RchiOBHm_Chr6g0266531

hydroxyacylglutathione hydrolase 2

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
23066816 .. 23070782
3967 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 396 bp
ATGAAGTATGCAATTGGAGGTGGCTCTAGTACTTTCAGCACCAACTTCACTGTTCCCTTGTTTATTCGGTTACTGTCCAGTTCGGAGCCATCACTTACTGAAAGTTCTAGGTACAGTTCTGTGCAGATCTTCTTTTCTGAAGTTTTCTTAGGTCACATCAGCTTTTACTTTCCTGGATCAGGGTCAATATTTGCAAGAGACACTTTGTTCAGCCTATCATGTCGCAAGTTGTTTGAAGGAACACCTGACCAGATGCAGTCTTCCCTTACAAAGATTATGTCTTTACCAGCTGATATAGAAGTATACTTTGGTCATGAATATACATTGGTTAGTCATGTCACCTTTTCAGTTTTCTGCAAGCTATATAATGTTTTAAAGTTCAGAACAGGGAACTGA

Protein Analysis

131

Amino Acids

14.68

Weight (kDa)

7.8

Isoelectric Point (pI)

46.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030346)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0255691 RchiOBHm_Chr6g0266531

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 303
AclWI GGATC 1 cut(s) 184
AcuI CTGAAG 1 cut(s) 159
AfaI GTAC 2 cut(s) 31, 113
AfiI CCNNNNNNNGG 1 cut(s) 179
AgsI TTSAA 1 cut(s) 236
AjnI CCWGG 1 cut(s) 172
AjuI GAANNNNNNNTTGG 2 cut(s) 291, 323
AluBI AGCT 3 cut(s) 162, 290, 361
AluI AGCT 3 cut(s) 162, 290, 361
Alw26I GTCTC 1 cut(s) 192
AlwI GGATC 1 cut(s) 184
ArsI GACNNNNNNTTYG 2 cut(s) 263, 295
AsuHPI GGTGA 1 cut(s) 331
BbsI GAAGAC 1 cut(s) 252
BccI CCATC 1 cut(s) 97
BciT130I CCWGG 1 cut(s) 174
BcoDI GTCTC 1 cut(s) 192
BfaI CTAG 2 cut(s) 27, 108
BglII AGATCT 1 cut(s) 126
BmcAI AGTACT 1 cut(s) 31
Bme1390I CCNGG 1 cut(s) 174
BmiI GGNNCC 1 cut(s) 87
BmrFI CCNGG 1 cut(s) 174
BmsI GCATC 1 cut(s) 243
BpiI GAAGAC 1 cut(s) 252
Bsc4I CCNNNNNNNGG 1 cut(s) 179
Bse1I ACTGG 1 cut(s) 78
BseBI CCWGG 1 cut(s) 174
BseLI CCNNNNNNNGG 1 cut(s) 179
BseNI ACTGG 1 cut(s) 78
BsgI GTGCAG 1 cut(s) 143
BslI CCNNNNNNNGG 1 cut(s) 179
BsmAI GTCTC 1 cut(s) 192
Bsp143I GATC 2 cut(s) 126, 176
BspHI TCATGA 1 cut(s) 313
BspLI GGNNCC 1 cut(s) 87
BspPI GGATC 1 cut(s) 184
BsrI ACTGG 1 cut(s) 78
BssMI GATC 2 cut(s) 126, 176
BssNAI GTATAC 1 cut(s) 304
Bst1107I GTATAC 1 cut(s) 304
Bst2UI CCWGG 1 cut(s) 174
Bst4CI ACNGT 3 cut(s) 52, 75, 116
BstC8I GCNNGC 1 cut(s) 359
BstDEI CTNAG 1 cut(s) 148
BstENI CCTNNNNNAGG 1 cut(s) 177
BstKTI GATC 2 cut(s) 129, 179
BstMAI GTCTC 1 cut(s) 192
BstMBI GATC 2 cut(s) 126, 176
BstNI CCWGG 1 cut(s) 174
BstSCI CCNGG 1 cut(s) 172
BstV2I GAAGAC 1 cut(s) 252
BstX2I RGATCY 1 cut(s) 126
BstYI RGATCY 1 cut(s) 126
BstZ17I GTATAC 1 cut(s) 304
BtsIMutI CAGTG 1 cut(s) 48
Cac8I GCNNGC 1 cut(s) 359
CciI TCATGA 1 cut(s) 313
