pycom16g19780

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0029445
Physical Location & Seq
Reverse (-)
17060211 .. 17060525
315 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 315 bp
ATGCACAACTGCATGCCATGGAAATGGATCACTCTCGTCGTTTTCTTCACCGTAACAGAAATGATGGTGGCTCTGACTCAGTCTCGCATTCCCACCATTCTAGAAGGCCCGTTTGTGCCTGCAACTCGGCGGTTCGATCCATCGCTTCACACAGGTAGCGGGGACTTGCCAATGGACCATCCCAGGCTCAAGAAGAACGTGACATCAAATTTCCCAGAACAGATTGCCCTCGCTATTTCTTCACCTACTGCAATGTGGGTTTCTTGGGTTACTGGTACAAAATTCAAATTCTCAATCTTTGTGTTGTTTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

105

Amino Acids

11.91

Weight (kDa)

9.51

Isoelectric Point (pI)

47.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0029445)

Species Orthologous Gene IDs
pyrus_communis pycom13g20380 pycom16g19780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 130, 159
AclWI GGATC 2 cut(s) 35, 131
AcsI RAATTY 3 cut(s) 208, 281, 287
AfaI GTAC 1 cut(s) 277
AgsI TTSAA 1 cut(s) 286
AjnI CCWGG 1 cut(s) 182
Alw26I GTCTC 1 cut(s) 87
AlwI GGATC 2 cut(s) 35, 131
AoxI GGCC 1 cut(s) 106
ApoI RAATTY 3 cut(s) 208, 281, 287
AspS9I GGNCC 2 cut(s) 107, 175
AsuHPI GGTGA 2 cut(s) 40, 234
AvaII GGWCC 1 cut(s) 175
BccI CCATC 3 cut(s) 58, 148, 186
BciT130I CCWGG 1 cut(s) 184
BcoDI GTCTC 1 cut(s) 87
BfaI CTAG 1 cut(s) 101
Bme1390I CCNGG 1 cut(s) 184
Bme18I GGWCC 1 cut(s) 175
BmgT120I GGNCC 2 cut(s) 107, 175
BmrFI CCNGG 1 cut(s) 184
BpuEI CTTGAG 1 cut(s) 173
BsaJI CCNNGG 2 cut(s) 17, 182
Bse1I ACTGG 1 cut(s) 277
Bse3DI GCAATG 1 cut(s) 258
BseBI CCWGG 1 cut(s) 184
BseDI CCNNGG 2 cut(s) 17, 182
BseGI GGATG 1 cut(s) 178
BseMI GCAATG 1 cut(s) 258
BseMII CTCAG 1 cut(s) 92
BseNI ACTGG 1 cut(s) 277
BshFI GGCC 1 cut(s) 108
BslFI GGGAC 1 cut(s) 176
BsmAI GTCTC 1 cut(s) 87
BsmFI GGGAC 1 cut(s) 176
BsmI GAATGC 1 cut(s) 87
BsnI GGCC 1 cut(s) 108
Bsp143I GATC 2 cut(s) 27, 136
Bsp19I CCATGG 1 cut(s) 17
BspACI CCGC 2 cut(s) 130, 159
BspANI GGCC 1 cut(s) 108
BspCNI CTCAG 1 cut(s) 91
BspPI GGATC 2 cut(s) 35, 131
BsrDI GCAATG 1 cut(s) 258
BsrI ACTGG 1 cut(s) 277
BssECI CCNNGG 2 cut(s) 17, 182
BssMI GATC 2 cut(s) 27, 136
BssT1I CCWWGG 1 cut(s) 17
Bst2UI CCWGG 1 cut(s) 184
Bst4CI ACNGT 1 cut(s) 52
BstC8I GCNNGC 2 cut(s) 14, 120
BstDEI CTNAG 1 cut(s) 78
BstDSI CCRYGG 1 cut(s) 17
BstF5I GGATG 1 cut(s) 178
BstKTI GATC 2 cut(s) 30, 139
BstMAI GTCTC 1 cut(s) 87
BstMBI GATC 2 cut(s) 27, 136
BstNI CCWGG 1 cut(s) 184
BstNSI RCATGY 1 cut(s) 16
BstSCI CCNGG 1 cut(s) 182
BstXI CCANNNNNNTGG 1 cut(s) 24
BsuRI GGCC 1 cut(s) 108
BtgI CCRYGG 1 cut(s) 17
BtgZI GCGATG 1 cut(s) 126
BtsCI GGATG 1 cut(s) 178
Cac8I GCNNGC 2 cut(s) 14, 120
Cfr13I GGNCC 2 cut(s) 107, 175
