pycom13g10070

translation elongation factor activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
6736060 .. 6736539
480 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 234 bp
ATGCTGATGGAGATAGAGATGGGAGAGGGAGAGGGAGAGAGGGAGACAGAGATAGAGCGACACAGAGAGAAGGAAAGGGAAGAGTGGGCATCTCAGCGCCATTGCTGCAGATCCTTGATCTTCATCGATCCCATCTCCGTGTTCTTCTCAGCCTCTCACAGTCGCAGCATCACTCGCCCACTCACTCATTCACTCACTCACTCACTCACTACAGCTGATATGGCTTCCAAATAA

Protein Analysis

78

Amino Acids

8.95

Weight (kDa)

5.68

Isoelectric Point (pI)

50.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028686)

Species Orthologous Gene IDs
malus_domestica MD04G1237500.v1.1
pyrus_communis pycom13g10070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 105, 122
AluBI AGCT 1 cut(s) 215
AluI AGCT 1 cut(s) 215
Alw26I GTCTC 1 cut(s) 38
AlwI GGATC 2 cut(s) 105, 122
ApeKI GCWGC 2 cut(s) 105, 165
AspLEI GCGC 1 cut(s) 99
BbvI GCAGC 2 cut(s) 92, 177
BccI CCATC 2 cut(s) 13, 140
BcoDI GTCTC 1 cut(s) 38
BfmI CTRYAG 2 cut(s) 106, 210
BfoI RGCGCY 1 cut(s) 100
BisI GCNGC 2 cut(s) 106, 166
BlsI GCNGC 2 cut(s) 107, 167
BmsI GCATC 2 cut(s) 98, 177
Bsa29I ATCGAT 1 cut(s) 126
BsaBI GATNNNNATC 1 cut(s) 122
Bse3DI GCAATG 1 cut(s) 100
Bse8I GATNNNNATC 1 cut(s) 122
BseCI ATCGAT 1 cut(s) 126
BseJI GATNNNNATC 1 cut(s) 122
BseMI GCAATG 1 cut(s) 100
BseMII CTCAG 2 cut(s) 107, 162
BseXI GCAGC 2 cut(s) 92, 177
BshVI ATCGAT 1 cut(s) 126
BsmAI GTCTC 1 cut(s) 38
Bsp143I GATC 3 cut(s) 110, 117, 127
BspCNI CTCAG 2 cut(s) 106, 161
BspDI ATCGAT 1 cut(s) 126
BspMAI CTGCAG 1 cut(s) 110
BspPI GGATC 2 cut(s) 105, 122
BsrDI GCAATG 1 cut(s) 100
BssMI GATC 3 cut(s) 110, 117, 127
Bst4CI ACNGT 1 cut(s) 161
Bst6I CTCTTC 1 cut(s) 75
BstDEI CTNAG 2 cut(s) 93, 148
BstH2I RGCGCY 1 cut(s) 100
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 3 cut(s) 113, 120, 130
BstMAI GTCTC 1 cut(s) 38
BstMBI GATC 3 cut(s) 110, 117, 127
BstMWI GCNNNNNNNGC 3 cut(s) 105, 174, 221
BstSFI CTRYAG 2 cut(s) 106, 210
BstV1I GCAGC 2 cut(s) 92, 177
BstX2I RGATCY 1 cut(s) 110
BstYI RGATCY 1 cut(s) 110
Bsu15I ATCGAT 1 cut(s) 126
BsuTUI ATCGAT 1 cut(s) 126
CfoI GCGC 1 cut(s) 99
ClaI ATCGAT 1 cut(s) 126
CviJI RGCY 3 cut(s) 152, 215, 224
CviKI_1 RGCY 3 cut(s) 152, 215, 224
DdeI CTNAG 2 cut(s) 93, 148
DpnI GATC 3 cut(s) 112, 119, 129
DpnII GATC 3 cut(s) 110, 117, 127
Eam1104I CTCTTC 1 cut(s) 75
EarI CTCTTC 1 cut(s) 75
FaiI YATR 1 cut(s) 221
Fnu4HI GCNGC 2 cut(s) 106, 166
Fsp4HI GCNGC 2 cut(s) 106, 166
GlaI GCGC 1 cut(s) 98
GluI GCNGC 2 cut(s) 106, 166
HaeII RGCGCY 1 cut(s) 100
HhaI GCGC 1 cut(s) 99
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HpyAV CCTTC 1 cut(s) 64
HpyCH4III ACNGT 1 cut(s) 161
HpyCH4V TGCA 1 cut(s) 108
HpyF10VI GCNNNNNNNGC 3 cut(s) 105, 174, 221
HpyF3I CTNAG 2 cut(s) 93, 148
HspAI GCGC 1 cut(s) 97
Kzo9I GATC 3 cut(s) 110, 117, 127
Lsp1109I GCAGC 2 cut(s) 92, 177
LweI GCATC 2 cut(s) 98, 177
MalI GATC 3 cut(s) 112, 119, 129
MboI GATC 3 cut(s) 110, 117, 127
MboII GAAGA 3 cut(s) 92, 112, 136
MflI RGATCY 1 cut(s) 110
MnlI CCTC 4 cut(s) 19, 25, 33, 163
MslI CAYNNNNRTG 1 cut(s) 137
MspA1I CMGCKG 1 cut(s) 215
MwoI GCNNNNNNNGC 3 cut(s) 105, 174, 221
NdeII GATC 3 cut(s) 110, 117, 127
PkrI GCNGC 2 cut(s) 107, 167
PstI CTGCAG 1 cut(s) 110
PsuI RGATCY 1 cut(s) 110
PvuII CAGCTG 1 cut(s) 215
RseI CAYNNNNRTG 1 cut(s) 137
SatI GCNGC 2 cut(s) 106, 166
Sau3AI GATC 3 cut(s) 110, 117, 127
SetI ASST 1 cut(s) 217
SfaNI GCATC 2 cut(s) 98, 177
SfcI CTRYAG 2 cut(s) 106, 210
SgeI CNNG 3 cut(s) 127, 151, 186
SmiMI CAYNNNNRTG 1 cut(s) 137
TaaI ACNGT 1 cut(s) 161
TaqI TCGA 1 cut(s) 126
TseI GCWGC 2 cut(s) 105, 165
TspDTI ATGAA 1 cut(s) 112
TspGWI ACGGA 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.