Csp6I GTAC 2 cut(s) 30, 112
CviAII CATG 3 cut(s) 219, 314, 335
CviJI RGCY 6 cut(s) 24, 88, 162, 213, 290, 361
CviKI_1 RGCY 6 cut(s) 24, 88, 162, 213, 290, 361
CviQI GTAC 2 cut(s) 30, 112
DdeI CTNAG 1 cut(s) 148
DpnI GATC 2 cut(s) 128, 178
DpnII GATC 2 cut(s) 126, 176
DraI TTTAAA 1 cut(s) 375
Eco57I CTGAAG 1 cut(s) 159
EcoNI CCTNNNNNAGG 1 cut(s) 177
EcoRII CCWGG 1 cut(s) 172
FaeI CATG 3 cut(s) 222, 317, 338
FalI AAGNNNNNCTT 2 cut(s) 187, 219
FatI CATG 3 cut(s) 218, 313, 334
FblI GTMKAC 1 cut(s) 303
FspBI CTAG 2 cut(s) 27, 108
Hin1II CATG 3 cut(s) 222, 317, 338
HphI GGTGA 1 cut(s) 331
Hpy166II GTNNAC 1 cut(s) 304
Hpy188I TCNGA 3 cut(s) 85, 139, 383
Hpy188III TCNNGA 1 cut(s) 314
Hpy8I GTNNAC 1 cut(s) 304
HpyAV CCTTC 1 cut(s) 230
HpyCH4III ACNGT 3 cut(s) 52, 75, 116
HpyCH4V TGCA 5 cut(s) 11, 124, 194, 256, 357
HpyF3I CTNAG 1 cut(s) 148
Hsp92II CATG 3 cut(s) 222, 317, 338
Kzo9I GATC 2 cut(s) 126, 176
LmnI GCTCC 1 cut(s) 85
LpnPI CCDG 8 cut(s) 91, 159, 165, 186, 258, 263, 300, 372
LweI GCATC 1 cut(s) 243
MaeI CTAG 2 cut(s) 27, 108
MaeIII GTNAC 3 cut(s) 69, 152, 337
MalI GATC 2 cut(s) 128, 178
MboI GATC 2 cut(s) 126, 176
MboII GAAGA 2 cut(s) 121, 252
MfeI CAATTG 1 cut(s) 12
MflI RGATCY 1 cut(s) 126
MluCI AATT 1 cut(s) 12
MnlI CCTC 1 cut(s) 11
MseI TTAA 1 cut(s) 374
MspA1I CMGCKG 1 cut(s) 290
MspR9I CCNGG 1 cut(s) 174
MunI CAATTG 1 cut(s) 12
MvaI CCWGG 1 cut(s) 174
NdeII GATC 2 cut(s) 126, 176
NlaIII CATG 3 cut(s) 222, 317, 338
NlaIV GGNNCC 1 cut(s) 87
NmuCI GTSAC 2 cut(s) 152, 337
PagI TCATGA 1 cut(s) 313
PfoI TCCNGGA 1 cut(s) 172
Psp6I CCWGG 1 cut(s) 172
PspGI CCWGG 1 cut(s) 172
PspN4I GGNNCC 1 cut(s) 87
PsuI RGATCY 1 cut(s) 126
PvuII CAGCTG 1 cut(s) 290
RsaI GTAC 2 cut(s) 31, 113
RsaNI GTAC 2 cut(s) 30, 112
SaqAI TTAA 1 cut(s) 374
Sau3AI GATC 2 cut(s) 126, 176
ScaI AGTACT 1 cut(s) 31
ScrFI CCNGG 1 cut(s) 174
SetI ASST 8 cut(s) 22, 113, 154, 164, 247, 292, 344, 363
SfaNI GCATC 1 cut(s) 243
Sse9I AATT 1 cut(s) 12
SspI AATATT 1 cut(s) 189
SspMI CTAG 2 cut(s) 27, 108
StyD4I CCNGG 1 cut(s) 172
TaaI ACNGT 3 cut(s) 52, 75, 116
TasI AATT 1 cut(s) 12
TatI WGTACW 1 cut(s) 29
Tru1I TTAA 1 cut(s) 374
Tru9I TTAA 1 cut(s) 374
TscAI CASTG 1 cut(s) 55
TseFI GTSAC 2 cut(s) 152, 337
Tsp45I GTSAC 2 cut(s) 152, 337
TspDTI ATGAA 2 cut(s) 17, 330
TspRI CASTG 1 cut(s) 55
XagI CCTNNNNNAGG 1 cut(s) 177
XmiI GTMKAC 1 cut(s) 303
XspI CTAG 2 cut(s) 27, 108
ZrmI AGTACT 1 cut(s) 31
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.