RLG00000004386

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
58918725 .. 58919595
871 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004386

Sequence Viewer

Length: 381 bp
ATGGTGCTTCCTTATGGCATCAGACCAATGGTCATGGTTTCATCTCCAGATGCTGCTCAGGAAACCATGAAAACAAATGATCTCATCTTCTCTATGAAGACAAAGATGTGTCTACAGCTCCTTGCGTTCGAGCACATGGGGTACTCTTTAAGTCTTGACGTTGTTGAAGGTCAGATAACTGATTTTGCGGACATCCTGCTTAAACATATAACACAGCTTGCTCTTCTATTGCTAAAAATAGCATTACTGCTATCATCTGGGGTATGGTTGCGGGTGTTACTGATACTACCTACACAATTCTGGAGTGGGCTAGGATTAACCCTTAAGGCACCCCAGAGTGATGAAATGTCGCTGCAAAATGGTGTTTTTTTCGATTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

127

Amino Acids

14.03

Weight (kDa)

5.13

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030505)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0192211
rosa_laevigata RLG00000004386

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 328
AccI GTMKAC 1 cut(s) 112
AciI CCGC 2 cut(s) 188, 271
AfaI GTAC 1 cut(s) 143
AflII CTTAAG 1 cut(s) 323
AgsI TTSAA 1 cut(s) 167
AhdI GACNNNNNGTC 1 cut(s) 29
AluBI AGCT 2 cut(s) 118, 217
AluI AGCT 2 cut(s) 118, 217
Alw21I GWGCWC 1 cut(s) 135
AlwNI CAGNNNCTG 1 cut(s) 53
ApeKI GCWGC 2 cut(s) 53, 352
BanI GGYRCC 1 cut(s) 328
BbsI GAAGAC 1 cut(s) 104
Bbv12I GWGCWC 1 cut(s) 135
BbvI GCAGC 2 cut(s) 40, 339
BfaI CTAG 1 cut(s) 311
BfmI CTRYAG 1 cut(s) 113
BfrI CTTAAG 1 cut(s) 323
BisI GCNGC 2 cut(s) 54, 353
BlsI GCNGC 2 cut(s) 55, 354
BmeRI GACNNNNNGTC 1 cut(s) 29
BmiI GGNNCC 1 cut(s) 330
BmsI GCATC 2 cut(s) 27, 40
BpiI GAAGAC 1 cut(s) 104
BpmI CTGGAG 2 cut(s) 30, 322
Bpu10I CCTNAGC 1 cut(s) 57
BseGI GGATG 1 cut(s) 192
BseMII CTCAG 1 cut(s) 71
BseXI GCAGC 2 cut(s) 40, 339
BshNI GGYRCC 1 cut(s) 328
BsiHKAI GWGCWC 1 cut(s) 135
Bsp1286I GDGCHC 1 cut(s) 135
Bsp143I GATC 1 cut(s) 79
BspACI CCGC 2 cut(s) 188, 271
BspCNI CTCAG 1 cut(s) 70
BspLI GGNNCC 1 cut(s) 330
BspQI GCTCTTC 1 cut(s) 228
BspT107I GGYRCC 1 cut(s) 328
BspTI CTTAAG 1 cut(s) 323
BssMI GATC 1 cut(s) 79
Bst6I CTCTTC 1 cut(s) 228
BstAFI CTTAAG 1 cut(s) 323
BstC8I GCNNGC 1 cut(s) 219
BstDEI CTNAG 1 cut(s) 57
BstF5I GGATG 1 cut(s) 192
BstKTI GATC 1 cut(s) 82
BstMBI GATC 1 cut(s) 79
BstSFI CTRYAG 1 cut(s) 113
BstV1I GCAGC 2 cut(s) 40, 339
BstV2I GAAGAC 1 cut(s) 104
BtsCI GGATG 1 cut(s) 192
Cac8I GCNNGC 1 cut(s) 219
CaiI CAGNNNCTG 1 cut(s) 53
Csp6I GTAC 1 cut(s) 142
CviAII CATG 3 cut(s) 34, 67, 136
