Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0005881

Physical Location & Seq

Genomic Coordinates Forward (+)

8880938 .. 8884005

Gene Structure 3068 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGGGGTTTTGTATAAGCATCAGATTCGCCGGTTAACGAAAATGAAGAAGTGGTCCGGGGGCTTGTTAATCGTACTTCTTGCTATGATATTGGTTTTTCGATATTCCAGCATTGTCAAAATCGAGCCACCAACACAGGCGCCTAAGCAGTCGGCTGCTGAGTTCTTTGGAAACCATCCAACAACTAATGATTCTGTTATTGTGGATTCGGAGAAGAAAGGAGAAAAGCCATATAAGAAACCCCATTTTGTACAAGTTGATGGGCTGGATGATCTTTTTGCTTCACATGACATTTTCAAAGAAGGGTCGAGGGCCTTGCTTGTATGGCCTCACATGCATACCCTACTCTCTAGGTCCGATGCTTTGCCTGAAACAGCTAAAGGGGTTAAAGAGGCCTCCGTTGCGTGGAAAGACTTGTTGTCTGCAATTGACAAGGACAAGGCTTCCAAATTAAACAAAAGTGATAACGAGGAAGTCAAAAATTGCCCTTTCTCTGTAAGTACTTTTGACAAGATAGAGTCAAGATACGAGAATATACTTGATATCCCTTGTGGCCTCATTGATGATTCTTCCATTTCTTTGGTTGGCATTCCTAATGGGCACTCTAGAAGCTTTCAAATCCAACTCCTAGGCTCCCAACTTTTAGGAGAGTCTGAGCCTCCTATTATCTTGCATTACAACGTCAGTCTCCCCGGTGATAACATGACACAGGAGCCATTTGTAGTTCAAAATACATGGACACATGAACTTGGGTGGGGCAAAGAGGAAAGGTGCCCTTCTCACTGGTCTCCTAGCAACCTCAAAGTTGATGGACTTGTTCTTTGCAATGAACAAGCTGTGAGAAGCTCGTCGGAAGAAAATCTAAATGTGAGTCAGCCTAGTAGGGACATCTTGACCAATGTTTCCGGAGGTGCCTATGAAGGTTCCAATTTCCCATTTGTTGAAGGAAATCCCTTTACCGCCACATTTTGGGTTGGTTCAGAGGGATTTCACTTGACTGTGAACGGAAGGCATGAAACATCTTTTGCGTATAGGGAGAAACTTGAGCCATGGTCGGTTTCCAAAGTCAGAGTGGCCGGTGGTCTGGACCTCTTATCTGCCTTAGCAAAAGGCTTGCCTGTTTCTGAGGATCATGATTTAGTTGATGTTGAGCACCTCAGAGCTCCGCCCACTTTGAAGAAAAGACTATTGATGCTGGTTGGAGTTTTCTCTACTGGAAATAATTTTGAGCGTAGAATGGCTTTGAGGAGGGCTTGGATGCAGTACAAGGCTGTGCGTTCTGGAGATGTGGCTGTCCGGTTTTTCATCGGCCTTCACAAGAACAGCCAAGTCAATATTGAGCTGTGGCGAGAAGCGGAAGCATATGGAGATATCCAACTGATTCCATTTGTTGATTACTACAGCCTGATCAGTTTGAAGACAATTGCAATTTCTATTTTTGGAACCAAAATCCATCCTGCTAAATATATCATGAAAACAGATGATGATGCTTTTGTTAGAATCGATGAAGTGATCTCTAGCCTCAAGGGCAAGCCGACCAAAGGTCTCTTGTATGGTCGAATATCCTTCGAATCTTCACCCGATAGGGACAAAGGCAGCAAATGGTTTATTGATAACCGGGAATGGCCATATGCTATGTACCCACCATGGGCCCATGGTCCAGGCTACATAATCTCTCGGGACATCGCCAAATTCATTGTCCGTAGCCACCAGGAAGGGGATCTCAAGCTCTTTAAACTAGAGGATGTTGCAATGGGAATCTGGATTCAACAATTCAAGTATAGGGGTCAAGAAGTGAATTATGTCACAGACGATAGGTTTTACAATGCTGGATGCGAGGCGAATTATATTCTCGCTCATTACCAAAGCCCGAGATTGGTGTTGTGCCTATGGGAGAAGCTGCAGAAAGAGCACGAGGCCGTCTGCTGTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006029 