Protein present in Fab1, YOTB, Vac1, and EEA1
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1208000.v1.1 |
| pyrus_communis | pycom15g35420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 143 |
| AciI | CCGC | 3 cut(s) | 66, 142, 264 |
| AclWI | GGATC | 3 cut(s) | 105, 122, 135 |
| AcsI | RAATTY | 2 cut(s) | 41, 344 |
| AgsI | TTSAA | 1 cut(s) | 242 |
| AluBI | AGCT | 1 cut(s) | 302 |
| AluI | AGCT | 1 cut(s) | 302 |
| AlwI | GGATC | 3 cut(s) | 105, 122, 135 |
| Ama87I | CYCGRG | 1 cut(s) | 349 |
| ApoI | RAATTY | 2 cut(s) | 41, 344 |
| AsuHPI | GGTGA | 1 cut(s) | 209 |
| AvaI | CYCGRG | 1 cut(s) | 349 |
| BamHI | GGATCC | 1 cut(s) | 127 |
| BccI | CCATC | 1 cut(s) | 169 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 301, 335 |
| BciVI | GTATCC | 1 cut(s) | 89 |
| BfaI | CTAG | 1 cut(s) | 230 |
| BfuAI | ACCTGC | 1 cut(s) | 143 |
| BfuI | GTATCC | 1 cut(s) | 89 |
| BisI | GCNGC | 1 cut(s) | 67 |
| BlsI | GCNGC | 1 cut(s) | 68 |
| BmeT110I | CYCGRG | 1 cut(s) | 349 |
| BmiI | GGNNCC | 3 cut(s) | 61, 129, 157 |
| BmrI | ACTGGG | 1 cut(s) | 230 |
| BmuI | ACTGGG | 1 cut(s) | 230 |
| Bsa29I | ATCGAT | 1 cut(s) | 311 |
| Bse1I | ACTGG | 1 cut(s) | 236 |
| Bse3DI | GCAATG | 1 cut(s) | 222 |
| BseCI | ATCGAT | 1 cut(s) | 311 |
| BseMI | GCAATG | 1 cut(s) | 222 |
| BseNI | ACTGG | 1 cut(s) | 236 |
| BshVI | ATCGAT | 1 cut(s) | 311 |
| BsiHKCI | CYCGRG | 1 cut(s) | 349 |
| BsiSI | CCGG | 1 cut(s) | 63 |
| BsoBI | CYCGRG | 1 cut(s) | 349 |
| Bsp143I | GATC | 4 cut(s) | 46, 110, 127, 308 |
| BspACI | CCGC | 3 cut(s) | 66, 142, 264 |
| BspDI | ATCGAT | 1 cut(s) | 311 |
| BspLI | GGNNCC | 3 cut(s) | 61, 129, 157 |
| BspMI | ACCTGC | 1 cut(s) | 143 |
| BspPI | GGATC | 3 cut(s) | 105, 122, 135 |
| BsrDI | GCAATG | 1 cut(s) | 222 |
| BsrI | ACTGG | 1 cut(s) | 236 |
| BssMI | GATC | 4 cut(s) | 46, 110, 127, 308 |
| BstKTI | GATC | 4 cut(s) | 49, 113, 130, 311 |
| BstMBI | GATC | 4 cut(s) | 46, 110, 127, 308 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 66 |
| BstX2I | RGATCY | 1 cut(s) | 127 |
| BstYI | RGATCY | 1 cut(s) | 127 |
| Bsu15I | ATCGAT | 1 cut(s) | 311 |
| BsuI | GTATCC | 1 cut(s) | 89 |
| BsuTUI | ATCGAT | 1 cut(s) | 311 |
| BtgZI | GCGATG | 1 cut(s) | 188 |
| BveI | ACCTGC | 1 cut(s) | 143 |
| ClaI | ATCGAT | 1 cut(s) | 311 |
| CviAII | CATG | 1 cut(s) | 50 |
| CviJI | RGCY | 5 cut(s) | 60, 69, 221, 233, 302 |
| CviKI_1 | RGCY | 5 cut(s) | 60, 69, 221, 233, 302 |
