pycom15g29610

Protein kinase C conserved region 2 (CalB)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
26536803 .. 26538541
1739 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g29610.1

Sequence Viewer

Length: 393 bp
ATGGCAACCACAGTGGGATGGAGGTATGCTGCCACCAATGGCAGCACCCTTACACCTAATGATCTGGAAAGGAATGGTGATGCAAAAGTTCAAGATTCAGAGCCCCCAACACCACATTCTCTTATAAAAATGGGTTCACGAGACCGTAGTAGTAGCATGGAGGATGCAGATGGGACATTGGCAAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAAAGTTCCTCATCTGTACAAGAGAAGGAGTATTCGTTGAAGCAGTTGCTTGAGCTTATTGATACTCGTGAAAATGCTTTCAGTGCTGTTGGATCGATCACTCTCAAGCAGTCCCAGTGCTTGTTTCTCTTCTTCGATCAGGTTCAGTTGGAGTTAAGATACAAGCTGCTACTGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0001101 GO:0002682 GO:0002683 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0005874 GO:0005881 GO:0005886 GO:0005911 GO:0005938 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008017 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009414 GO:0009415 GO:0009506 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009832 GO:0009833 GO:0009856 GO:0009898 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010035 GO:0010038 GO:0010208 GO:0010215 GO:0010330 GO:0010927 GO:0010941 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022402 GO:0022414 GO:0022603 GO:0022607 GO:0030054 GO:0030198 GO:0030243 GO:0030244 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032886 GO:0032989 GO:0032991 GO:0033036 GO:0033043 GO:0033365 GO:0033612 GO:0033692 GO:0034613 GO:0034637 GO:0034645 GO:0036211 GO:0036449 GO:0040007 GO:0042221 GO:0042546 GO:0042742 GO:0042981 GO:0043062 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043622 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044380 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044706 GO:0045229 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048467 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051211 GO:0051239 GO:0051273 GO:0051274 GO:0051301 GO:0051493 GO:0051592 GO:0051641 GO:0051704 GO:0051707 GO:0055028 GO:0055044 GO:0060548 GO:0061458 GO:0061640 GO:0065007 GO:0070507 GO:0070647 GO:0070696 GO:0070726 GO:0070727 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0072697 GO:0072698 GO:0072699 GO:0085029 GO:0090567 GO:0097435 GO:0098542 GO:0098552 GO:0098562 GO:0099080 GO:0099081 GO:0099402 GO:0099512 GO:0099513 GO:0099568 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1902494 GO:1903047 GO:1905421 GO:1990234 GO:1990752 GO:1990778 GO:2000026 GO:2000028 GO:2000067 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

131

Amino Acids

14.49

Weight (kDa)

4.95

Isoelectric Point (pI)

49.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029190)

