 3 cut(s) 195, 228, 356
XcmI CCANNNNNNNNNTGG 1 cut(s) 215
XmiI GTMKAC 2 cut(s) 434, 807
ZraI GACGTC 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.