Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0024663

Physical Location & Seq

Genomic Coordinates Forward (+)

6618768 .. 6622241

Gene Structure 3474 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2805 bp

ATGGGCGATGGAGGCGTCGCATGCATGCCTTTGCAGCATAATATCATGGACAGGTTTCCAATTCAGGAGAAGACTACTGTTTGCGGAGGCAAGAACGGTAACAATGGTAACAATGGATTCAATTCCAAGACGGTTAAGAAGAAGAAGATAGTGAAGGTAATGAAGCCCAAGAAGAAAGTTGTCAAGAACCCTGTGTCTTCAAAGAACGTGGAGTCCGAAAAAAGTGAACTGGGATTGGATAAAGGTGCTAGCAGTGCTACTAAGGAAGCTGAGAATGGTGAAATTGCTGAGGAGAAGGAGGAAGTGGAAGAGGGTGAATTGGGGACTTTGAAGTGGCCCAAAGTTGAAGAAGAGAATGGTGAATTTGTGCCAGAGAAGTCGAGAAGAAGTGAGATTGAGAAGGGAGAGATTGTTGGTGAGAAGTGCAGGAGAAGTGAGGTGGAGAAAGCAGAGTCCTTTTCAGGGAAATGGCGAAGAGGGGACGTAGAGAGAGGAGAGGTTGTTCCAGAGAGGAGCAGAAAAGTCGAAGCTGAATTCGGGTCCTGGAGACCTCCCAAGGATGATATTGAGAAAGGTGAGTTCATTCCAGATAGATGGCAGAAAGGGGAAGGGGCCAGAGATGACTACACTCCCAGTAAATTCCGCAGGTATGATAATGGTAAGGACAGGAGCTGGAAATTTGATCGTGAGCGTACGCCACCTTCGGGGAAGTATTCAAATGATGACCCCTTTAGAAGGAAAGACTTTAATAGAAGTGGAAGCCAGCAGATCAAGAGTATTGCCAGGTGGGAGAGTGGCCCTGACAGGAATACGAGGATCAGTTCCAAAATTGTTGATGAGGACAGTGCGTACAGAAATGAGTACAGCAATGGTAAGTGCCACCCCAGAGAGTACCCTTCTATTAATCGGTTAAAAAGGTTTGGTGCTGATACAAGTATCGGTGAGCGAAAGAACTATGGAGACTATGGGGATTATCCAGGTGCAAAATTTCGTAGGGTTTCTGATGACACCAATCGCTCTGCCCACCCTGAGCATTATTCACGCAGTTCTGTGGAGAGGTCTTATCGGAATCCTTCATCATCAAGAGTTGCAGCAGACAAGTACTCCTCCAGGCCTTATGAATCTACTTTGTCTTCCAGAGTAGTTTATGACAGGCATGGGAGAAGTCCAGGACTTCCAGGTCATTCTGAGCGATCCCCACATGATCGGGCCCGTTATTTTGATCACCGGGACAGAAGCCCATTGCGCCGTGAAAGATCTCCATATATCCATGAGAGGTTTCCATATGGTCGGGAGAAATCACCGTATGGCCGTGAGAAATCACCGCATGGCCGTGAGAAATCACCGCATGGCCGTGAGAAATCACCGCATGGCCGTGAGAAATCACCATATGGCCGCGAGAAATCACCATTCAGGCGCGAGAGATCACCATATGGACGAGAGAGATCTCCTCATGGTCGCGAGAGATCTCCATATGACAGGAGCCATCAATATGATCACAGGAACCGGAGTCTGTCTCCACACGATCGACCTCGATACCATGACCGCAGGAATCGCACTCCAAATTATTTGGAACGGTCCCCTCATGATCGGAGTAGACCTAATAATCATCGAGACACAAGTCGAAAAAGTGGAGCAAGTGAAAGGCGCAACTCCCATCACGGTAATAGGGGGCAAGAAGATAAACCGGTGCAGAAGGATCCCTGTGGAAAAGACTCACATTCGACTGCTAAAGAATCTCTAGATAGAAGCACTGTGCCTGATATTAATGTATCTGTGGAGACAAATTCCAACTGTGAGTCTCACAAAGAAGAACCGTCTCAAATTCCAAGTGTAAATTGCACCGAAAATTCTCATATCAGTGTAGCCCCTCCTGAAGAGCTGCTTTCGATGGAAGAAGATATGGATATATGTGATACACCACCACATGTCCCAGTAATTGCTGATTCATCCACCGGAAAATGGTTTTACCTCGATTATTATGGTGTGGAACGTGGACCTTCAAAATTGTGCGAGCTTAAAGTACTTGTTGAAGAAGGGGCTCTTGTGTCTGACCACATGGTCAAGCACTCGGATAGTGATAGGTGGGTAACTGTTGAAAATGCGGTTTCACCACTGGTGACCATACATTTCCCATCCATTGTATCAGACTCTATAACTCGACTAGTAAGCCCTCCAGAAGCTCCTGGTAATCTATTGGCAGATACCGGGGATACTTCGCAATATGATGCTCAGAGTGGGAAGGAGGCAATCACTTTGCTGCCGCCAGGATTTGGCGCAGATGTTGGTGGAGCTGCTTCTGAGCCTTTAGAAGATCTCCATATTGAAGAAAGGGTTGGAGCTCTGATGGAGGGTTTTGCGGTTATTCCTGGCAGGGAGCTTGAAGCTGTGGGAGAAGTTCTGCAAATGTCATTTGAATATGCACAACGAGATGGATGGGAAAACACTGCAGGTTTCAGTCAAGGCCACGATGCTGAACAGTATGATCGGAAAACCGAGGAACCCGGCTATTCTGACATTAAAATAAAGGAAGCTGCAGAAATCAGGCTGACTGCACCTTCTGACAAGGATGCTGGTTTTGCTTGTGGTGATTCTGATGACTGGTTTTCTGATCGGTGGTCATGCAAGGGTGGTGATTGGAAGAGGAATGAAGAAGCTTCACAGGAGAGGTCTTCTAGGAAGAAATTTGTTGTCAATGATGGTTTCCCATTATGCCAGATGCCAAAGTCTGGTTATGAAGACCCTCGATGGCATAGAAAAGATGAATTGTATTATCCTTCGCAAAGCAGAAGAGTCGGGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009791 GO:0009908 GO:0009987 GO:0010228 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0036211 GO:0042054 GO:0042800 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048443 GO:0048466 GO:0048467 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0051276 GO:0051568 GO:0061458 GO:0071704 GO:0071840 GO:0090567 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SET