Species Orthologous Gene IDs
pyrus_communis pycom01g05160 pycom15g29610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 125
AclWI GGATC 1 cut(s) 313
AfaI GTAC 1 cut(s) 231
AgsI TTSAA 2 cut(s) 92, 253
AjuI GAANNNNNNNTTGG 2 cut(s) 100, 132
AluBI AGCT 3 cut(s) 208, 268, 379
AluI AGCT 3 cut(s) 208, 268, 379
Alw26I GTCTC 1 cut(s) 135
AlwI GGATC 1 cut(s) 313
ApeKI GCWGC 5 cut(s) 29, 42, 205, 208, 379
AsuHPI GGTGA 1 cut(s) 89
BanII GRGCYC 1 cut(s) 105
BauI CACGAG 2 cut(s) 138, 279
BbvI GCAGC 5 cut(s) 16, 54, 195, 217, 366
BccI CCATC 2 cut(s) 12, 164
BcoDI GTCTC 1 cut(s) 135
BisI GCNGC 5 cut(s) 30, 43, 206, 209, 380
BlsI GCNGC 5 cut(s) 31, 44, 207, 210, 381
BmrI ACTGGG 1 cut(s) 322
BmsI GCATC 2 cut(s) 70, 154
BmuI ACTGGG 1 cut(s) 322
BpuEI CTTGAG 2 cut(s) 284, 302
Bsa29I ATCGAT 1 cut(s) 308
BsaI GGTCTC 1 cut(s) 135
BsaXI ACNNNNNCTCC 2 cut(s) 233, 263
Bse1I ACTGG 1 cut(s) 328
BseCI ATCGAT 1 cut(s) 308
BseGI GGATG 2 cut(s) 23, 169
BseNI ACTGG 1 cut(s) 328
BseXI GCAGC 5 cut(s) 16, 54, 195, 217, 366
BshVI ATCGAT 1 cut(s) 308
BslFI GGGAC 2 cut(s) 187, 310
BsmAI GTCTC 1 cut(s) 135
BsmFI GGGAC 2 cut(s) 187, 310
Bso31I GGTCTC 1 cut(s) 135
Bsp1286I GDGCHC 1 cut(s) 105
Bsp1407I TGTACA 1 cut(s) 229
Bsp143I GATC 4 cut(s) 61, 305, 309, 349
BspDI ATCGAT 1 cut(s) 308
BspPI GGATC 1 cut(s) 313
BspTNI GGTCTC 1 cut(s) 135
BsrGI TGTACA 1 cut(s) 229
BsrI ACTGG 1 cut(s) 328
BssMI GATC 4 cut(s) 61, 305, 309, 349
BssSI CACGAG 2 cut(s) 138, 279
Bst2BI CACGAG 2 cut(s) 138, 279
Bst4CI ACNGT 3 cut(s) 13, 146, 387
Bst6I CTCTTC 1 cut(s) 347
BstAPI GCANNNNNTGC 1 cut(s) 188
BstAUI TGTACA 1 cut(s) 229
BstF5I GGATG 2 cut(s) 23, 169
BstKTI GATC 4 cut(s) 64, 308, 312, 352
BstMAI GTCTC 1 cut(s) 135
BstMBI GATC 4 cut(s) 61, 305, 309, 349
BstMWI GCNNNNNNNGC 2 cut(s) 188, 296
BstV1I GCAGC 5 cut(s) 16, 54, 195, 217, 366
Bsu15I ATCGAT 1 cut(s) 308
BsuTUI ATCGAT 1 cut(s) 308
BtsCI GGATG 2 cut(s) 23, 169
BtsIMutI CAGTG 3 cut(s) 18, 301, 335
ClaI ATCGAT 1 cut(s) 308
CseI GACGC 1 cut(s) 200
Csp6I GTAC 1 cut(s) 230
CspCI CAANNNNNGTGG 1 cut(s) 29
CviAII CATG 1 cut(s) 157
CviJI RGCY 4 cut(s) 103, 208, 268, 379
CviKI_1 RGCY 4 cut(s) 103, 208, 268, 379
CviQI GTAC 1 cut(s) 230
DpnI GATC 4 cut(s) 63, 307, 311, 351
DpnII GATC 4 cut(s) 61, 305, 309, 349
Eam1104I CTCTTC 1 cut(s) 347
EarI CTCTTC 1 cut(s) 347
Eco24I GRGCYC 1 cut(s) 105
Eco31I GGTCTC 1 cut(s) 135
EcoT22I ATGCAT 1 cut(s) 200
EcoT38I GRGCYC 1 cut(s) 105
FaeI CATG 1 cut(s) 160
FaiI YATR 3 cut(s) 27, 125, 158
FaqI GGGAC 2 cut(s) 187, 310
FatI CATG 1 cut(s) 156
Fnu4HI GCNGC 5 cut(s) 30, 43, 206, 209, 380
FokI GGATG 2 cut(s) 30, 176
FriOI GRGCYC 1 cut(s) 105
Fsp4HI GCNGC 5 cut(s) 30, 43, 206, 209, 380
GluI GCNGC 5 cut(s) 30, 43, 206, 209, 380
HgaI GACGC 1 cut(s) 200
Hin1II CATG 1 cut(s) 160
HinfI GANTC 1 cut(s) 95
HphI GGTGA 1 cut(s) 89
Hpy166II GTNNAC 1 cut(s) 137
Hpy188I TCNGA 1 cut(s) 100
Hpy188III TCNNGA 4 cut(s) 65, 92, 138, 281
Hpy8I GTNNAC 1 cut(s) 137
HpyAV CCTTC 1 cut(s) 232
HpyCH4III ACNGT 3 cut(s) 13, 146, 387
HpyCH4V TGCA 3 cut(s) 83, 167, 198
HpyF10VI GCNNNNNNNGC 2 cut(s) 188, 296
Hsp92II CATG 1 cut(s) 160
Kzo9I GATC 4 cut(s) 61, 305, 309, 349
LpnPI CCDG 3 cut(s) 50, 338, 341
Lsp1109I GCAGC 5 cut(s) 16, 54, 195, 217, 366
LweI GCATC 2 cut(s) 70, 154
MalI GATC 4 cut(s) 63, 307, 311, 351
MboI GATC 4 cut(s) 61, 305, 309, 349
MboII GAAGA 2 cut(s) 334, 337
MhlI GDGCHC 1 cut(s) 105
MmeI TCCRAC 2 cut(s) 283, 342
MnlI CCTC 3 cut(s) 15, 154, 232
Mph1103I ATGCAT 1 cut(s) 200
MseI TTAA 1 cut(s) 368
MspA1I CMGCKG 1 cut(s) 208
MwoI GCNNNNNNNGC 2 cut(s) 188, 296
NdeII GATC 4 cut(s) 61, 305, 309, 349
NlaIII CATG 1 cut(s) 160
NsiI ATGCAT 1 cut(s) 200
PfeI GAWTC 1 cut(s) 95
PkrI GCNGC 5 cut(s) 31, 44, 207, 210, 381
PsiI TTATAA 1 cut(s) 125
PvuII CAGCTG 1 cut(s) 208
RsaI GTAC 1 cut(s) 231
RsaNI GTAC 1 cut(s) 230
SaqAI TTAA 1 cut(s) 368
SatI GCNGC 5 cut(s) 30, 43, 206, 209, 380
Sau3AI GATC 4 cut(s) 61, 305, 309, 349
SduI GDGCHC 1 cut(s) 105
SetI ASST 6 cut(s) 26, 58, 210, 270, 357, 381
SfaNI GCATC 2 cut(s) 70, 154
SmlI CTYRAG 2 cut(s) 263, 317
SmoI CTYRAG 2 cut(s) 263, 317
TaaI ACNGT 3 cut(s) 13, 146, 387
TaqI TCGA 2 cut(s) 308, 348
TatI WGTACW 1 cut(s) 229
TfiI GAWTC 1 cut(s) 95
Tru1I TTAA 1 cut(s) 368
Tru9I TTAA 1 cut(s) 368
TscAI CASTG 3 cut(s) 18, 301, 335
TseI GCWGC 5 cut(s) 29, 42, 205, 208, 379
TspRI CASTG 3 cut(s) 18, 301, 335
Zsp2I ATGCAT 1 cut(s) 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.