RchiOBHm_Chr7g0204951

tRNA (Guanine(26)-N(2))-dimethyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
22642177 .. 22643260
1084 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 180 bp
ATGGTGTTGCTGGATTTAGCCTTTACATCTAACTTTAAAAGAGTTACTGTTATTTTCCTTCTTGTAGTATCAGTTGAAGCTTGTAGGAGAAACATCAAGTTCAATGGTTCAGTTGCATGTTCAAAGGTGGAATCACATCTTGTTGATGCTCGTGTGCCTCACCAACCAAAAAGAGTGTGA

Protein Analysis

59

Amino Acids

6.64

Weight (kDa)

10.05

Isoelectric Point (pI)

50.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030521)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0204951
rosa_roxburghii Rroxscaffold_4G00302280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 3 cut(s) 77, 103, 123
AluBI AGCT 1 cut(s) 80
AluI AGCT 1 cut(s) 80
AsuHPI GGTGA 1 cut(s) 152
BauI CACGAG 1 cut(s) 150
BmsI GCATC 1 cut(s) 136
BssSI CACGAG 1 cut(s) 150
Bst2BI CACGAG 1 cut(s) 150
Bst4CI ACNGT 1 cut(s) 49
BstNSI RCATGY 1 cut(s) 120
CviAII CATG 1 cut(s) 117
CviJI RGCY 2 cut(s) 20, 80
CviKI_1 RGCY 2 cut(s) 20, 80
DraI TTTAAA 1 cut(s) 37
FaeI CATG 1 cut(s) 120
FaiI YATR 1 cut(s) 118
FatI CATG 1 cut(s) 116
FspEI CC 8 cut(s) 34, 70, 71, 90, 110, 113, 171, 176
Hin1II CATG 1 cut(s) 120
HindIII AAGCTT 1 cut(s) 78
HinfI GANTC 1 cut(s) 131
HphI GGTGA 1 cut(s) 152
HpyAV CCTTC 1 cut(s) 68
HpyCH4III ACNGT 1 cut(s) 49
HpyCH4V TGCA 1 cut(s) 116
Hsp92II CATG 1 cut(s) 120
LweI GCATC 1 cut(s) 136
MaeIII GTNAC 1 cut(s) 43
MnlI CCTC 1 cut(s) 168
MseI TTAA 1 cut(s) 36
NlaIII CATG 1 cut(s) 120
NspI RCATGY 1 cut(s) 120
PfeI GAWTC 1 cut(s) 131
SaqAI TTAA 1 cut(s) 36
SetI ASST 2 cut(s) 82, 129
SfaNI GCATC 1 cut(s) 136
SgeI CNNG 8 cut(s) 23, 74, 93, 109, 129, 152, 162, 164
TaaI ACNGT 1 cut(s) 49
TfiI GAWTC 1 cut(s) 131
Tru1I TTAA 1 cut(s) 36
Tru9I TTAA 1 cut(s) 36
XceI RCATGY 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.