GO:0006464 GO:0006486 GO:0006493 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009791 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010384 GO:0010404 GO:0010405 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018208 GO:0018258 GO:0019538 GO:0021700 GO:0022414 GO:0022622 GO:0030154 GO:0032501 GO:0032502 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044036 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048354 GO:0048359 GO:0048364 GO:0048468 GO:0048469 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0061458 GO:0070085 GO:0071554 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905392 GO:1990714

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal-bind_lectin Galactosyl_T

Protein Analysis

645

Amino Acids

72.84

Weight (kDa)

6.59

Isoelectric Point (pI)

39.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal-bind_lectin	PF00337	180 - 366	2.7e-26	Galactoside-binding lectin
Galactosyl_T	PF01762	410 - 593	2.4e-37	Galactosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06440 AT3G06440
fragaria_vesca	FvH4_4g20920 FvH4_4g20920 FvH4_4g20920 FvH4_4g20920 FvH4_4g20920
malus_domestica	MD13G1147200.v1.1
prunus_persica	Prupe.1G110700_v2.0.a1 Prupe.1G110700_v2.0.a1 Prupe.1G110700_v2.0.a1 Prupe.1G110700_v2.0.a1 Prupe.1G110700_v2.0.a1 Prupe.1G110700_v2.0.a1 Prupe.1G110700_v2.0.a1
pyrus_communis	pycom13g12660
rosa_chinensis	RchiOBHm_Chr4g0426351
rosa_laevigata	RLG00000007300
rosa_multiflora	Rmu_sc0007942.1_g000009
rosa_roxburghii	Rroxscaffold_5G00368360
rosa_rugosa	Rorug04G0210400 Rorug04G0210400 Rorug04G0210400
rosa_samantha	Rh4AG267400 Rh4BG273300 Rh4CG287500 Rh4DG270000
rosa_wichuraiana	Rw4G023170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	139, 771, 911
AccB7I	CCANNNNNTGG	1 cut(s)	969
AccIII	TCCGGA	1 cut(s)	905
AciI	CCGC	3 cut(s)	960, 1166, 1355
AclWI	GGATC	2 cut(s)	1137, 1728
AcoI	YGGCCR	2 cut(s)	1074, 1625
AcsI	RAATTY	1 cut(s)	1691
AcyI	GRCGYC	1 cut(s)	140
AfaI	GTAC	5 cut(s)	75, 252, 502, 1265, 1640
AfiI	CCNNNNNNNGG	6 cut(s)	405, 969, 1541, 1648, 1717, 1876
AgsI	TTSAA	8 cut(s)	298, 617, 728, 944, 1177, 1417, 1769, 1777
AhdI	GACNNNNNGTC	2 cut(s)	418, 1542
AjnI	CCWGG	2 cut(s)	1660, 1710
AluBI	AGCT	8 cut(s)	377, 612, 836, 846, 1163, 1342, 1729, 1900
AluI	AGCT	8 cut(s)	377, 612, 836, 846, 1163, 1342, 1729, 1900
Alw21I	GWGCWC	3 cut(s)	1155, 1165, 1914
Alw26I	GTCTC	3 cut(s)	692, 792, 1550
AlwI	GGATC	2 cut(s)	1137, 1728
Ama87I	CYCGRG	2 cut(s)	1677, 1870
Aor13HI	TCCGGA	1 cut(s)	905
AoxI	GGCC	9 cut(s)	312, 326, 393, 553, 1074, 1309, 1625, 1650, 1917
ApaI	GGGCCC	1 cut(s)	1654
ApeKI	GCWGC	3 cut(s)	155, 1596, 1900
ApoI	RAATTY	1 cut(s)	1691
ArsI	GACNNNNNNTTYG	4 cut(s)	804, 836, 1683, 1715
AspA2I	CCTAGG	1 cut(s)	628
AspLEI	GCGC	1 cut(s)	142
AspS9I	GGNCC	7 cut(s)	54, 312, 354, 1087, 1650, 1651, 1658
AsuC2I	CCSGG	3 cut(s)	58, 693, 1619
AsuHPI	GGTGA	2 cut(s)	707, 1569
AsuII	TTCGAA	1 cut(s)	1569
AvaI	CYCGRG	2 cut(s)	1677, 1870
AvaII	GGWCC	4 cut(s)	54, 354, 1087, 1658
AvrII	CCTAGG	1 cut(s)	628
BaeGI	GKGCMC	3 cut(s)	603, 776, 1654
BalI	TGGCCA	1 cut(s)	1627
BanI	GGYRCC	3 cut(s)	139, 771, 911
BanII	GRGCYC	2 cut(s)	1165, 1654
BauI	CACGAG	1 cut(s)	1913
BbsI	GAAGAC	1 cut(s)	1424
Bbv12I	GWGCWC	3 cut(s)	1155, 1165, 1914
BbvI	GCAGC	3 cut(s)	142, 1608, 1887
BccI	CCATC	4 cut(s)	183, 254, 803, 1461
BceAI	ACGGC	1 cut(s)	1904
BcgI	CGANNNNNNTGC	4 cut(s)	8, 42, 298, 332
BciT130I	CCWGG	2 cut(s)	1662, 1712
BclI	TGATCA	1 cut(s)	1407
BcnI	CCSGG	3 cut(s)	58, 693, 1619
BcoDI	GTCTC	3 cut(s)	692, 792, 1550
BfaI	CTAG	7 cut(s)	351, 606, 629, 792, 879, 1518, 1739
BfmI	CTRYAG	2 cut(s)	1399, 1901
BfoI	RGCGCY	1 cut(s)	143
BglI	GCCNNNNNGGC	1 cut(s)	1527
BisI	GCNGC	3 cut(s)	156, 1597, 1901
BlnI	CCTAGG	1 cut(s)	628
BlsI	GCNGC	3 cut(s)	157, 1598, 1902
BmcAI	AGTACT	1 cut(s)	502
Bme1390I	CCNGG	5 cut(s)	58, 693, 1619, 1662, 1712
Bme18I	GGWCC	4 cut(s)	54, 354, 1087, 1658
BmeRI	GACNNNNNGTC	2 cut(s)	418, 1542
BmeT110I	CYCGRG	2 cut(s)	1677, 1870
BmgT120I	GGNCC	7 cut(s)	54, 312, 354, 1087, 1650, 1651, 1658
BmiI	GGNNCC	8 cut(s)	141, 634, 714, 773, 913, 925, 1444, 1652
BmrFI	CCNGG	5 cut(s)	58, 693, 1619, 1662, 1712
BmsI	GCATC	6 cut(s)	28, 349, 1182, 1248, 1477, 1823
BpiI	GAAGAC	1 cut(s)	1424
