pycom17g19370

Anthranilate N-benzoyltransferase protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0021199
Physical Location & Seq
Forward (+)
17197625 .. 17198416
792 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g19370.1

Sequence Viewer

Length: 549 bp
ATGGCGCGAGGAGAGTTCAAGGTGACTATGAGCAAGCAAGAAGTGGTAGCAGCTGCCTTGCCATTGCAAGAGCATTGGCTACCACTCTCCAATCTTGACTTGCTTTTGCCACCTCTGGACGTGGGAGTTTTCTTTTGCTACAATAATAAGCAAAGCATGAGCTTTGGGTCCATGGTTGGGGTTCTGAAGAATGCCATGGCTCAAGCTCTTGTGACTTTCTACGCCTTCTCTGGTGAGGTAGTGCCGAACTCTGTCGGGGAGCCCGAGATTCTATGCAACAACCGCGGTGTTGATTTCGCTGAAGCTTTTGCAGATGTTGAGCTTAAGGAGCTTAACCTTTATGACCCTGATGAGAGCATTGAGGGCAAATTGGTGCCCAACAAGAACCAAGGCATATTGGCTGTCCAGGTCTGTGTCTTATTATCTCATGTCATTTACATGTTACAGGCAACTGAGCTTAAGTGTGGTGGCATAGTGGTGGCATGCACATTTGATCGATCGCATAGCAGATGCCTACTCAACCAACATGTTTCTGGTGTCATGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

183

Amino Acids

19.86

Weight (kDa)

5.0

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 165 5.5e-38 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021199)