Protein Analysis

935

Amino Acids

106.36

Weight (kDa)

7.4

Isoelectric Point (pI)

64.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF_ATXR3	PF25531	653 - 700	2.9e-29	Histone-lysine N-methyltransferase ATXR3, GYF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0024663)

Species	Orthologous Gene IDs
pyrus_communis	pycom09g02640 pycom09g02650 pycom17g08770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1179, 2060
Acc36I	ACCTGC	2 cut(s)	636, 2441
AccB7I	CCANNNNNTGG	2 cut(s)	2273, 2729
AccI	GTMKAC	1 cut(s)	1597
AccII	CGCG	3 cut(s)	1398, 1419, 1461
AclWI	GGATC	4 cut(s)	824, 1188, 1694, 1707
AcoI	YGGCCR	5 cut(s)	1309, 1330, 1351, 1372, 1393
AcsI	RAATTY	9 cut(s)	362, 533, 638, 677, 986, 1786, 1824, 1849, 2684
AcuI	CTGAAG	1 cut(s)	1896
AcyI	GRCGYC	1 cut(s)	15
AfaI	GTAC	6 cut(s)	694, 851, 863, 893, 1103, 2025
AfiI	CCNNNNNNNGG	6 cut(s)	462, 704, 735, 1962, 2273, 2729
AflIII	ACRYGT	1 cut(s)	1927
AgeI	ACCGGT	1 cut(s)	1687
AhlI	ACTAGT	1 cut(s)	2164
AjnI	CCWGG	9 cut(s)	542, 782, 976, 1109, 1168, 1177, 2185, 2266, 2368
AjuI	GAANNNNNNNTTGG	2 cut(s)	2319, 2351
AloI	GAACNNNNNNTCC	4 cut(s)	197, 229, 486, 518
Alw21I	GWGCWC	1 cut(s)	2344
Alw26I	GTCTC	7 cut(s)	541, 954, 1521, 1608, 1775, 1806, 1824
AlwI	GGATC	4 cut(s)	824, 1188, 1694, 1707
AlwNI	CAGNNNCTG	1 cut(s)	672
ApaI	GGGCCC	1 cut(s)	1213
ApeKI	GCWGC	6 cut(s)	34, 1091, 1882, 2260, 2294, 2534
ApoI	RAATTY	9 cut(s)	362, 533, 638, 677, 986, 1786, 1824, 1849, 2684
AseI	ATTAAT	2 cut(s)	903, 1767
AsiGI	ACCGGT	1 cut(s)	1687
AspLEI	GCGC	4 cut(s)	1248, 1419, 1650, 2279
AspS9I	GGNCC	8 cut(s)	336, 540, 612, 797, 1209, 1210, 1578, 1997
AsuC2I	CCSGG	3 cut(s)	1229, 2209, 2505
AsuNHI	GCTAGC	1 cut(s)	248
AvaII	GGWCC	3 cut(s)	540, 1578, 1997
BaeGI	GKGCMC	1 cut(s)	1213
BamHI	GGATCC	1 cut(s)	1699
BanII	GRGCYC	3 cut(s)	1213, 2044, 2344
BarI	GAAGNNNNNNTAC	2 cut(s)	685, 717
BbsI	GAAGAC	5 cut(s)	77, 189, 1125, 2664, 2745
Bbv12I	GWGCWC	1 cut(s)	2344
BbvCI	CCTCAGC	1 cut(s)	288
BbvI	GCAGC	6 cut(s)	46, 1103, 1869, 2247, 2281, 2521
BceAI	ACGGC	5 cut(s)	1233, 1296, 1317, 1338, 1359
BcgI	CGANNNNNNTGC	3 cut(s)	505, 539, 2776
BciT130I	CCWGG	9 cut(s)	544, 784, 978, 1111, 1170, 1179, 2187, 2268, 2370
BciVI	GTATCC	1 cut(s)	2206
BclI	TGATCA	2 cut(s)	1222, 1495
BcnI	CCSGG	3 cut(s)	1229, 2209, 2505