BpmI	CTGGAG	1 cut(s)	1302
Bpu10I	CCTNAGC	2 cut(s)	144, 1102
Bpu14I	TTCGAA	1 cut(s)	1569
BpuEI	CTTGAG	3 cut(s)	1064, 1508, 1709
BpuMI	CCSGG	3 cut(s)	58, 693, 1619
Bsa29I	ATCGAT	1 cut(s)	1503
BsaHI	GRCGYC	1 cut(s)	140
BsaI	GGTCTC	2 cut(s)	792, 1550
BsaJI	CCNNGG	6 cut(s)	57, 628, 691, 1049, 1646, 1654
BsaWI	WCCGGW	2 cut(s)	905, 1296
Bsc4I	CCNNNNNNNGG	6 cut(s)	405, 969, 1541, 1648, 1717, 1876
Bse118I	RCCGGY	2 cut(s)	30, 1076
Bse1I	ACTGG	2 cut(s)	788, 1219
Bse3DI	GCAATG	2 cut(s)	832, 1758
BseAI	TCCGGA	1 cut(s)	905
BseBI	CCWGG	2 cut(s)	1662, 1712
BseCI	ATCGAT	1 cut(s)	1503
BseDI	CCNNGG	6 cut(s)	57, 628, 691, 1049, 1646, 1654
BseGI	GGATG	6 cut(s)	175, 274, 1263, 1453, 1750, 1838
BseLI	CCNNNNNNNGG	6 cut(s)	405, 969, 1541, 1648, 1717, 1876
BseMI	GCAATG	2 cut(s)	832, 1758
BseMII	CTCAG	4 cut(s)	150, 645, 1116, 1171
BseNI	ACTGG	2 cut(s)	788, 1219
BseRI	GAGGAG	1 cut(s)	1261
BseSI	GKGCMC	3 cut(s)	603, 776, 1654
BseXI	GCAGC	3 cut(s)	142, 1608, 1887
BshFI	GGCC	9 cut(s)	314, 328, 395, 555, 1076, 1311, 1627, 1652, 1919
BshNI	GGYRCC	3 cut(s)	139, 771, 911
BshVI	ATCGAT	1 cut(s)	1503
BsiHKAI	GWGCWC	3 cut(s)	1155, 1165, 1914
BsiHKCI	CYCGRG	2 cut(s)	1677, 1870
BsiSI	CCGG	7 cut(s)	31, 57, 693, 906, 1077, 1297, 1618
BslFI	GGGAC	3 cut(s)	899, 1601, 1694
BslI	CCNNNNNNNGG	6 cut(s)	405, 969, 1541, 1648, 1717, 1876
BsmAI	GTCTC	3 cut(s)	692, 792, 1550
BsmFI	GGGAC	3 cut(s)	899, 1601, 1694
BsmI	GAATGC	1 cut(s)	588
BsnI	GGCC	9 cut(s)	314, 328, 395, 555, 1076, 1311, 1627, 1652, 1919
Bso31I	GGTCTC	2 cut(s)	792, 1550
BsoBI	CYCGRG	2 cut(s)	1677, 1870
Bsp119I	TTCGAA	1 cut(s)	1569
Bsp120I	GGGCCC	1 cut(s)	1650
Bsp1286I	GDGCHC	6 cut(s)	603, 776, 1155, 1165, 1654, 1914
Bsp13I	TCCGGA	1 cut(s)	905
Bsp1407I	TGTACA	1 cut(s)	250
Bsp143I	GATC	5 cut(s)	271, 1129, 1407, 1512, 1720
Bsp19I	CCATGG	3 cut(s)	1049, 1646, 1654
BspACI	CCGC	3 cut(s)	960, 1166, 1355
BspANI	GGCC	9 cut(s)	314, 328, 395, 555, 1076, 1311, 1627, 1652, 1919
BspCNI	CTCAG	4 cut(s)	151, 646, 1117, 1170
BspDI	ATCGAT	1 cut(s)	1503
BspEI	TCCGGA	1 cut(s)	905
BspHI	TCATGA	2 cut(s)	1132, 1470
BspLI	GGNNCC	8 cut(s)	141, 634, 714, 773, 913, 925, 1444, 1652
BspMAI	CTGCAG	1 cut(s)	1905
