RchiOBHm_Chr6g0255691

hydroxyacylglutathione hydrolase 2

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
11066115 .. 11071469
5355 bp
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UTR
Exon/CDS
Intron
PRQ22931

Sequence Viewer

Length: 306 bp
ATGACGGAGACAAATGGATGTTTGCAGGCCATGAGGTCCATGTTATGGGGATGTATGCCTGGTTATACCAAAGGTCACATCAACTTTTACTTTCCTGGATCAGGGTCAATATTTATAGGAGACACTTTGTTCAGCCTATCATGTGGCAAGTTGTTTGAAGGAACACCCGACCAGATGCAGTCGTCCCTTACAAAGATCATGTCTTTACCAGCTGATACAGAAGTATACTTTGGTCATGAATATACATTGAGTAGCTCTAAGTTTGCCTTATTTATTGAACCTAAGAACGAGGCACTTCAGTCCTAA

Protein Analysis

101

Amino Acids

11.17

Weight (kDa)

5.14

Isoelectric Point (pI)

58.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030346)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0255691 RchiOBHm_Chr6g0266531

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 45
AccI GTMKAC 1 cut(s) 225
AclWI GGATC 1 cut(s) 106
AcuI CTGAAG 1 cut(s) 281
AfiI CCNNNNNNNGG 2 cut(s) 45, 101
AgsI TTSAA 2 cut(s) 158, 278
AjnI CCWGG 2 cut(s) 58, 94
AjuI GAANNNNNNNTTGG 2 cut(s) 213, 245
AluBI AGCT 2 cut(s) 212, 255
AluI AGCT 2 cut(s) 212, 255
Alw26I GTCTC 2 cut(s) 2, 114
AlwI GGATC 1 cut(s) 106
AoxI GGCC 1 cut(s) 27
ArsI GACNNNNNNTTYG 2 cut(s) 185, 217
AspS9I GGNCC 1 cut(s) 36
AvaII GGWCC 1 cut(s) 36
BaeI ACNNNNGTAYC 2 cut(s) 207, 240
BciT130I CCWGG 2 cut(s) 60, 96
BcoDI GTCTC 2 cut(s) 2, 114
Bme1390I CCNGG 2 cut(s) 60, 96
Bme18I GGWCC 1 cut(s) 36
BmgT120I GGNCC 1 cut(s) 36
BmrFI CCNGG 2 cut(s) 60, 96
BmsI GCATC 1 cut(s) 165
Bsc4I CCNNNNNNNGG 2 cut(s) 45, 101
BseBI CCWGG 2 cut(s) 60, 96
BseGI GGATG 2 cut(s) 23, 56
BseLI CCNNNNNNNGG 2 cut(s) 45, 101
BshFI GGCC 1 cut(s) 29
BslFI GGGAC 1 cut(s) 169
BslI CCNNNNNNNGG 2 cut(s) 45, 101
BsmAI GTCTC 2 cut(s) 2, 114
BsmFI GGGAC 1 cut(s) 169
BsnI GGCC 1 cut(s) 29
Bsp143I GATC 2 cut(s) 98, 195
BspANI GGCC 1 cut(s) 29
BspHI TCATGA 1 cut(s) 235
BspPI GGATC 1 cut(s) 106
BssMI GATC 2 cut(s) 98, 195
BssNAI GTATAC 1 cut(s) 226
Bst1107I GTATAC 1 cut(s) 226
Bst2UI CCWGG 2 cut(s) 60, 96
BstC8I GCNNGC 1 cut(s) 27
BstDEI CTNAG 2 cut(s) 258, 282
BstENI CCTNNNNNAGG 1 cut(s) 99
BstF5I GGATG 2 cut(s) 23, 56