Csp6I GTAC 1 cut(s) 276
CviAII CATG 2 cut(s) 13, 18
CviJI RGCY 3 cut(s) 71, 108, 187
CviKI_1 RGCY 3 cut(s) 71, 108, 187
CviQI GTAC 1 cut(s) 276
DdeI CTNAG 1 cut(s) 78
DpnI GATC 2 cut(s) 29, 138
DpnII GATC 2 cut(s) 27, 136
Eco130I CCWWGG 1 cut(s) 17
Eco47I GGWCC 1 cut(s) 175
EcoRII CCWGG 1 cut(s) 182
EcoT14I CCWWGG 1 cut(s) 17
ErhI CCWWGG 1 cut(s) 17
FaeI CATG 2 cut(s) 16, 21
FaiI YATR 2 cut(s) 14, 19
FaqI GGGAC 1 cut(s) 176
FatI CATG 2 cut(s) 12, 17
FauI CCCGC 1 cut(s) 152
FokI GGATG 1 cut(s) 165
FspBI CTAG 1 cut(s) 101
HaeIII GGCC 1 cut(s) 108
Hin1II CATG 2 cut(s) 16, 21
HinfI GANTC 1 cut(s) 76
HphI GGTGA 2 cut(s) 40, 234
Hpy188I TCNGA 1 cut(s) 75
Hpy188III TCNNGA 2 cut(s) 101, 190
Hpy99I CGWCG 1 cut(s) 41
HpyAV CCTTC 1 cut(s) 98
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4IV ACGT 1 cut(s) 198
HpyCH4V TGCA 4 cut(s) 4, 12, 122, 251
HpyF3I CTNAG 1 cut(s) 78
HpySE526I ACGT 1 cut(s) 198
Hsp92II CATG 2 cut(s) 16, 21
Kzo9I GATC 2 cut(s) 27, 136
LpnPI CCDG 6 cut(s) 132, 138, 169, 196, 228, 258
MaeI CTAG 1 cut(s) 101
MaeII ACGT 1 cut(s) 198
MaeIII GTNAC 3 cut(s) 52, 199, 268
MalI GATC 2 cut(s) 29, 138
MboI GATC 2 cut(s) 27, 136
MboII GAAGA 3 cut(s) 37, 205, 231
MluCI AATT 3 cut(s) 208, 281, 287
MlyI GAGTC 1 cut(s) 70
MnlI CCTC 1 cut(s) 239
MslI CAYNNNNRTG 1 cut(s) 22
MspR9I CCNGG 1 cut(s) 184
Mva1269I GAATGC 1 cut(s) 87
MvaI CCWGG 1 cut(s) 184
NcoI CCATGG 1 cut(s) 17
NdeII GATC 2 cut(s) 27, 136
NlaIII CATG 2 cut(s) 16, 21
NmeAIII GCCGAG 1 cut(s) 106
NmuCI GTSAC 1 cut(s) 199
NspI RCATGY 1 cut(s) 16
PaeI GCATGC 1 cut(s) 16
PctI GAATGC 1 cut(s) 87
PflFI GACNNNGTC 1 cut(s) 79
PleI GAGTC 1 cut(s) 70
PpsI GAGTC 1 cut(s) 70
Psp6I CCWGG 1 cut(s) 182
PspGI CCWGG 1 cut(s) 182
PspPI GGNCC 2 cut(s) 107, 175
PsyI GACNNNGTC 1 cut(s) 79
RsaI GTAC 1 cut(s) 277
RsaNI GTAC 1 cut(s) 276
RseI CAYNNNNRTG 1 cut(s) 22
Sau3AI GATC 2 cut(s) 27, 136
Sau96I GGNCC 2 cut(s) 107, 175
SchI GAGTC 1 cut(s) 70
ScrFI CCNGG 1 cut(s) 184
SetI ASST 3 cut(s) 157, 201, 247
SinI GGWCC 1 cut(s) 175
SmiMI CAYNNNNRTG 1 cut(s) 22
SmlI CTYRAG 1 cut(s) 188
SmoI CTYRAG 1 cut(s) 188
SphI GCATGC 1 cut(s) 16
Sse9I AATT 3 cut(s) 208, 281, 287
SsiI CCGC 2 cut(s) 130, 159
SspMI CTAG 1 cut(s) 101
StyD4I CCNGG 1 cut(s) 182
StyI CCWWGG 1 cut(s) 17
TaaI ACNGT 1 cut(s) 52
TaiI ACGT 1 cut(s) 201
TaqI TCGA 1 cut(s) 135
TasI AATT 3 cut(s) 208, 281, 287
TseFI GTSAC 1 cut(s) 199
Tsp45I GTSAC 1 cut(s) 199
Tth111I GACNNNGTC 1 cut(s) 79
VpaK11BI GGWCC 1 cut(s) 175
XapI RAATTY 3 cut(s) 208, 281, 287
XbaI TCTAGA 1 cut(s) 100
XceI RCATGY 1 cut(s) 16
XspI CTAG 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.