BspPI	GGATC	2 cut(s)	1137, 1728
BspT104I	TTCGAA	1 cut(s)	1569
BspT107I	GGYRCC	3 cut(s)	139, 771, 911
BspTNI	GGTCTC	2 cut(s)	792, 1550
BsrDI	GCAATG	2 cut(s)	832, 1758
BsrFI	RCCGGY	2 cut(s)	30, 1076
BsrGI	TGTACA	1 cut(s)	250
BsrI	ACTGG	2 cut(s)	788, 1219
BssAI	RCCGGY	2 cut(s)	30, 1076
BssECI	CCNNGG	6 cut(s)	57, 628, 691, 1049, 1646, 1654
BssMI	GATC	5 cut(s)	271, 1129, 1407, 1512, 1720
BssNI	GRCGYC	1 cut(s)	140
BssSI	CACGAG	1 cut(s)	1913
BssT1I	CCWWGG	4 cut(s)	628, 1049, 1646, 1654
Bst2BI	CACGAG	1 cut(s)	1913
Bst2UI	CCWGG	2 cut(s)	1662, 1712
Bst4CI	ACNGT	1 cut(s)	1000
BstACI	GRCGYC	1 cut(s)	140
BstAUI	TGTACA	1 cut(s)	250
BstBI	TTCGAA	1 cut(s)	1569
BstC8I	GCNNGC	2 cut(s)	1115, 1532
BstDEI	CTNAG	6 cut(s)	144, 159, 654, 1102, 1125, 1157
BstDSI	CCRYGG	3 cut(s)	1049, 1646, 1654
BstF5I	GGATG	6 cut(s)	175, 274, 1263, 1453, 1750, 1838
BstH2I	RGCGCY	1 cut(s)	143
BstHHI	GCGC	1 cut(s)	142
BstKTI	GATC	5 cut(s)	274, 1132, 1410, 1515, 1723
BstMAI	GTCTC	3 cut(s)	692, 792, 1550
BstMBI	GATC	5 cut(s)	271, 1129, 1407, 1512, 1720
BstMWI	GCNNNNNNNGC	5 cut(s)	325, 334, 401, 1527, 1909
BstNI	CCWGG	2 cut(s)	1662, 1712
BstNSI	RCATGY	1 cut(s)	337
BstSCI	CCNGG	5 cut(s)	56, 691, 1617, 1660, 1710
BstSFI	CTRYAG	2 cut(s)	1399, 1901
BstSLI	GKGCMC	3 cut(s)	603, 776, 1654
BstV1I	GCAGC	3 cut(s)	142, 1608, 1887
BstV2I	GAAGAC	1 cut(s)	1424
BstX2I	RGATCY	1 cut(s)	1720
BstXI	CCANNNNNNTGG	1 cut(s)	580
BstYI	RGATCY	1 cut(s)	1720
Bsu15I	ATCGAT	1 cut(s)	1503
BsuRI	GGCC	9 cut(s)	314, 328, 395, 555, 1076, 1311, 1627, 1652, 1919
BsuTUI	ATCGAT	1 cut(s)	1503
BtgI	CCRYGG	3 cut(s)	1049, 1646, 1654
BtgZI	GCGATG	1 cut(s)	1669
BtsCI	GGATG	6 cut(s)	175, 274, 1263, 1453, 1750, 1838
BtsIMutI	CAGTG	1 cut(s)	781
Cac8I	GCNNGC	2 cut(s)	1115, 1532
CciI	TCATGA	2 cut(s)	1132, 1470
CfoI	GCGC	1 cut(s)	142
Cfr10I	RCCGGY	2 cut(s)	30, 1076
Cfr13I	GGNCC	7 cut(s)	54, 312, 354, 1087, 1650, 1651, 1658
ClaI	ATCGAT	1 cut(s)	1503
Csp6I	GTAC	5 cut(s)	74, 251, 501, 1264, 1639
CviQI	GTAC	5 cut(s)	74, 251, 501, 1264, 1639
DdeI	CTNAG	6 cut(s)	144, 159, 654, 1102, 1125, 1157
DinI	GGCGCC	1 cut(s)	141
DpnI	GATC	5 cut(s)	273, 1131, 1409, 1514, 1722
