RchiOBHm_Chr7g0212411

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
29699283 .. 29699642
360 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 360 bp
ATGACAAATATATTATTCTATGGATGCAAAGATGTTGTGTTATCTGCTTATGGAGAGTACTGGGGACGAGTTCGGAAACTATACGTTGTTGAACTTCTAAGCCTTAAAAGAGTGCAAAAACTTCAGTTTGCAAGGGAGAAAGAAGTTGCAGAAATAGGCAATAGGATACGCAAAGCCTGCCTCGGTAACTCTTCGATTAATCTAAGTGACATGCTGATCACAACCTCCAACAACATACTGTCTAGGTGTGTTATAGGGAAAAGGTTTGTAGAGGAAAATGATAATTGGTTTGGGGAGGCATCAAGAAGACTGTTGATTCAACTCACGACTTTCAGTTTTGGAGATTTCTTCCTTGTTTGA

Protein Analysis

119

Amino Acids

13.74

Weight (kDa)

9.33

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030463)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0212411
rosa_laevigata RLG00000002891

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 107
AfaI GTAC 1 cut(s) 59
AgsI TTSAA 2 cut(s) 92, 320
AseI ATTAAT 1 cut(s) 198
BbsI GAAGAC 1 cut(s) 313
BciVI GTATCC 1 cut(s) 159
BclI TGATCA 1 cut(s) 216
BfaI CTAG 1 cut(s) 243
BfuI GTATCC 1 cut(s) 159
BmcAI AGTACT 1 cut(s) 59
BmrI ACTGGG 1 cut(s) 70
BmsI GCATC 2 cut(s) 14, 308
BmuI ACTGGG 1 cut(s) 70
BpiI GAAGAC 1 cut(s) 313
BsaJI CCNNGG 1 cut(s) 181
Bse1I ACTGG 1 cut(s) 65
BseDI CCNNGG 1 cut(s) 181
BseGI GGATG 1 cut(s) 29
BseNI ACTGG 1 cut(s) 65
BslFI GGGAC 1 cut(s) 78
BsmFI GGGAC 1 cut(s) 78
Bsp143I GATC 1 cut(s) 216
BsrI ACTGG 1 cut(s) 65
BssECI CCNNGG 1 cut(s) 181
BssMI GATC 1 cut(s) 216
Bst4CI ACNGT 2 cut(s) 240, 312
Bst6I CTCTTC 1 cut(s) 196
BstAPI GCANNNNNTGC 1 cut(s) 177
BstC8I GCNNGC 1 cut(s) 178
BstDEI CTNAG 2 cut(s) 98, 203
BstF5I GGATG 1 cut(s) 29
BstKTI GATC 1 cut(s) 219
BstMBI GATC 1 cut(s) 216
BstMWI GCNNNNNNNGC 1 cut(s) 177
BstNSI RCATGY 1 cut(s) 214
BstV2I GAAGAC 1 cut(s) 313
BsuI GTATCC 1 cut(s) 159
BtsCI GGATG 1 cut(s) 29
Cac8I GCNNGC 1 cut(s) 178
Csp6I GTAC 1 cut(s) 58
CviAII CATG 1 cut(s) 211
CviJI RGCY 2 cut(s) 102, 176
CviKI_1 RGCY 2 cut(s) 102, 176
CviQI GTAC 1 cut(s) 58
DdeI CTNAG 2 cut(s) 98, 203
DpnI GATC 1 cut(s) 218
DpnII GATC 1 cut(s) 216
Eam1104I CTCTTC 1 cut(s) 196
EarI CTCTTC 1 cut(s) 196
Eco57I CTGAAG 1 cut(s) 107
FaeI CATG 1 cut(s) 214
FaiI YATR 7 cut(s) 11, 21, 51, 82, 212, 236, 254
FaqI GGGAC 1 cut(s) 78
FatI CATG 1 cut(s) 210
FbaI TGATCA 1 cut(s) 216
FokI GGATG 1 cut(s) 36
FspBI CTAG 1 cut(s) 243
Hin1II CATG 1 cut(s) 214
HinfI GANTC 1 cut(s) 316
Hpy188I TCNGA 1 cut(s) 75
Hpy188III TCNNGA 2 cut(s) 303, 325
HpyCH4III ACNGT 2 cut(s) 240, 312
HpyCH4IV ACGT 1 cut(s) 84
HpyCH4V TGCA 4 cut(s) 27, 115, 131, 149
HpyF10VI GCNNNNNNNGC 1 cut(s) 177
HpyF3I CTNAG 2 cut(s) 98, 203
HpySE526I ACGT 1 cut(s) 84
Hsp92II CATG 1 cut(s) 214
Ksp22I TGATCA 1 cut(s) 216
Kzo9I GATC 1 cut(s) 216
LpnPI CCDG 2 cut(s) 46, 190
LweI GCATC 2 cut(s) 14, 308
MaeI CTAG 1 cut(s) 243
MaeII ACGT 1 cut(s) 84
MaeIII GTNAC 2 cut(s) 185, 206
MalI GATC 1 cut(s) 218
MboI GATC 1 cut(s) 216
MboII GAAGA 3 cut(s) 183, 318, 340
MluCI AATT 1 cut(s) 283
MmeI TCCRAC 1 cut(s) 252
MnlI CCTC 4 cut(s) 191, 235, 265, 289
MseI TTAA 2 cut(s) 105, 198
MwoI GCNNNNNNNGC 1 cut(s) 177
NdeII GATC 1 cut(s) 216
NlaIII CATG 1 cut(s) 214
NmuCI GTSAC 1 cut(s) 206
NspI RCATGY 1 cut(s) 214
PfeI GAWTC 1 cut(s) 316
PshBI ATTAAT 1 cut(s) 198
RsaI GTAC 1 cut(s) 59
RsaNI GTAC 1 cut(s) 58
SaqAI TTAA 2 cut(s) 105, 198
Sau3AI GATC 1 cut(s) 216
ScaI AGTACT 1 cut(s) 59
SetI ASST 4 cut(s) 87, 227, 248, 266
SfaNI GCATC 2 cut(s) 14, 308
SgeI CNNG 9 cut(s) 73, 80, 144, 189, 194, 223, 255, 315, 337
Sse9I AATT 1 cut(s) 283
SspMI CTAG 1 cut(s) 243
TaaI ACNGT 2 cut(s) 240, 312
TaiI ACGT 1 cut(s) 87
TaqI TCGA 1 cut(s) 194
TasI AATT 1 cut(s) 283
TatI WGTACW 1 cut(s) 57
TfiI GAWTC 1 cut(s) 316
Tru1I TTAA 2 cut(s) 105, 198
Tru9I TTAA 2 cut(s) 105, 198
TseFI GTSAC 1 cut(s) 206
Tsp45I GTSAC 1 cut(s) 206
VspI ATTAAT 1 cut(s) 198
XceI RCATGY 1 cut(s) 214
XspI CTAG 1 cut(s) 243
ZrmI AGTACT 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.