BcoDI	GTCTC	7 cut(s)	541, 954, 1521, 1608, 1775, 1806, 1824
BcuI	ACTAGT	1 cut(s)	2164
BfaI	CTAG	4 cut(s)	249, 1742, 2165, 2676
BfmI	CTRYAG	2 cut(s)	2448, 2535
BfuAI	ACCTGC	2 cut(s)	636, 2441
BfuI	GTATCC	1 cut(s)	2206
BglII	AGATCT	4 cut(s)	1256, 1445, 1466, 2314
BisI	GCNGC	8 cut(s)	35, 1092, 1396, 1883, 2261, 2264, 2295, 2535
BlsI	GCNGC	8 cut(s)	36, 1093, 1397, 1884, 2262, 2265, 2296, 2536
BmcAI	AGTACT	2 cut(s)	1103, 2025
Bme18I	GGWCC	3 cut(s)	540, 1578, 1997
BmgT120I	GGNCC	8 cut(s)	336, 540, 612, 797, 1209, 1210, 1578, 1997
BmiI	GGNNCC	8 cut(s)	541, 613, 1211, 1484, 1505, 1580, 1701, 2502
BmrI	ACTGGG	3 cut(s)	239, 627, 1928
BmsI	GCATC	4 cut(s)	2218, 2461, 2560, 2709
BmtI	GCTAGC	1 cut(s)	252
BmuI	ACTGGG	3 cut(s)	239, 627, 1928
BoxI	GACNNNNGTC	1 cut(s)	1620
BpiI	GAAGAC	5 cut(s)	77, 189, 1125, 2664, 2745
BplI	GAGNNNNNCTC	4 cut(s)	1435, 1467, 1501, 1533
BpmI	CTGGAG	3 cut(s)	565, 1093, 2160
Bpu10I	CCTNAGC	2 cut(s)	288, 1029
BpuMI	CCSGG	3 cut(s)	1229, 2209, 2505
BsaHI	GRCGYC	1 cut(s)	15
BsaI	GGTCTC	1 cut(s)	541
BsaJI	CCNNGG	3 cut(s)	555, 2208, 2496
BsaWI	WCCGGW	3 cut(s)	1506, 1687, 1955
BsaXI	ACNNNNNCTCC	6 cut(s)	396, 426, 486, 516, 1088, 1118
Bsc4I	CCNNNNNNNGG	6 cut(s)	462, 704, 735, 1962, 2273, 2729
Bse118I	RCCGGY	1 cut(s)	1687
Bse1I	ACTGG	5 cut(s)	234, 633, 1934, 2121, 2606
Bse3DI	GCAATG	2 cut(s)	874, 1241
BseBI	CCWGG	9 cut(s)	544, 784, 978, 1111, 1170, 1179, 2187, 2268, 2370
BseDI	CCNNGG	3 cut(s)	555, 2208, 2496
BseGI	GGATG	5 cut(s)	565, 1949, 2135, 2441, 2575
BseLI	CCNNNNNNNGG	6 cut(s)	462, 704, 735, 1962, 2273, 2729
BseMI	GCAATG	2 cut(s)	874, 1241
BseMII	CTCAG	6 cut(s)	261, 279, 1020, 1179, 2246, 2292
BseNI	ACTGG	5 cut(s)	234, 633, 1934, 2121, 2606
BseRI	GAGGAG	5 cut(s)	305, 507, 526, 1096, 1440
BseSI	GKGCMC	1 cut(s)	1213
BseXI	GCAGC	6 cut(s)	46, 1103, 1869, 2247, 2281, 2521
BsgI	GTGCAG	3 cut(s)	445, 1712, 2538
Bsh1236I	CGCG	3 cut(s)	1398, 1419, 1461
Bsh1285I	CGRYCG	1 cut(s)	1528
BshTI	ACCGGT	1 cut(s)	1687
BsiEI	CGRYCG	1 cut(s)	1528
BsiHKAI	GWGCWC	1 cut(s)	2344
BsiSI	CCGG	6 cut(s)	1228, 1507, 1688, 1956, 2208, 2505
BsiWI	CGTACG	1 cut(s)	692
BslFI	GGGAC	5 cut(s)	337, 494, 1244, 1564, 1916
BslI	CCNNNNNNNGG	6 cut(s)	462, 704, 735, 1962, 2273, 2729
BsmAI	GTCTC	7 cut(s)	541, 954, 1521, 1608, 1775, 1806, 1824
BsmBI	CGTCTC	1 cut(s)	1824
BsmFI	GGGAC	5 cut(s)	337, 494, 1244, 1564, 1916