DpnII	GATC	5 cut(s)	271, 1129, 1407, 1512, 1720
DraI	TTTAAA	1 cut(s)	1735
DriI	GACNNNNNGTC	2 cut(s)	418, 1542
EaeI	YGGCCR	2 cut(s)	1074, 1625
Eam1105I	GACNNNNNGTC	2 cut(s)	418, 1542
EciI	GGCGGA	1 cut(s)	1155
Ecl136II	GAGCTC	1 cut(s)	1163
Eco130I	CCWWGG	4 cut(s)	628, 1049, 1646, 1654
Eco147I	AGGCCT	1 cut(s)	395
Eco24I	GRGCYC	2 cut(s)	1165, 1654
Eco31I	GGTCTC	2 cut(s)	792, 1550
Eco32I	GATATC	2 cut(s)	544, 1372
Eco47I	GGWCC	4 cut(s)	54, 354, 1087, 1658
Eco53kI	GAGCTC	1 cut(s)	1163
Eco88I	CYCGRG	2 cut(s)	1677, 1870
EcoICRI	GAGCTC	1 cut(s)	1163
EcoO109I	RGGNCCY	1 cut(s)	312
EcoRII	CCWGG	2 cut(s)	1660, 1710
EcoRV	GATATC	2 cut(s)	544, 1372
EcoT14I	CCWWGG	4 cut(s)	628, 1049, 1646, 1654
EcoT22I	ATGCAT	1 cut(s)	339
EcoT38I	GRGCYC	2 cut(s)	1165, 1654
EgeI	GGCGCC	1 cut(s)	141
EheI	GGCGCC	1 cut(s)	141
ErhI	CCWWGG	4 cut(s)	628, 1049, 1646, 1654
FalI	AAGNNNNNCTT	2 cut(s)	760, 792
FaqI	GGGAC	3 cut(s)	899, 1601, 1694
FauNDI	CATATG	2 cut(s)	1363, 1630
FbaI	TGATCA	1 cut(s)	1407
Fnu4HI	GCNGC	3 cut(s)	156, 1597, 1901
FokI	GGATG	6 cut(s)	162, 281, 1270, 1440, 1757, 1845
FriOI	GRGCYC	2 cut(s)	1165, 1654
Fsp4HI	GCNGC	3 cut(s)	156, 1597, 1901
FspBI	CTAG	7 cut(s)	351, 606, 629, 792, 879, 1518, 1739
GlaI	GCGC	1 cut(s)	141
GluI	GCNGC	3 cut(s)	156, 1597, 1901
GsuI	CTGGAG	1 cut(s)	1302
HaeII	RGCGCY	1 cut(s)	143
HaeIII	GGCC	9 cut(s)	314, 328, 395, 555, 1076, 1311, 1627, 1652, 1919
HapII	CCGG	7 cut(s)	31, 57, 693, 906, 1077, 1297, 1618
HhaI	GCGC	1 cut(s)	142
Hin1I	GRCGYC	1 cut(s)	140
Hin6I	GCGC	1 cut(s)	140
HinP1I	GCGC	1 cut(s)	140
HincII	GTYRAC	1 cut(s)	36
HindII	GTYRAC	1 cut(s)	36
HindIII	AAGCTT	1 cut(s)	610
HpaI	GTTAAC	1 cut(s)	36
HpaII	CCGG	7 cut(s)	31, 57, 693, 906, 1077, 1297, 1618
HphI	GGTGA	2 cut(s)	707, 1569
Hpy166II	GTNNAC	2 cut(s)	36, 1003
Hpy188I	TCNGA	9 cut(s)	24, 211, 358, 655, 853, 982, 1070, 1126, 1160
Hpy8I	GTNNAC	2 cut(s)	36, 1003
Hpy99I	CGWCG	1 cut(s)	853
HpyAV	CCTTC	8 cut(s)	296, 786, 914, 938, 1002, 1322, 1576, 1709
HpyCH4III	ACNGT	1 cut(s)	1000
HpyCH4IV	ACGT	1 cut(s)	681
HpyCH4V	TGCA	8 cut(s)	337, 425, 673, 825, 1261, 1427, 1751, 1903
HpyF10VI	GCNNNNNNNGC	5 cut(s)	325, 334, 401, 1527, 1909
