RchiOBHm_Chr7g0191651

callose synthase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
10338667 .. 10340171
1505 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 267 bp
ATGTTTGGGGCTTATACCACAGCCGGAGGCATGGCTATCTCAAGACTTGTATTTAGATTTTTCTGGTTTGGCTTCAGCTCTGTTGCTGTGACATATATTTATCTGAAAGTTCTGCACGAAAGAAATGATTACTCAAATGATCATTCTATTTTCGGATATACAGTTTATGCAGCTTTACGCCTAGTCCTTGCGCTATTACTCAAATTTGCGGCATGTAGATTGAGGGCAAATCACCTCATGACCAAATCATTTACTATACCATGTTAA

Protein Analysis

88

Amino Acids

10.06

Weight (kDa)

9.76

Isoelectric Point (pI)

20.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030533)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0191651
rosa_samantha Rh7CG124500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 209
AcsI RAATTY 1 cut(s) 203
AcuI CTGAAG 1 cut(s) 58
AluBI AGCT 2 cut(s) 78, 173
AluI AGCT 2 cut(s) 78, 173
ApeKI GCWGC 1 cut(s) 170
ApoI RAATTY 1 cut(s) 203
AspLEI GCGC 1 cut(s) 193
AsuHPI GGTGA 1 cut(s) 224
BbvI GCAGC 1 cut(s) 182
BclI TGATCA 1 cut(s) 139
BfaI CTAG 1 cut(s) 182
BisI GCNGC 2 cut(s) 171, 210
BlsI GCNGC 2 cut(s) 172, 211
BpuEI CTTGAG 1 cut(s) 25
BseXI GCAGC 1 cut(s) 182
BsgI GTGCAG 1 cut(s) 98
BsiSI CCGG 1 cut(s) 24
Bsp143I GATC 1 cut(s) 139
BspACI CCGC 1 cut(s) 209
BspHI TCATGA 1 cut(s) 237
BssMI GATC 1 cut(s) 139
Bst4CI ACNGT 1 cut(s) 163
BstHHI GCGC 1 cut(s) 193
BstKTI GATC 1 cut(s) 142
BstMBI GATC 1 cut(s) 139
BstNSI RCATGY 1 cut(s) 216
BstV1I GCAGC 1 cut(s) 182
CciI TCATGA 1 cut(s) 237
CfoI GCGC 1 cut(s) 193
CviAII CATG 4 cut(s) 31, 213, 238, 261
CviJI RGCY 6 cut(s) 11, 23, 35, 72, 78, 173
CviKI_1 RGCY 6 cut(s) 11, 23, 35, 72, 78, 173
DpnI GATC 1 cut(s) 141
DpnII GATC 1 cut(s) 139
Eco57I CTGAAG 1 cut(s) 58
FaeI CATG 4 cut(s) 34, 216, 241, 264
FatI CATG 4 cut(s) 30, 212, 237, 260
FbaI TGATCA 1 cut(s) 139
Fnu4HI GCNGC 2 cut(s) 171, 210
Fsp4HI GCNGC 2 cut(s) 171, 210
FspBI CTAG 1 cut(s) 182
GlaI GCGC 1 cut(s) 192
GluI GCNGC 2 cut(s) 171, 210
HapII CCGG 1 cut(s) 24
HhaI GCGC 1 cut(s) 193
Hin1II CATG 4 cut(s) 34, 216, 241, 264
Hin6I GCGC 1 cut(s) 191
HinP1I GCGC 1 cut(s) 191
HpaII CCGG 1 cut(s) 24
HphI GGTGA 1 cut(s) 224
Hpy188I TCNGA 2 cut(s) 105, 155
Hpy188III TCNNGA 2 cut(s) 42, 238
HpyCH4III ACNGT 1 cut(s) 163
HpyCH4V TGCA 2 cut(s) 115, 170
Hsp92II CATG 4 cut(s) 34, 216, 241, 264
HspAI GCGC 1 cut(s) 191
Ksp22I TGATCA 1 cut(s) 139
Kzo9I GATC 1 cut(s) 139
LpnPI CCDG 2 cut(s) 37, 49
Lsp1109I GCAGC 1 cut(s) 182
MaeI CTAG 1 cut(s) 182
MaeIII GTNAC 1 cut(s) 88
MalI GATC 1 cut(s) 141
MboI GATC 1 cut(s) 139
MluCI AATT 1 cut(s) 203
MnlI CCTC 3 cut(s) 20, 216, 245
MseI TTAA 1 cut(s) 265
MspI CCGG 1 cut(s) 24
NdeII GATC 1 cut(s) 139
NlaIII CATG 4 cut(s) 34, 216, 241, 264
NmuCI GTSAC 1 cut(s) 88
NspI RCATGY 1 cut(s) 216
PagI TCATGA 1 cut(s) 237
PkrI GCNGC 2 cut(s) 172, 211
SaqAI TTAA 1 cut(s) 265
SatI GCNGC 2 cut(s) 171, 210
Sau3AI GATC 1 cut(s) 139
SetI ASST 3 cut(s) 80, 175, 237
SmlI CTYRAG 1 cut(s) 40
SmoI CTYRAG 1 cut(s) 40
Sse9I AATT 1 cut(s) 203
SsiI CCGC 1 cut(s) 209
SspMI CTAG 1 cut(s) 182
TaaI ACNGT 1 cut(s) 163
TasI AATT 1 cut(s) 203
TauI GCSGC 1 cut(s) 212
Tru1I TTAA 1 cut(s) 265
Tru9I TTAA 1 cut(s) 265
TseFI GTSAC 1 cut(s) 88
TseI GCWGC 1 cut(s) 170
Tsp45I GTSAC 1 cut(s) 88
XapI RAATTY 1 cut(s) 203
XceI RCATGY 1 cut(s) 216
XspI CTAG 1 cut(s) 182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.