Species Orthologous Gene IDs
malus_domestica MD17G1157300.v1.1
pyrus_communis pycom17g19370
rosa_chinensis RchiOBHm_Chr2g0128241
rosa_samantha Rh2BG339800 Rh2CG318800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 373
AccII CGCG 2 cut(s) 7, 285
AciI CCGC 2 cut(s) 283, 285
AcuI CTGAAG 2 cut(s) 206, 321
AfiI CCNNNNNNNGG 1 cut(s) 177
AflII CTTAAG 2 cut(s) 323, 458
AflIII ACRYGT 2 cut(s) 438, 526
AgsI TTSAA 1 cut(s) 19
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 1 cut(s) 405
AluBI AGCT 7 cut(s) 53, 162, 206, 305, 322, 331, 457
AluI AGCT 7 cut(s) 53, 162, 206, 305, 322, 331, 457
Ama87I CYCGRG 1 cut(s) 263
ApeKI GCWGC 2 cut(s) 50, 53
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 1 cut(s) 168
AsuHPI GGTGA 2 cut(s) 34, 245
AvaI CYCGRG 1 cut(s) 263
AvaII GGWCC 1 cut(s) 168
BaeGI GKGCMC 1 cut(s) 378
BanI GGYRCC 1 cut(s) 373
BanII GRGCYC 1 cut(s) 264
BbvI GCAGC 2 cut(s) 40, 62
BciT130I CCWGG 1 cut(s) 407
BfrI CTTAAG 2 cut(s) 323, 458
BisI GCNGC 2 cut(s) 51, 54
BlsI GCNGC 2 cut(s) 52, 55
Bme1390I CCNGG 1 cut(s) 407
Bme18I GGWCC 1 cut(s) 168
BmeT110I CYCGRG 1 cut(s) 263
BmgBI CACGTC 1 cut(s) 121
BmgT120I GGNCC 1 cut(s) 168
BmiI GGNNCC 3 cut(s) 169, 261, 375
BmrFI CCNGG 1 cut(s) 407
BmsI GCATC 1 cut(s) 500
BpuEI CTTGAG 1 cut(s) 186
Bsa29I ATCGAT 1 cut(s) 496
BsaJI CCNNGG 4 cut(s) 171, 195, 283, 388
Bsc4I CCNNNNNNNGG 1 cut(s) 177
Bse3DI GCAATG 1 cut(s) 62
BseBI CCWGG 1 cut(s) 407
BseCI ATCGAT 1 cut(s) 496
BseDI CCNNGG 4 cut(s) 171, 195, 283, 388
BseLI CCNNNNNNNGG 1 cut(s) 177
BseMI GCAATG 1 cut(s) 62
BseMII CTCAG 1 cut(s) 444
BseRI GAGGAG 1 cut(s) 24
BseSI GKGCMC 1 cut(s) 378
BseXI GCAGC 2 cut(s) 40, 62
Bsh1236I CGCG 2 cut(s) 7, 285
Bsh1285I CGRYCG 1 cut(s) 500
BshNI GGYRCC 1 cut(s) 373
BshVI ATCGAT 1 cut(s) 496
BsiEI CGRYCG 1 cut(s) 500
BsiHKCI CYCGRG 1 cut(s) 263
BslI CCNNNNNNNGG 1 cut(s) 177
BsmI GAATGC 1 cut(s) 196
BsoBI CYCGRG 1 cut(s) 263
Bsp1286I GDGCHC 2 cut(s) 264, 378
Bsp143I GATC 2 cut(s) 493, 497
Bsp19I CCATGG 2 cut(s) 171, 195
BspACI CCGC 2 cut(s) 283, 285
BspCNI CTCAG 1 cut(s) 445
BspDI ATCGAT 1 cut(s) 496
BspFNI CGCG 2 cut(s) 7, 285
BspLI GGNNCC 3 cut(s) 169, 261, 375
BspT107I GGYRCC 1 cut(s) 373
BspTI CTTAAG 2 cut(s) 323, 458
BsrDI GCAATG 1 cut(s) 62
BssECI CCNNGG 4 cut(s) 171, 195, 283, 388
BssMI GATC 2 cut(s) 493, 497
BssT1I CCWWGG 3 cut(s) 171, 195, 388
Bst2UI CCWGG 1 cut(s) 407
BstAFI CTTAAG 2 cut(s) 323, 458
BstC8I GCNNGC 2 cut(s) 35, 484
BstDEI CTNAG 1 cut(s) 453
BstDSI CCRYGG 3 cut(s) 171, 195, 283
BstFNI CGCG 2 cut(s) 7, 285
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 2 cut(s) 496, 500
BstMBI GATC 2 cut(s) 493, 497
BstMCI CGRYCG 1 cut(s) 500
BstMWI GCNNNNNNNGC 3 cut(s) 282, 328, 363
BstNI CCWGG 1 cut(s) 407
BstNSI RCATGY 3 cut(s) 442, 486, 530
BstSCI CCNGG 1 cut(s) 405
BstSLI GKGCMC 1 cut(s) 378
BstUI CGCG 2 cut(s) 7, 285
BstV1I GCAGC 2 cut(s) 40, 62
Bsu15I ATCGAT 1 cut(s) 496
BsuTUI ATCGAT 1 cut(s) 496
BtgI CCRYGG 3 cut(s) 171, 195, 283
BtrI CACGTC 1 cut(s) 121
Cac8I GCNNGC 2 cut(s) 35, 484
CfoI GCGC 1 cut(s) 7
Cfr13I GGNCC 1 cut(s) 168
Cfr42I CCGCGG 1 cut(s) 286
ClaI ATCGAT 1 cut(s) 496
CviAII CATG 8 cut(s) 157, 172, 196, 428, 439, 483, 527, 541
DdeI CTNAG 1 cut(s) 453
DpnI GATC 2 cut(s) 495, 499
DpnII GATC 2 cut(s) 493, 497
Eco130I CCWWGG 3 cut(s) 171, 195, 388
Eco24I GRGCYC 1 cut(s) 264