HpyF3I	CTNAG	6 cut(s)	144, 159, 654, 1102, 1125, 1157
HpySE526I	ACGT	1 cut(s)	681
Hsp92I	GRCGYC	1 cut(s)	140
HspAI	GCGC	1 cut(s)	140
KasI	GGCGCC	1 cut(s)	139
Kpn2I	TCCGGA	1 cut(s)	905
Ksp22I	TGATCA	1 cut(s)	1407
KspAI	GTTAAC	1 cut(s)	36
Kzo9I	GATC	5 cut(s)	271, 1129, 1407, 1512, 1720
LmnI	GCTCC	3 cut(s)	638, 712, 1168
Lsp1109I	GCAGC	3 cut(s)	142, 1608, 1887
LweI	GCATC	6 cut(s)	28, 349, 1182, 1248, 1477, 1823
MaeI	CTAG	7 cut(s)	351, 606, 629, 792, 879, 1518, 1739
MaeII	ACGT	1 cut(s)	681
MaeIII	GTNAC	1 cut(s)	1804
MalI	GATC	5 cut(s)	273, 1131, 1409, 1514, 1722
MboI	GATC	5 cut(s)	271, 1129, 1407, 1512, 1720
MboII	GAAGA	7 cut(s)	58, 226, 561, 866, 1189, 1429, 1566
MfeI	CAATTG	2 cut(s)	426, 1422
MflI	RGATCY	1 cut(s)	1720
MhlI	GDGCHC	6 cut(s)	603, 776, 1155, 1165, 1654, 1914
MlsI	TGGCCA	1 cut(s)	1627
MluNI	TGGCCA	1 cut(s)	1627
Mly113I	GGCGCC	1 cut(s)	140
MlyI	GAGTC	3 cut(s)	527, 659, 880
MmeI	TCCRAC	5 cut(s)	203, 646, 831, 1180, 1399
Mox20I	TGGCCA	1 cut(s)	1627
Mph1103I	ATGCAT	1 cut(s)	339
MroI	TCCGGA	1 cut(s)	905
MscI	TGGCCA	1 cut(s)	1627
MseI	TTAA	5 cut(s)	35, 68, 387, 452, 1734
Msp20I	TGGCCA	1 cut(s)	1627
MspI	CCGG	7 cut(s)	31, 57, 693, 906, 1077, 1297, 1618
MspR9I	CCNGG	5 cut(s)	58, 693, 1619, 1662, 1712
MunI	CAATTG	2 cut(s)	426, 1422
Mva1269I	GAATGC	1 cut(s)	588
MvaI	CCWGG	2 cut(s)	1662, 1712
MwoI	GCNNNNNNNGC	5 cut(s)	325, 334, 401, 1527, 1909
NarI	GGCGCC	1 cut(s)	140
NciI	CCSGG	3 cut(s)	58, 693, 1619
NcoI	CCATGG	3 cut(s)	1049, 1646, 1654
NdeI	CATATG	2 cut(s)	1363, 1630
NdeII	GATC	5 cut(s)	271, 1129, 1407, 1512, 1720
NlaIV	GGNNCC	8 cut(s)	141, 634, 714, 773, 913, 925, 1444, 1652
NmuCI	GTSAC	1 cut(s)	1804
NsiI	ATGCAT	1 cut(s)	339
NspI	RCATGY	1 cut(s)	337
NspV	TTCGAA	1 cut(s)	1569
PagI	TCATGA	2 cut(s)	1132, 1470
PceI	AGGCCT	1 cut(s)	395
PctI	GAATGC	1 cut(s)	588
PfeI	GAWTC	9 cut(s)	25, 191, 206, 566, 1381, 1500, 1571, 1758, 1765
PflMI	CCANNNNNTGG	1 cut(s)	969
PkrI	GCNGC	3 cut(s)	157, 1598, 1902
PleI	GAGTC	3 cut(s)	526, 658, 879
PluTI	GGCGCC	1 cut(s)	143
PpsI	GAGTC	3 cut(s)	526, 658, 879
Psp124BI	GAGCTC	1 cut(s)	1165
Psp6I	CCWGG	2 cut(s)	1660, 1710
PspGI	CCWGG	2 cut(s)	1660, 1710
PspN4I	GGNNCC	8 cut(s)	141, 634, 714, 773, 913, 925, 1444, 1652