BstKTI GATC 2 cut(s) 101, 198
BstMAI GTCTC 2 cut(s) 2, 114
BstMBI GATC 2 cut(s) 98, 195
BstNI CCWGG 2 cut(s) 60, 96
BstSCI CCNGG 2 cut(s) 58, 94
BstZ17I GTATAC 1 cut(s) 226
BsuRI GGCC 1 cut(s) 29
BtsCI GGATG 2 cut(s) 23, 56
Cac8I GCNNGC 1 cut(s) 27
CciI TCATGA 1 cut(s) 235
Cfr13I GGNCC 1 cut(s) 36
CviAII CATG 5 cut(s) 31, 40, 141, 199, 236
CviJI RGCY 4 cut(s) 29, 135, 212, 255
CviKI_1 RGCY 4 cut(s) 29, 135, 212, 255
DdeI CTNAG 2 cut(s) 258, 282
DpnI GATC 2 cut(s) 100, 197
DpnII GATC 2 cut(s) 98, 195
Eco47I GGWCC 1 cut(s) 36
Eco57I CTGAAG 1 cut(s) 281
EcoNI CCTNNNNNAGG 1 cut(s) 99
EcoRII CCWGG 2 cut(s) 58, 94
FaeI CATG 5 cut(s) 34, 43, 144, 202, 239
FalI AAGNNNNNCTT 2 cut(s) 251, 283
FaqI GGGAC 1 cut(s) 169
FatI CATG 5 cut(s) 30, 39, 140, 198, 235
FblI GTMKAC 1 cut(s) 225
FokI GGATG 2 cut(s) 30, 63
HaeIII GGCC 1 cut(s) 29
Hin1II CATG 5 cut(s) 34, 43, 144, 202, 239
Hpy166II GTNNAC 1 cut(s) 226
Hpy188III TCNNGA 1 cut(s) 236
Hpy8I GTNNAC 1 cut(s) 226
HpyAV CCTTC 1 cut(s) 152
HpyCH4V TGCA 2 cut(s) 25, 178
HpyF3I CTNAG 2 cut(s) 258, 282
Hsp92II CATG 5 cut(s) 34, 43, 144, 202, 239
Kzo9I GATC 2 cut(s) 98, 195
LpnPI CCDG 8 cut(s) 11, 45, 72, 81, 87, 108, 185, 222
LweI GCATC 1 cut(s) 165
MaeIII GTNAC 1 cut(s) 74
MalI GATC 2 cut(s) 100, 197
MboI GATC 2 cut(s) 98, 195
MnlI CCTC 2 cut(s) 27, 283
MspA1I CMGCKG 1 cut(s) 212
MspR9I CCNGG 2 cut(s) 60, 96
MvaI CCWGG 2 cut(s) 60, 96
NdeII GATC 2 cut(s) 98, 195
NlaIII CATG 5 cut(s) 34, 43, 144, 202, 239
NmuCI GTSAC 1 cut(s) 74
PagI TCATGA 1 cut(s) 235
PflMI CCANNNNNTGG 1 cut(s) 45
PfoI TCCNGGA 1 cut(s) 94
Psp6I CCWGG 2 cut(s) 58, 94
PspGI CCWGG 2 cut(s) 58, 94
PspPI GGNCC 1 cut(s) 36
PvuII CAGCTG 1 cut(s) 212
Sau3AI GATC 2 cut(s) 98, 195
Sau96I GGNCC 1 cut(s) 36
ScrFI CCNGG 2 cut(s) 60, 96
SetI ASST 5 cut(s) 38, 76, 214, 257, 283
SfaNI GCATC 1 cut(s) 165
SinI GGWCC 1 cut(s) 36
SspI AATATT 1 cut(s) 111
StyD4I CCNGG 2 cut(s) 58, 94
TseFI GTSAC 1 cut(s) 74
Tsp45I GTSAC 1 cut(s) 74
TspDTI ATGAA 1 cut(s) 252
TspGWI ACGGA 1 cut(s) 20
Van91I CCANNNNNTGG 1 cut(s) 45
VpaK11BI GGWCC 1 cut(s) 36
XagI CCTNNNNNAGG 1 cut(s) 99
XmiI GTMKAC 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.