Bso31I	GGTCTC	1 cut(s)	541
Bsp120I	GGGCCC	1 cut(s)	1209
Bsp1286I	GDGCHC	3 cut(s)	1213, 2044, 2344
Bsp68I	TCGCGA	1 cut(s)	1461
BspCNI	CTCAG	6 cut(s)	262, 280, 1021, 1180, 2245, 2293
BspFNI	CGCG	3 cut(s)	1398, 1419, 1461
BspHI	TCATGA	1 cut(s)	1585
BspLI	GGNNCC	8 cut(s)	541, 613, 1211, 1484, 1505, 1580, 1701, 2502
BspMAI	CTGCAG	2 cut(s)	2452, 2539
BspMI	ACCTGC	2 cut(s)	636, 2441
BspOI	GCTAGC	1 cut(s)	252
BspPI	GGATC	4 cut(s)	824, 1188, 1694, 1707
BspQI	GCTCTTC	1 cut(s)	1872
BspTNI	GGTCTC	1 cut(s)	541
BsrDI	GCAATG	2 cut(s)	874, 1241
BsrFI	RCCGGY	1 cut(s)	1687
BsrI	ACTGG	5 cut(s)	234, 633, 1934, 2121, 2606
BssAI	RCCGGY	1 cut(s)	1687
BssECI	CCNNGG	3 cut(s)	555, 2208, 2496
BssNI	GRCGYC	1 cut(s)	15
BssT1I	CCWWGG	1 cut(s)	555
Bst2UI	CCWGG	9 cut(s)	544, 784, 978, 1111, 1170, 1179, 2187, 2268, 2370
Bst6I	CTCTTC	6 cut(s)	303, 345, 469, 1872, 2636, 2785
BstACI	GRCGYC	1 cut(s)	15
BstC8I	GCNNGC	5 cut(s)	22, 26, 250, 764, 2015
BstDEI	CTNAG	7 cut(s)	261, 270, 288, 1029, 1188, 2232, 2301
BstEII	GGTNACC	1 cut(s)	2119
BstENI	CCTNNNNNAGG	1 cut(s)	733
BstF5I	GGATG	5 cut(s)	565, 1949, 2135, 2441, 2575
BstFNI	CGCG	3 cut(s)	1398, 1419, 1461
BstHHI	GCGC	4 cut(s)	1248, 1419, 1650, 2279
BstMAI	GTCTC	7 cut(s)	541, 954, 1521, 1608, 1775, 1806, 1824
BstMCI	CGRYCG	1 cut(s)	1528
BstMWI	GCNNNNNNNGC	7 cut(s)	12, 21, 34, 254, 1245, 1554, 2579
BstNI	CCWGG	9 cut(s)	544, 784, 978, 1111, 1170, 1179, 2187, 2268, 2370
BstNSI	RCATGY	3 cut(s)	24, 28, 1931
BstPAI	GACNNNNGTC	1 cut(s)	1620
BstPI	GGTNACC	1 cut(s)	2119
BstSFI	CTRYAG	2 cut(s)	2448, 2535
BstSLI	GKGCMC	1 cut(s)	1213
BstUI	CGCG	3 cut(s)	1398, 1419, 1461
BstV1I	GCAGC	6 cut(s)	46, 1103, 1869, 2247, 2281, 2521
BstV2I	GAAGAC	5 cut(s)	77, 189, 1125, 2664, 2745
BstX2I	RGATCY	5 cut(s)	1256, 1445, 1466, 1699, 2314
BstXI	CCANNNNNNTGG	1 cut(s)	594
BstYI	RGATCY	5 cut(s)	1256, 1445, 1466, 1699, 2314
BsuI	GTATCC	1 cut(s)	2206
BtgZI	GCGATG	1 cut(s)	21
BtsCI	GGATG	5 cut(s)	565, 1949, 2135, 2441, 2575
BtsI	GCAGTG	2 cut(s)	259, 2445
BtsIMutI	CAGTG	6 cut(s)	259, 850, 1752, 1867, 2114, 2445
BtuMI	TCGCGA	1 cut(s)	1461
BveI	ACCTGC	2 cut(s)	636, 2441
Cac8I	GCNNGC	5 cut(s)	22, 26, 250, 764, 2015
CaiI	CAGNNNCTG	1 cut(s)	672
CciI	TCATGA	1 cut(s)	1585
CfoI	GCGC	4 cut(s)	1248, 1419, 1650, 2279
Cfr10I	RCCGGY	1 cut(s)	1687