PspOMI	GGGCCC	1 cut(s)	1650
PspPI	GGNCC	7 cut(s)	54, 312, 354, 1087, 1650, 1651, 1658
PstI	CTGCAG	1 cut(s)	1905
PsuI	RGATCY	1 cut(s)	1720
RsaI	GTAC	5 cut(s)	75, 252, 502, 1265, 1640
RsaNI	GTAC	5 cut(s)	74, 251, 501, 1264, 1639
SacI	GAGCTC	1 cut(s)	1165
SaqAI	TTAA	5 cut(s)	35, 68, 387, 452, 1734
SatI	GCNGC	3 cut(s)	156, 1597, 1901
Sau3AI	GATC	5 cut(s)	271, 1129, 1407, 1512, 1720
Sau96I	GGNCC	7 cut(s)	54, 312, 354, 1087, 1650, 1651, 1658
ScaI	AGTACT	1 cut(s)	502
SchI	GAGTC	3 cut(s)	527, 659, 880
ScrFI	CCNGG	5 cut(s)	58, 693, 1619, 1662, 1712
SduI	GDGCHC	6 cut(s)	603, 776, 1155, 1165, 1654, 1914
SfaNI	GCATC	6 cut(s)	28, 349, 1182, 1248, 1477, 1823
SfcI	CTRYAG	2 cut(s)	1399, 1901
SfoI	GGCGCC	1 cut(s)	141
SfuI	TTCGAA	1 cut(s)	1569
SinI	GGWCC	4 cut(s)	54, 354, 1087, 1658
SmlI	CTYRAG	3 cut(s)	1043, 1523, 1724
SmoI	CTYRAG	3 cut(s)	1043, 1523, 1724
SseBI	AGGCCT	1 cut(s)	395
SsiI	CCGC	3 cut(s)	960, 1166, 1355
SspDI	GGCGCC	1 cut(s)	139
SspI	AATATT	1 cut(s)	1336
SspMI	CTAG	7 cut(s)	351, 606, 629, 792, 879, 1518, 1739
SstI	GAGCTC	1 cut(s)	1165
StuI	AGGCCT	1 cut(s)	395
StyD4I	CCNGG	5 cut(s)	56, 691, 1617, 1660, 1710
StyI	CCWWGG	4 cut(s)	628, 1049, 1646, 1654
TaaI	ACNGT	1 cut(s)	1000
TaiI	ACGT	1 cut(s)	684
TaqI	TCGA	6 cut(s)	100, 123, 308, 1503, 1558, 1569
TatI	WGTACW	3 cut(s)	250, 500, 1263
TfiI	GAWTC	9 cut(s)	25, 191, 206, 566, 1381, 1500, 1571, 1758, 1765
Tru1I	TTAA	5 cut(s)	35, 68, 387, 452, 1734
Tru9I	TTAA	5 cut(s)	35, 68, 387, 452, 1734
TscAI	CASTG	1 cut(s)	788
TseFI	GTSAC	1 cut(s)	1804
TseI	GCWGC	3 cut(s)	155, 1596, 1900
Tsp45I	GTSAC	1 cut(s)	1804
TspDTI	ATGAA	9 cut(s)	59, 759, 843, 933, 1029, 1294, 1487, 1521, 1684
TspGWI	ACGGA	3 cut(s)	388, 1020, 1691
TspRI	CASTG	1 cut(s)	788
Van91I	CCANNNNNTGG	1 cut(s)	969
VpaK11BI	GGWCC	4 cut(s)	54, 354, 1087, 1658
XapI	RAATTY	1 cut(s)	1691
XbaI	TCTAGA	1 cut(s)	605
XceI	RCATGY	1 cut(s)	337
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1069
XmaJI	CCTAGG	1 cut(s)	628
XspI	CTAG	7 cut(s)	351, 606, 629, 792, 879, 1518, 1739
ZrmI	AGTACT	1 cut(s)	502
Zsp2I	ATGCAT	1 cut(s)	339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.