Eco47I GGWCC 1 cut(s) 168
Eco57I CTGAAG 2 cut(s) 206, 321
Eco88I CYCGRG 1 cut(s) 263
EcoRII CCWGG 1 cut(s) 405
EcoT14I CCWWGG 3 cut(s) 171, 195, 388
EcoT38I GRGCYC 1 cut(s) 264
ErhI CCWWGG 3 cut(s) 171, 195, 388
FaeI CATG 8 cut(s) 160, 175, 199, 431, 442, 486, 530, 544
FatI CATG 8 cut(s) 156, 171, 195, 427, 438, 482, 526, 540
Fnu4HI GCNGC 2 cut(s) 51, 54
FriOI GRGCYC 1 cut(s) 264
Fsp4HI GCNGC 2 cut(s) 51, 54
GlaI GCGC 1 cut(s) 6
GluI GCNGC 2 cut(s) 51, 54
HhaI GCGC 1 cut(s) 7
Hin1II CATG 8 cut(s) 160, 175, 199, 431, 442, 486, 530, 544
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HindIII AAGCTT 1 cut(s) 303
HinfI GANTC 1 cut(s) 268
HphI GGTGA 2 cut(s) 34, 245
Hpy188I TCNGA 1 cut(s) 186
Hpy188III TCNNGA 2 cut(s) 95, 116
HpyAV CCTTC 1 cut(s) 235
HpyCH4IV ACGT 1 cut(s) 120
HpyCH4V TGCA 4 cut(s) 67, 276, 311, 486
HpyF10VI GCNNNNNNNGC 3 cut(s) 282, 328, 363
HpyF3I CTNAG 1 cut(s) 453
HpySE526I ACGT 1 cut(s) 120
Hsp92II CATG 8 cut(s) 160, 175, 199, 431, 442, 486, 530, 544
HspAI GCGC 1 cut(s) 5
KspI CCGCGG 1 cut(s) 286
Kzo9I GATC 2 cut(s) 493, 497
LmnI GCTCC 2 cut(s) 259, 328
LpnPI CCDG 7 cut(s) 101, 216, 360, 392, 419, 431, 519
Lsp1109I GCAGC 2 cut(s) 40, 62
LweI GCATC 1 cut(s) 500
MaeII ACGT 1 cut(s) 120
MaeIII GTNAC 3 cut(s) 22, 211, 441
MalI GATC 2 cut(s) 495, 499
MboI GATC 2 cut(s) 493, 497
MboII GAAGA 1 cut(s) 199
MhlI GDGCHC 2 cut(s) 264, 378
MluCI AATT 1 cut(s) 368
MnlI CCTC 3 cut(s) 123, 229, 355
MseI TTAA 3 cut(s) 324, 333, 459
MslI CAYNNNNRTG 2 cut(s) 437, 476
MspA1I CMGCKG 2 cut(s) 53, 285
MspCI CTTAAG 2 cut(s) 323, 458
MspR9I CCNGG 1 cut(s) 407
Mva1269I GAATGC 1 cut(s) 196
MvaI CCWGG 1 cut(s) 407
MvnI CGCG 2 cut(s) 7, 285
MwoI GCNNNNNNNGC 3 cut(s) 282, 328, 363
NcoI CCATGG 2 cut(s) 171, 195
NdeII GATC 2 cut(s) 493, 497
NlaIII CATG 8 cut(s) 160, 175, 199, 431, 442, 486, 530, 544
NlaIV GGNNCC 3 cut(s) 169, 261, 375
NmuCI GTSAC 2 cut(s) 22, 211
NspI RCATGY 3 cut(s) 442, 486, 530
PaeI GCATGC 1 cut(s) 486
PciI ACATGT 2 cut(s) 438, 526
PcsI WCGNNNNNNNCGW 1 cut(s) 261
PctI GAATGC 1 cut(s) 196
PfeI GAWTC 1 cut(s) 268
PkrI GCNGC 2 cut(s) 52, 55
Ple19I CGATCG 1 cut(s) 500
PscI ACATGT 2 cut(s) 438, 526
Psp6I CCWGG 1 cut(s) 405
PspGI CCWGG 1 cut(s) 405
PspN4I GGNNCC 3 cut(s) 169, 261, 375
PspPI GGNCC 1 cut(s) 168
PvuI CGATCG 1 cut(s) 500
PvuII CAGCTG 1 cut(s) 53
RseI CAYNNNNRTG 2 cut(s) 437, 476
SacII CCGCGG 1 cut(s) 286
SaqAI TTAA 3 cut(s) 324, 333, 459
SatI GCNGC 2 cut(s) 51, 54
Sau3AI GATC 2 cut(s) 493, 497
Sau96I GGNCC 1 cut(s) 168
ScrFI CCNGG 1 cut(s) 407
SduI GDGCHC 2 cut(s) 264, 378
SfaNI GCATC 1 cut(s) 500
Sfr303I CCGCGG 1 cut(s) 286
SgrBI CCGCGG 1 cut(s) 286
SinI GGWCC 1 cut(s) 168
SmiMI CAYNNNNRTG 2 cut(s) 437, 476
SmlI CTYRAG 3 cut(s) 201, 323, 458
SmoI CTYRAG 3 cut(s) 201, 323, 458
SphI GCATGC 1 cut(s) 486
Sse9I AATT 1 cut(s) 368
SsiI CCGC 2 cut(s) 283, 285
StyD4I CCNGG 1 cut(s) 405
StyI CCWWGG 3 cut(s) 171, 195, 388
TaiI ACGT 1 cut(s) 123
TaqI TCGA 1 cut(s) 496
TasI AATT 1 cut(s) 368
TfiI GAWTC 1 cut(s) 268
Tru1I TTAA 3 cut(s) 324, 333, 459
Tru9I TTAA 3 cut(s) 324, 333, 459
TseFI GTSAC 2 cut(s) 22, 211
TseI GCWGC 2 cut(s) 50, 53
Tsp45I GTSAC 2 cut(s) 22, 211
Vha464I CTTAAG 2 cut(s) 323, 458
VpaK11BI GGWCC 1 cut(s) 168
XceI RCATGY 3 cut(s) 442, 486, 530
XcmI CCANNNNNNNNNTGG 1 cut(s) 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.