RchiOBHm_Chr7g0192211

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
10760628 .. 10762003
1376 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 372 bp
ATGCAAGGGAATTTAAGAAGTTACTTAGGGGGGTTGTTGGGTGGTGATTGTGTTGAGGATTTTATTCCTCAACTTTCTTGGAGTAGTCACTTTAATGGGTTAGGAGCAAAAGTGGAGAAAATTTCAAAAGGATTGATCAATTTCTGGAAATTGTTGTTCGAGCACATGGGGTACTCTTTAGGTCTTGACGTTGTTGAAGGTCAGATAAATGATTTTGTGGACATCCTGCTTGAACACATAACACAGCTTGCTCTTCTATTGCTAAAAACAGCATTCCTGCTGTCATCTAGGGTATGGTTGCGGGTGGTACTGATACTACCTACACAATTCTGGAGTGGGCTAGGATTAACCCTTAAGGCACCCCCAGAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

123

Amino Acids

13.71

Weight (kDa)

5.86

Isoelectric Point (pI)

23.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030505)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0192211
rosa_laevigata RLG00000004386

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 358
AciI CCGC 1 cut(s) 301
AcsI RAATTY 2 cut(s) 10, 120
AfaI GTAC 2 cut(s) 173, 309
AflII CTTAAG 1 cut(s) 353
AgsI TTSAA 3 cut(s) 126, 197, 233
AluBI AGCT 1 cut(s) 247
AluI AGCT 1 cut(s) 247
Alw21I GWGCWC 1 cut(s) 165
ApoI RAATTY 2 cut(s) 10, 120
AsuHPI GGTGA 1 cut(s) 56
BanI GGYRCC 1 cut(s) 358
Bbv12I GWGCWC 1 cut(s) 165
BclI TGATCA 1 cut(s) 135
BfaI CTAG 2 cut(s) 288, 341
BfrI CTTAAG 1 cut(s) 353
BmiI GGNNCC 1 cut(s) 360
BpmI CTGGAG 1 cut(s) 352
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
BseGI GGATG 1 cut(s) 222
BshNI GGYRCC 1 cut(s) 358
BsiHKAI GWGCWC 1 cut(s) 165
BsmI GAATGC 1 cut(s) 272
Bsp1286I GDGCHC 1 cut(s) 165
Bsp143I GATC 1 cut(s) 135
BspACI CCGC 1 cut(s) 301
BspLI GGNNCC 1 cut(s) 360
BspQI GCTCTTC 1 cut(s) 258
BspT107I GGYRCC 1 cut(s) 358
BspTI CTTAAG 1 cut(s) 353
BssMI GATC 1 cut(s) 135
Bst6I CTCTTC 1 cut(s) 258
BstAFI CTTAAG 1 cut(s) 353
BstC8I GCNNGC 1 cut(s) 249
BstDEI CTNAG 1 cut(s) 25
BstF5I GGATG 1 cut(s) 222
BstKTI GATC 1 cut(s) 138
BstMBI GATC 1 cut(s) 135
BtsCI GGATG 1 cut(s) 222
Cac8I GCNNGC 1 cut(s) 249
Csp6I GTAC 2 cut(s) 172, 308
CviAII CATG 1 cut(s) 166
CviJI RGCY 2 cut(s) 247, 340
CviKI_1 RGCY 2 cut(s) 247, 340
CviQI GTAC 2 cut(s) 172, 308
DdeI CTNAG 1 cut(s) 25
DpnI GATC 1 cut(s) 137
DpnII GATC 1 cut(s) 135
Eam1104I CTCTTC 1 cut(s) 258
EarI CTCTTC 1 cut(s) 258
FaeI CATG 1 cut(s) 169
FaiI YATR 3 cut(s) 167, 239, 295
FatI CATG 1 cut(s) 165
FauI CCCGC 1 cut(s) 294
FbaI TGATCA 1 cut(s) 135
FokI GGATG 1 cut(s) 209
FspBI CTAG 2 cut(s) 288, 341
GsuI CTGGAG 1 cut(s) 352
Hin1II CATG 1 cut(s) 169
HphI GGTGA 1 cut(s) 56
Hpy166II GTNNAC 1 cut(s) 220
Hpy188I TCNGA 1 cut(s) 204
Hpy188III TCNNGA 3 cut(s) 145, 185, 331
Hpy8I GTNNAC 1 cut(s) 220
HpyAV CCTTC 1 cut(s) 191
HpyCH4IV ACGT 1 cut(s) 189
HpyCH4V TGCA 1 cut(s) 4
HpyF3I CTNAG 1 cut(s) 25
HpySE526I ACGT 1 cut(s) 189
Hsp92II CATG 1 cut(s) 169
Ksp22I TGATCA 1 cut(s) 135
Kzo9I GATC 1 cut(s) 135
LguI GCTCTTC 1 cut(s) 258
LmnI GCTCC 1 cut(s) 104
LpnPI CCDG 4 cut(s) 130, 239, 290, 316
MaeI CTAG 2 cut(s) 288, 341
MaeII ACGT 1 cut(s) 189
MaeIII GTNAC 2 cut(s) 20, 86
MalI GATC 1 cut(s) 137
MboI GATC 1 cut(s) 135
MboII GAAGA 1 cut(s) 245
MhlI GDGCHC 1 cut(s) 165
MluCI AATT 5 cut(s) 10, 120, 139, 149, 326
MnlI CCTC 2 cut(s) 49, 78
MseI TTAA 4 cut(s) 14, 93, 347, 354
MslI CAYNNNNRTG 1 cut(s) 93
MspCI CTTAAG 1 cut(s) 353
Mva1269I GAATGC 1 cut(s) 272
NdeII GATC 1 cut(s) 135
NlaIII CATG 1 cut(s) 169
NlaIV GGNNCC 1 cut(s) 360
NmuCI GTSAC 1 cut(s) 86
PciSI GCTCTTC 1 cut(s) 258
PctI GAATGC 1 cut(s) 272
PspN4I GGNNCC 1 cut(s) 360
RsaI GTAC 2 cut(s) 173, 309
RsaNI GTAC 2 cut(s) 172, 308
RseI CAYNNNNRTG 1 cut(s) 93
SapI GCTCTTC 1 cut(s) 258
SaqAI TTAA 4 cut(s) 14, 93, 347, 354
Sau3AI GATC 1 cut(s) 135
SduI GDGCHC 1 cut(s) 165
SetI ASST 5 cut(s) 184, 192, 202, 249, 322
SmiMI CAYNNNNRTG 1 cut(s) 93
SmlI CTYRAG 1 cut(s) 353
SmoI CTYRAG 1 cut(s) 353
Sse9I AATT 5 cut(s) 10, 120, 139, 149, 326
SsiI CCGC 1 cut(s) 301
SspMI CTAG 2 cut(s) 288, 341
TaiI ACGT 1 cut(s) 192
TaqI TCGA 1 cut(s) 159
TasI AATT 5 cut(s) 10, 120, 139, 149, 326
Tru1I TTAA 4 cut(s) 14, 93, 347, 354
Tru9I TTAA 4 cut(s) 14, 93, 347, 354
TseFI GTSAC 1 cut(s) 86
Tsp45I GTSAC 1 cut(s) 86
Vha464I CTTAAG 1 cut(s) 353
XapI RAATTY 2 cut(s) 10, 120
XspI CTAG 2 cut(s) 288, 341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.