CviJI RGCY 3 cut(s) 118, 217, 310
CviKI_1 RGCY 3 cut(s) 118, 217, 310
CviQI GTAC 1 cut(s) 142
DdeI CTNAG 1 cut(s) 57
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
DriI GACNNNNNGTC 1 cut(s) 29
Eam1104I CTCTTC 1 cut(s) 228
Eam1105I GACNNNNNGTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 228
FaeI CATG 3 cut(s) 37, 70, 139
FaiI YATR 8 cut(s) 15, 35, 68, 95, 137, 207, 209, 265
FatI CATG 3 cut(s) 33, 66, 135
FauI CCCGC 1 cut(s) 264
FblI GTMKAC 1 cut(s) 112
Fnu4HI GCNGC 2 cut(s) 54, 353
FokI GGATG 1 cut(s) 179
Fsp4HI GCNGC 2 cut(s) 54, 353
FspBI CTAG 1 cut(s) 311
GluI GCNGC 2 cut(s) 54, 353
GsuI CTGGAG 2 cut(s) 30, 322
Hin1II CATG 3 cut(s) 37, 70, 139
Hpy166II GTNNAC 1 cut(s) 113
Hpy188I TCNGA 2 cut(s) 23, 174
Hpy188III TCNNGA 4 cut(s) 47, 59, 155, 301
Hpy8I GTNNAC 1 cut(s) 113
HpyAV CCTTC 1 cut(s) 161
HpyCH4IV ACGT 1 cut(s) 159
HpyCH4V TGCA 1 cut(s) 355
HpyF3I CTNAG 1 cut(s) 57
HpySE526I ACGT 1 cut(s) 159
Hsp92II CATG 3 cut(s) 37, 70, 139
Kzo9I GATC 1 cut(s) 79
LguI GCTCTTC 1 cut(s) 228
LmnI GCTCC 1 cut(s) 123
LpnPI CCDG 6 cut(s) 44, 60, 209, 243, 286, 347
Lsp1109I GCAGC 2 cut(s) 40, 339
LweI GCATC 2 cut(s) 27, 40
MaeI CTAG 1 cut(s) 311
MaeII ACGT 1 cut(s) 159
MaeIII GTNAC 1 cut(s) 276
MalI GATC 1 cut(s) 81
MboI GATC 1 cut(s) 79
MboII GAAGA 3 cut(s) 79, 109, 215
MhlI GDGCHC 1 cut(s) 135
MluCI AATT 1 cut(s) 296
MseI TTAA 4 cut(s) 149, 201, 317, 324
MspCI CTTAAG 1 cut(s) 323
NdeII GATC 1 cut(s) 79
NlaIII CATG 3 cut(s) 37, 70, 139
NlaIV GGNNCC 1 cut(s) 330
PciSI GCTCTTC 1 cut(s) 228
PkrI GCNGC 2 cut(s) 55, 354
PspN4I GGNNCC 1 cut(s) 330
PstNI CAGNNNCTG 1 cut(s) 53
RsaI GTAC 1 cut(s) 143
RsaNI GTAC 1 cut(s) 142
SapI GCTCTTC 1 cut(s) 228
SaqAI TTAA 4 cut(s) 149, 201, 317, 324
SatI GCNGC 2 cut(s) 54, 353
Sau3AI GATC 1 cut(s) 79
SduI GDGCHC 1 cut(s) 135
SetI ASST 5 cut(s) 120, 162, 172, 219, 292
SfaNI GCATC 2 cut(s) 27, 40
SfcI CTRYAG 1 cut(s) 113
SmlI CTYRAG 1 cut(s) 323
SmoI CTYRAG 1 cut(s) 323
Sse9I AATT 1 cut(s) 296
SsiI CCGC 2 cut(s) 188, 271
SspMI CTAG 1 cut(s) 311
TaiI ACGT 1 cut(s) 162
TaqI TCGA 2 cut(s) 129, 372
TasI AATT 1 cut(s) 296
Tru1I TTAA 4 cut(s) 149, 201, 317, 324
Tru9I TTAA 4 cut(s) 149, 201, 317, 324
TseI GCWGC 2 cut(s) 53, 352
TspDTI ATGAA 4 cut(s) 30, 83, 110, 357
Vha464I CTTAAG 1 cut(s) 323
XmiI GTMKAC 1 cut(s) 112
XspI CTAG 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.