RchiOBHm_Chr6g0251331

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser Thr consensus motif in nascent polypeptide chains

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
6602001 .. 6602549
549 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 213 bp
ATGGTGAAGCCTTCGTCATCGTCATCCTTTACGAGCCAGGACGCCCTTGTCCTTTTCAATTCTCTGAGATCGGCTTACTCCGCCACTCCTACCGCTCTCAAGATCATTGATCTCTATGTTGGTTTCGCTGTATCCACAGCTATCATCCAGGTAATGCATCGTCTCCATTTTCCTGTTGTCAATTCGATTCCATCCAATTCAGGTAATTGTTAA

Protein Analysis

70

Amino Acids

7.49

Weight (kDa)

9.1

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0025081)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0251331
rosa_roxburghii Rroxscaffold_7G00216750
rosa_samantha Rh6DG008500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 47
AccBSI CCGCTC 1 cut(s) 95
AciI CCGC 2 cut(s) 81, 93
AcyI GRCGYC 1 cut(s) 42
AgsI TTSAA 1 cut(s) 58
AjnI CCWGG 2 cut(s) 36, 147
AluBI AGCT 1 cut(s) 140
AluI AGCT 1 cut(s) 140
Alw26I GTCTC 1 cut(s) 167
AsuHPI GGTGA 1 cut(s) 16
BccI CCATC 1 cut(s) 199
BciT130I CCWGG 2 cut(s) 38, 149
BciVI GTATCC 1 cut(s) 142
BcoDI GTCTC 1 cut(s) 167
BfuI GTATCC 1 cut(s) 142
Bme1390I CCNGG 2 cut(s) 38, 149
BmrFI CCNGG 2 cut(s) 38, 149
BmsI GCATC 1 cut(s) 166
BpuEI CTTGAG 1 cut(s) 83
BsaHI GRCGYC 1 cut(s) 42
BseBI CCWGG 2 cut(s) 38, 149
BseGI GGATG 3 cut(s) 23, 144, 191
BseMII CTCAG 1 cut(s) 56
BsmAI GTCTC 1 cut(s) 167
BsmBI CGTCTC 1 cut(s) 167
Bsp143I GATC 3 cut(s) 68, 102, 109
BspACI CCGC 2 cut(s) 81, 93
BspCNI CTCAG 1 cut(s) 57
BsrBI CCGCTC 1 cut(s) 95
BssMI GATC 3 cut(s) 68, 102, 109
BssNI GRCGYC 1 cut(s) 42
Bst2UI CCWGG 2 cut(s) 38, 149
BstACI GRCGYC 1 cut(s) 42
BstDEI CTNAG 1 cut(s) 65
BstF5I GGATG 3 cut(s) 23, 144, 191
BstKTI GATC 3 cut(s) 71, 105, 112
BstMAI GTCTC 1 cut(s) 167
BstMBI GATC 3 cut(s) 68, 102, 109
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNI CCWGG 2 cut(s) 38, 149
BstSCI CCNGG 2 cut(s) 36, 147
BsuI GTATCC 1 cut(s) 142
BtsCI GGATG 3 cut(s) 23, 144, 191
CseI GACGC 1 cut(s) 50
CviJI RGCY 4 cut(s) 10, 36, 74, 140
CviKI_1 RGCY 4 cut(s) 10, 36, 74, 140
DdeI CTNAG 1 cut(s) 65
DpnI GATC 3 cut(s) 70, 104, 111
DpnII GATC 3 cut(s) 68, 102, 109
DrdI GACNNNNNNGTC 1 cut(s) 47
DseDI GACNNNNNNGTC 1 cut(s) 47
EciI GGCGGA 1 cut(s) 70
EcoRII CCWGG 2 cut(s) 36, 147
EcoT22I ATGCAT 1 cut(s) 159
Esp3I CGTCTC 1 cut(s) 167
FaiI YATR 1 cut(s) 117
FokI GGATG 3 cut(s) 10, 131, 178
HgaI GACGC 1 cut(s) 50
Hin1I GRCGYC 1 cut(s) 42
HinfI GANTC 1 cut(s) 187
HphI GGTGA 1 cut(s) 16
Hpy188I TCNGA 1 cut(s) 66
Hpy188III TCNNGA 1 cut(s) 100
HpyAV CCTTC 1 cut(s) 21
HpyCH4V TGCA 1 cut(s) 157
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 1 cut(s) 65
Hsp92I GRCGYC 1 cut(s) 42
Kzo9I GATC 3 cut(s) 68, 102, 109
LpnPI CCDG 6 cut(s) 23, 50, 134, 161, 186, 186
LweI GCATC 1 cut(s) 166
MalI GATC 3 cut(s) 70, 104, 111
MbiI CCGCTC 1 cut(s) 95
MboI GATC 3 cut(s) 68, 102, 109
MluCI AATT 4 cut(s) 58, 181, 196, 205
Mph1103I ATGCAT 1 cut(s) 159
MseI TTAA 1 cut(s) 211
MspR9I CCNGG 2 cut(s) 38, 149
MvaI CCWGG 2 cut(s) 38, 149
MwoI GCNNNNNNNGC 1 cut(s) 80
NdeII GATC 3 cut(s) 68, 102, 109
NsiI ATGCAT 1 cut(s) 159
PfeI GAWTC 1 cut(s) 187
Psp6I CCWGG 2 cut(s) 36, 147
PspGI CCWGG 2 cut(s) 36, 147
SaqAI TTAA 1 cut(s) 211
Sau3AI GATC 3 cut(s) 68, 102, 109
ScrFI CCNGG 2 cut(s) 38, 149
SetI ASST 3 cut(s) 142, 153, 205
SfaNI GCATC 1 cut(s) 166
SgeI CNNG 8 cut(s) 45, 49, 50, 59, 112, 160, 161, 185
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
Sse9I AATT 4 cut(s) 58, 181, 196, 205
SsiI CCGC 2 cut(s) 81, 93
StyD4I CCNGG 2 cut(s) 36, 147
TaqI TCGA 1 cut(s) 185
TasI AATT 4 cut(s) 58, 181, 196, 205
TfiI GAWTC 1 cut(s) 187
Tru1I TTAA 1 cut(s) 211
Tru9I TTAA 1 cut(s) 211
Zsp2I ATGCAT 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.