| DpnI | GATC | 4 cut(s) | 48, 112, 129, 310 |
| DpnII | GATC | 4 cut(s) | 46, 110, 127, 308 |
| Eco88I | CYCGRG | 1 cut(s) | 349 |
| FaeI | CATG | 1 cut(s) | 53 |
| FatI | CATG | 1 cut(s) | 49 |
| FauNDI | CATATG | 1 cut(s) | 133 |
| Fnu4HI | GCNGC | 1 cut(s) | 67 |
| Fsp4HI | GCNGC | 1 cut(s) | 67 |
| FspBI | CTAG | 1 cut(s) | 230 |
| GluI | GCNGC | 1 cut(s) | 67 |
| HapII | CCGG | 1 cut(s) | 63 |
| Hin1II | CATG | 1 cut(s) | 53 |
| HpaII | CCGG | 1 cut(s) | 63 |
| HphI | GGTGA | 1 cut(s) | 209 |
| Hpy188I | TCNGA | 4 cut(s) | 39, 115, 127, 160 |
| Hpy188III | TCNNGA | 1 cut(s) | 9 |
| HpyCH4V | TGCA | 3 cut(s) | 152, 215, 322 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 66 |
| Hsp92II | CATG | 1 cut(s) | 53 |
| Kzo9I | GATC | 4 cut(s) | 46, 110, 127, 308 |
| LmnI | GCTCC | 1 cut(s) | 65 |
| LpnPI | CCDG | 5 cut(s) | 76, 138, 225, 249, 261 |
| MaeI | CTAG | 1 cut(s) | 230 |
| MaeIII | GTNAC | 1 cut(s) | 288 |
| MalI | GATC | 4 cut(s) | 48, 112, 129, 310 |
| MboI | GATC | 4 cut(s) | 46, 110, 127, 308 |
| MboII | GAAGA | 1 cut(s) | 274 |
| MflI | RGATCY | 1 cut(s) | 127 |
| MluCI | AATT | 4 cut(s) | 31, 41, 202, 344 |
| MnlI | CCTC | 1 cut(s) | 188 |
| MseI | TTAA | 1 cut(s) | 147 |
| MslI | CAYNNNNRTG | 1 cut(s) | 54 |
| MspI | CCGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 66 |
| NdeI | CATATG | 1 cut(s) | 133 |
| NdeII | GATC | 4 cut(s) | 46, 110, 127, 308 |
| NlaIII | CATG | 1 cut(s) | 53 |
| NlaIV | GGNNCC | 3 cut(s) | 61, 129, 157 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 170 |
| PkrI | GCNGC | 1 cut(s) | 68 |
| PspN4I | GGNNCC | 3 cut(s) | 61, 129, 157 |
| PsuI | RGATCY | 1 cut(s) | 127 |
| RseI | CAYNNNNRTG | 1 cut(s) | 54 |
| SaqAI | TTAA | 1 cut(s) | 147 |
| SatI | GCNGC | 1 cut(s) | 67 |
| Sau3AI | GATC | 4 cut(s) | 46, 110, 127, 308 |
| SetI | ASST | 4 cut(s) | 89, 157, 199, 304 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 54 |
| Sse9I | AATT | 4 cut(s) | 31, 41, 202, 344 |
| SsiI | CCGC | 3 cut(s) | 66, 142, 264 |
| SspI | AATATT | 1 cut(s) | 330 |
| SspMI | CTAG | 1 cut(s) | 230 |
| TaqI | TCGA | 4 cut(s) | 45, 109, 285, 311 |
| TasI | AATT | 4 cut(s) | 31, 41, 202, 344 |
| TauI | GCSGC | 1 cut(s) | 69 |
| Tru1I | TTAA | 1 cut(s) | 147 |
| Tru9I | TTAA | 1 cut(s) | 147 |
| TspDTI | ATGAA | 1 cut(s) | 30 |
| XapI | RAATTY | 2 cut(s) | 41, 344 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 214 |
| XspI | CTAG | 1 cut(s) | 230 |