RchiOBHm_Chr6g0264581

Bet1-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
19797617 .. 19798891
1275 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 159 bp
ATGACTCACAGAAGGGTTAACCCAGATGAAATCCAATTGAGGATTGATCCAATCCACGCTGATGTTGATGAGGAGATCACCGATCTTCGATCCCAAGTTAGAAGCTTGAGAAACTGCTGCCCTGCCCAAATAACAATGGAGTTCACATCTATACTCTGA

Protein Analysis

52

Amino Acids

6.08

Weight (kDa)

5.07

Isoelectric Point (pI)

72.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030412)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0264581
rosa_samantha Rh7AG338000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 41, 84
AluBI AGCT 1 cut(s) 105
AluI AGCT 1 cut(s) 105
AlwI GGATC 2 cut(s) 41, 84
ApeKI GCWGC 1 cut(s) 117
AsuHPI GGTGA 1 cut(s) 70
BbvI GCAGC 1 cut(s) 104
BisI GCNGC 1 cut(s) 118
BlsI GCNGC 1 cut(s) 119
BpuEI CTTGAG 1 cut(s) 127
BseRI GAGGAG 1 cut(s) 86
BseXI GCAGC 1 cut(s) 104
Bsp143I GATC 4 cut(s) 46, 75, 82, 89
BspPI GGATC 2 cut(s) 41, 84
BssMI GATC 4 cut(s) 46, 75, 82, 89
BstKTI GATC 4 cut(s) 49, 78, 85, 92
BstMBI GATC 4 cut(s) 46, 75, 82, 89
BstV1I GCAGC 1 cut(s) 104
CviJI RGCY 1 cut(s) 105
CviKI_1 RGCY 1 cut(s) 105
DpnI GATC 4 cut(s) 48, 77, 84, 91
DpnII GATC 4 cut(s) 46, 75, 82, 89
FaiI YATR 1 cut(s) 152
Fnu4HI GCNGC 1 cut(s) 118
Fsp4HI GCNGC 1 cut(s) 118
GluI GCNGC 1 cut(s) 118
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HindIII AAGCTT 1 cut(s) 103
HinfI GANTC 1 cut(s) 4
HpaI GTTAAC 1 cut(s) 19
HphI GGTGA 1 cut(s) 70
Hpy166II GTNNAC 2 cut(s) 19, 144
Hpy188I TCNGA 1 cut(s) 158
Hpy8I GTNNAC 2 cut(s) 19, 144
HpyAV CCTTC 1 cut(s) 6
KspAI GTTAAC 1 cut(s) 19
Kzo9I GATC 4 cut(s) 46, 75, 82, 89
LpnPI CCDG 2 cut(s) 36, 135
Lsp1109I GCAGC 1 cut(s) 104
MalI GATC 4 cut(s) 48, 77, 84, 91
MboI GATC 4 cut(s) 46, 75, 82, 89
MboII GAAGA 1 cut(s) 77
MfeI CAATTG 1 cut(s) 35
MluCI AATT 1 cut(s) 35
MnlI CCTC 2 cut(s) 33, 64
MseI TTAA 1 cut(s) 18
MslI CAYNNNNRTG 1 cut(s) 60
MunI CAATTG 1 cut(s) 35
NdeII GATC 4 cut(s) 46, 75, 82, 89
PkrI GCNGC 1 cut(s) 119
RseI CAYNNNNRTG 1 cut(s) 60
SaqAI TTAA 1 cut(s) 18
SatI GCNGC 1 cut(s) 118
Sau3AI GATC 4 cut(s) 46, 75, 82, 89
SetI ASST 1 cut(s) 107
SgeI CNNG 5 cut(s) 35, 68, 107, 118, 134
SmiMI CAYNNNNRTG 1 cut(s) 60
SmlI CTYRAG 1 cut(s) 106
SmoI CTYRAG 1 cut(s) 106
Sse9I AATT 1 cut(s) 35
TaqI TCGA 1 cut(s) 88
TasI AATT 1 cut(s) 35
Tru1I TTAA 1 cut(s) 18
Tru9I TTAA 1 cut(s) 18
TseI GCWGC 1 cut(s) 117
TspDTI ATGAA 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.