pycom14g16250

Nuclear ribonuclease

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
18591502 .. 18591923
422 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g16250.2

Sequence Viewer

Length: 222 bp
ATGCGGAGCGCGTTCTTAGATGACTTGGTTAAAGTGGAGCATGCCAGAGACTACGGACACATACATCTATCTGAGGTTCGTCTCCAGAAGAAGTTTGAAAACCGAGCAATTCTTCTTATTCACTTTTCCGCTCGGTACACAGTACAGGAAATTGAACAAGCTGTATCAGCATTGCCGCCTCCTTTAGCAGGCCGAGCTTTTGCGCTTACAGAAGGTATTTGA

Protein Analysis

74

Amino Acids

8.29

Weight (kDa)

6.91

Isoelectric Point (pI)

49.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029302)

Species Orthologous Gene IDs
pyrus_communis pycom06g16780 pycom14g16250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 131
AccII CGCG 1 cut(s) 11
AciI CCGC 3 cut(s) 4, 129, 176
AfaI GTAC 2 cut(s) 137, 144
AfiI CCNNNNNNNGG 1 cut(s) 188
AgsI TTSAA 2 cut(s) 98, 155
AluBI AGCT 2 cut(s) 161, 197
AluI AGCT 2 cut(s) 161, 197
Alw26I GTCTC 2 cut(s) 42, 86
AoxI GGCC 1 cut(s) 190
AspLEI GCGC 2 cut(s) 11, 205
BcoDI GTCTC 2 cut(s) 42, 86
BisI GCNGC 1 cut(s) 176
BlsI GCNGC 1 cut(s) 177
BpmI CTGGAG 1 cut(s) 68
Bsc4I CCNNNNNNNGG 1 cut(s) 188
Bse3DI GCAATG 1 cut(s) 170
BseLI CCNNNNNNNGG 1 cut(s) 188
BseMI GCAATG 1 cut(s) 170
BseMII CTCAG 1 cut(s) 63
Bsh1236I CGCG 1 cut(s) 11
BshFI GGCC 1 cut(s) 192
BslI CCNNNNNNNGG 1 cut(s) 188
BsmAI GTCTC 2 cut(s) 42, 86
BsmBI CGTCTC 1 cut(s) 86
BsnI GGCC 1 cut(s) 192
BspACI CCGC 3 cut(s) 4, 129, 176
BspANI GGCC 1 cut(s) 192
BspCNI CTCAG 1 cut(s) 64
BspFNI CGCG 1 cut(s) 11
BsrBI CCGCTC 1 cut(s) 131
BsrDI GCAATG 1 cut(s) 170
Bst4CI ACNGT 1 cut(s) 142
BstC8I GCNNGC 2 cut(s) 42, 190
BstDEI CTNAG 2 cut(s) 16, 72
BstENI CCTNNNNNAGG 1 cut(s) 186
BstFNI CGCG 1 cut(s) 11
BstHHI GCGC 2 cut(s) 11, 205
BstMAI GTCTC 2 cut(s) 42, 86
BstMWI GCNNNNNNNGC 2 cut(s) 167, 194
BstNSI RCATGY 1 cut(s) 44
BstUI CGCG 1 cut(s) 11
BsuRI GGCC 1 cut(s) 192
Cac8I GCNNGC 2 cut(s) 42, 190
CfoI GCGC 2 cut(s) 11, 205
Csp6I GTAC 2 cut(s) 136, 143
CviAII CATG 1 cut(s) 41
CviJI RGCY 3 cut(s) 161, 192, 197
CviKI_1 RGCY 3 cut(s) 161, 192, 197
CviQI GTAC 2 cut(s) 136, 143
DdeI CTNAG 2 cut(s) 16, 72
EcoNI CCTNNNNNAGG 1 cut(s) 186
Esp3I CGTCTC 1 cut(s) 86
FaeI CATG 1 cut(s) 44
FaiI YATR 2 cut(s) 42, 62
FatI CATG 1 cut(s) 40
Fnu4HI GCNGC 1 cut(s) 176
Fsp4HI GCNGC 1 cut(s) 176
GlaI GCGC 2 cut(s) 10, 204
GluI GCNGC 1 cut(s) 176
GsuI CTGGAG 1 cut(s) 68
HaeIII GGCC 1 cut(s) 192
HhaI GCGC 2 cut(s) 11, 205
Hin1II CATG 1 cut(s) 44
Hin6I GCGC 2 cut(s) 9, 203
HinP1I GCGC 2 cut(s) 9, 203
Hpy166II GTNNAC 1 cut(s) 138
Hpy188I TCNGA 1 cut(s) 73
Hpy188III TCNNGA 1 cut(s) 85
Hpy8I GTNNAC 1 cut(s) 138
HpyAV CCTTC 1 cut(s) 206
HpyCH4III ACNGT 1 cut(s) 142
HpyF10VI GCNNNNNNNGC 2 cut(s) 167, 194
HpyF3I CTNAG 2 cut(s) 16, 72
Hsp92II CATG 1 cut(s) 44
HspAI GCGC 2 cut(s) 9, 203
LmnI GCTCC 2 cut(s) 6, 37
LpnPI CCDG 4 cut(s) 58, 98, 131, 174
MbiI CCGCTC 1 cut(s) 131
MboII GAAGA 2 cut(s) 100, 104
MluCI AATT 2 cut(s) 108, 150
MnlI CCTC 2 cut(s) 67, 189
MseI TTAA 1 cut(s) 30
MvnI CGCG 1 cut(s) 11
MwoI GCNNNNNNNGC 2 cut(s) 167, 194
NlaIII CATG 1 cut(s) 44
NmeAIII GCCGAG 1 cut(s) 218
NspI RCATGY 1 cut(s) 44
PaeI GCATGC 1 cut(s) 44
PkrI GCNGC 1 cut(s) 177
RsaI GTAC 2 cut(s) 137, 144
RsaNI GTAC 2 cut(s) 136, 143
SaqAI TTAA 1 cut(s) 30
SatI GCNGC 1 cut(s) 176
SetI ASST 4 cut(s) 78, 163, 199, 217
SphI GCATGC 1 cut(s) 44
Sse9I AATT 2 cut(s) 108, 150
SsiI CCGC 3 cut(s) 4, 129, 176
TaaI ACNGT 1 cut(s) 142
TasI AATT 2 cut(s) 108, 150
TatI WGTACW 1 cut(s) 142
TauI GCSGC 1 cut(s) 178
Tru1I TTAA 1 cut(s) 30
Tru9I TTAA 1 cut(s) 30
TspGWI ACGGA 1 cut(s) 69
XagI CCTNNNNNAGG 1 cut(s) 186
XceI RCATGY 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.