Cfr13I	GGNCC	8 cut(s)	336, 540, 612, 797, 1209, 1210, 1578, 1997
CseI	GACGC	1 cut(s)	4
Csp6I	GTAC	6 cut(s)	693, 850, 862, 892, 1102, 2024
CspAI	ACCGGT	1 cut(s)	1687
CspCI	CAANNNNNGTGG	2 cut(s)	189, 224
CviQI	GTAC	6 cut(s)	693, 850, 862, 892, 1102, 2024
DdeI	CTNAG	7 cut(s)	261, 270, 288, 1029, 1188, 2232, 2301
DrdI	GACNNNNNNGTC	2 cut(s)	1179, 2060
DseDI	GACNNNNNNGTC	2 cut(s)	1179, 2060
EaeI	YGGCCR	5 cut(s)	1309, 1330, 1351, 1372, 1393
Eam1104I	CTCTTC	6 cut(s)	303, 345, 469, 1872, 2636, 2785
EarI	CTCTTC	6 cut(s)	303, 345, 469, 1872, 2636, 2785
Ecl136II	GAGCTC	1 cut(s)	2342
Eco130I	CCWWGG	1 cut(s)	555
Eco147I	AGGCCT	1 cut(s)	1114
Eco24I	GRGCYC	3 cut(s)	1213, 2044, 2344
Eco31I	GGTCTC	1 cut(s)	541
Eco47I	GGWCC	3 cut(s)	540, 1578, 1997
Eco53kI	GAGCTC	1 cut(s)	2342
Eco57I	CTGAAG	1 cut(s)	1896
Eco91I	GGTNACC	1 cut(s)	2119
EcoICRI	GAGCTC	1 cut(s)	2342
EcoNI	CCTNNNNNAGG	1 cut(s)	733
EcoO109I	RGGNCCY	1 cut(s)	540
EcoO65I	GGTNACC	1 cut(s)	2119
EcoRI	GAATTC	1 cut(s)	533
EcoRII	CCWGG	9 cut(s)	542, 782, 976, 1109, 1168, 1177, 2185, 2266, 2368
EcoT14I	CCWWGG	1 cut(s)	555
EcoT22I	ATGCAT	1 cut(s)	26
EcoT38I	GRGCYC	3 cut(s)	1213, 2044, 2344
ErhI	CCWWGG	1 cut(s)	555
Esp3I	CGTCTC	1 cut(s)	1824
FalI	AAGNNNNNCTT	4 cut(s)	1869, 1901, 2028, 2060
FaqI	GGGAC	5 cut(s)	337, 494, 1244, 1564, 1916
FauNDI	CATATG	4 cut(s)	1285, 1390, 1432, 1474
FbaI	TGATCA	2 cut(s)	1222, 1495
FblI	GTMKAC	1 cut(s)	1597
Fnu4HI	GCNGC	8 cut(s)	35, 1092, 1396, 1883, 2261, 2264, 2295, 2535
FokI	GGATG	5 cut(s)	572, 1936, 2122, 2448, 2582
FriOI	GRGCYC	3 cut(s)	1213, 2044, 2344
Fsp4HI	GCNGC	8 cut(s)	35, 1092, 1396, 1883, 2261, 2264, 2295, 2535
FspBI	CTAG	4 cut(s)	249, 1742, 2165, 2676
GlaI	GCGC	4 cut(s)	1247, 1418, 1649, 2278
GluI	GCNGC	8 cut(s)	35, 1092, 1396, 1883, 2261, 2264, 2295, 2535
GsuI	CTGGAG	3 cut(s)	565, 1093, 2160
HapII	CCGG	6 cut(s)	1228, 1507, 1688, 1956, 2208, 2505
HgaI	GACGC	1 cut(s)	4
HhaI	GCGC	4 cut(s)	1248, 1419, 1650, 2279
Hin1I	GRCGYC	1 cut(s)	15
Hin6I	GCGC	4 cut(s)	1246, 1417, 1648, 2277
HinP1I	GCGC	4 cut(s)	1246, 1417, 1648, 2277
HindIII	AAGCTT	1 cut(s)	2655
HpaII	CCGG	6 cut(s)	1228, 1507, 1688, 1956, 2208, 2505
Hpy166II	GTNNAC	3 cut(s)	227, 1598, 1997
Hpy8I	GTNNAC	3 cut(s)	227, 1598, 1997
Hpy99I	CGWCG	1 cut(s)	20
HpyCH4IV	ACGT	3 cut(s)	207, 483, 1993
HpyF10VI	GCNNNNNNNGC	7 cut(s)	12, 21, 34, 254, 1245, 1554, 2579
HpyF3I	CTNAG	7 cut(s)	261, 270, 288, 1029, 1188, 2232, 2301
HpySE526I	ACGT	3 cut(s)	207, 483, 1993
Hsp92I	GRCGYC	1 cut(s)	15
HspAI	GCGC	4 cut(s)	1246, 1417, 1648, 2277
Ksp22I	TGATCA	2 cut(s)	1222, 1495
LguI	GCTCTTC	1 cut(s)	1872
LmnI	GCTCC	8 cut(s)	513, 669, 1482, 1634, 2188, 2291, 2339, 2377
Lsp1109I	GCAGC	6 cut(s)	46, 1103, 1869, 2247, 2281, 2521
LweI	GCATC	4 cut(s)	2218, 2461, 2560, 2709
MaeI	CTAG	4 cut(s)	249, 1742, 2165, 2676
MaeII	ACGT	3 cut(s)	207, 483, 1993
MaeIII	GTNAC	4 cut(s)	98, 107, 2089, 2119
MflI	RGATCY	5 cut(s)	1256, 1445, 1466, 1699, 2314
MhlI	GDGCHC	3 cut(s)	1213, 2044, 2344
MlyI	GAGTC	7 cut(s)	221, 461, 1519, 1709, 1808, 2144, 2802
MmeI	TCCRAC	2 cut(s)	1815, 2317
Mph1103I	ATGCAT	1 cut(s)	26
MseI	TTAA	7 cut(s)	135, 747, 903, 911, 1767, 2019, 2520
MslI	CAYNNNNRTG	5 cut(s)	1332, 1353, 1374, 1491, 1860
MspI	CCGG	6 cut(s)	1228, 1507, 1688, 1956, 2208, 2505
MvaI	CCWGG	9 cut(s)	544, 784, 978, 1111, 1170, 1179, 2187, 2268, 2370
MvnI	CGCG	3 cut(s)	1398, 1419, 1461
MwoI	GCNNNNNNNGC	7 cut(s)	12, 21, 34, 254, 1245, 1554, 2579
NciI	CCSGG	3 cut(s)	1229, 2209, 2505
NdeI	CATATG	4 cut(s)	1285, 1390, 1432, 1474
NheI	GCTAGC	1 cut(s)	248
NlaIV	GGNNCC	8 cut(s)	541, 613, 1211, 1484, 1505, 1580, 1701, 2502
NmuCI	GTSAC	1 cut(s)	2119
NruI	TCGCGA	1 cut(s)	1461
NsiI	ATGCAT	1 cut(s)	26
NspI	RCATGY	3 cut(s)	24, 28, 1931
PaeI	GCATGC	2 cut(s)	24, 28
PagI	TCATGA	1 cut(s)	1585
PceI	AGGCCT	1 cut(s)	1114
PciI	ACATGT	1 cut(s)	1927
PciSI	GCTCTTC	1 cut(s)	1872
PcsI	WCGNNNNNNNCGW	1 cut(s)	213
PfeI	GAWTC	7 cut(s)	117, 1069, 1121, 1552, 1736, 1946, 2591
Pfl23II	CGTACG	1 cut(s)	692
PflMI	CCANNNNNTGG	2 cut(s)	2273, 2729
PfoI	TCCNGGA	2 cut(s)	542, 1168
PinAI	ACCGGT	1 cut(s)	1687
PkrI	GCNGC	8 cut(s)	36, 1093, 1397, 1884, 2262, 2265, 2296, 2536
Ple19I	CGATCG	1 cut(s)	1528
PleI	GAGTC	7 cut(s)	220, 460, 1518, 1709, 1807, 2144, 2801
PpsI	GAGTC	7 cut(s)	220, 460, 1518, 1709, 1807, 2144, 2801
PpuMI	RGGWCCY	1 cut(s)	540
PscI	ACATGT	1 cut(s)	1927
PshAI	GACNNNNGTC	1 cut(s)	1620
PshBI	ATTAAT	2 cut(s)	903, 1767
Psp124BI	GAGCTC	1 cut(s)	2344
Psp5II	RGGWCCY	1 cut(s)	540
Psp6I	CCWGG	9 cut(s)	542, 782, 976, 1109, 1168, 1177, 2185, 2266, 2368
PspEI	GGTNACC	1 cut(s)	2119
PspGI	CCWGG	9 cut(s)	542, 782, 976, 1109, 1168, 1177, 2185, 2266, 2368
PspLI	CGTACG	1 cut(s)	692
PspN4I	GGNNCC	8 cut(s)	541, 613, 1211, 1484, 1505, 1580, 1701, 2502
PspOMI	GGGCCC	1 cut(s)	1209
PspPI	GGNCC	8 cut(s)	336, 540, 612, 797, 1209, 1210, 1578, 1997
PspPPI	RGGWCCY	1 cut(s)	540
PstI	CTGCAG	2 cut(s)	2452, 2539
PstNI	CAGNNNCTG	1 cut(s)	672
PsuI	RGATCY	5 cut(s)	1256, 1445, 1466, 1699, 2314
PvuI	CGATCG	1 cut(s)	1528
RruI	TCGCGA	1 cut(s)	1461
RsaI	GTAC	6 cut(s)	694, 851, 863, 893, 1103, 2025
RsaNI	GTAC	6 cut(s)	693, 850, 862, 892, 1102, 2024
RseI	CAYNNNNRTG	5 cut(s)	1332, 1353, 1374, 1491, 1860
SacI	GAGCTC	1 cut(s)	2344
SapI	GCTCTTC	1 cut(s)	1872
SaqAI	TTAA	7 cut(s)	135, 747, 903, 911, 1767, 2019, 2520
SatI	GCNGC	8 cut(s)	35, 1092, 1396, 1883, 2261, 2264, 2295, 2535
Sau96I	GGNCC	8 cut(s)	336, 540, 612, 797, 1209, 1210, 1578, 1997
ScaI	AGTACT	2 cut(s)	1103, 2025
SchI	GAGTC	7 cut(s)	221, 461, 1519, 1709, 1808, 2144, 2802
SduI	GDGCHC	3 cut(s)	1213, 2044, 2344
SfaNI	GCATC	4 cut(s)	2218, 2461, 2560, 2709
SfcI	CTRYAG	2 cut(s)	2448, 2535
SinI	GGWCC	3 cut(s)	540, 1578, 1997
SmiMI	CAYNNNNRTG	5 cut(s)	1332, 1353, 1374, 1491, 1860
SpeI	ACTAGT	1 cut(s)	2164
SphI	GCATGC	2 cut(s)	24, 28
SseBI	AGGCCT	1 cut(s)	1114
SspMI	CTAG	4 cut(s)	249, 1742, 2165, 2676
SstI	GAGCTC	1 cut(s)	2344
StuI	AGGCCT	1 cut(s)	1114
StyI	CCWWGG	1 cut(s)	555
TaiI	ACGT	3 cut(s)	210, 486, 1996
TatI	WGTACW	3 cut(s)	861, 1101, 2023
TauI	GCSGC	2 cut(s)	1398, 2266
TfiI	GAWTC	7 cut(s)	117, 1069, 1121, 1552, 1736, 1946, 2591
Tru1I	TTAA	7 cut(s)	135, 747, 903, 911, 1767, 2019, 2520
Tru9I	TTAA	7 cut(s)	135, 747, 903, 911, 1767, 2019, 2520
TscAI	CASTG	6 cut(s)	259, 850, 1759, 1867, 2121, 2452
TseFI	GTSAC	1 cut(s)	2119
TseI	GCWGC	6 cut(s)	34, 1091, 1882, 2260, 2294, 2534
Tsp45I	GTSAC	1 cut(s)	2119
TspDTI	ATGAA	8 cut(s)	176, 571, 1065, 1134, 1938, 2664, 2751, 2778
TspRI	CASTG	6 cut(s)	259, 850, 1759, 1867, 2121, 2452
Van91I	CCANNNNNTGG	2 cut(s)	2273, 2729
VpaK11BI	GGWCC	3 cut(s)	540, 1578, 1997
VspI	ATTAAT	2 cut(s)	903, 1767
XagI	CCTNNNNNAGG	1 cut(s)	733
XapI	RAATTY	9 cut(s)	362, 533, 638, 677, 986, 1786, 1824, 1849, 2684
XbaI	TCTAGA	1 cut(s)	1741
XceI	RCATGY	3 cut(s)	24, 28, 1931
XmiI	GTMKAC	1 cut(s)	1597
XspI	CTAG	4 cut(s)	249, 1742, 2165, 2676
ZrmI	AGTACT	2 cut(s)	1103, 2025
Zsp2I	ATGCAT	1 cut(s)	26

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.