RchiOBHm_Chr5g0006501

riboflavin kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
4020590 .. 4021034
445 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 300 bp
ATGGTCTTGAAGATGTCCATCGCAGAGCCATTAAAGAAATTAGTTTCATGTGTTATCCTTGATTTGGATGGTACTCTACTACACACAGATGGCATCGTAAGTGATGTTTTAAGAGTTTATTTGGGCAAGTATGGAAAGAAATGGGATGGAAGGGAACTTCAAAAGATGGTTGGAAAAACACCACTCGAAGCTGCAGCTGCTATTGTGGAGGATTATGGGCTGTCTTGCACAACGAGTGAATTAATCTCAGAGCTAAACCCAATGAGATTAACTTCTGCAGCTACTTTCAAACACCAATAA

Protein Analysis

99

Amino Acids

10.87

Weight (kDa)

6.71

Isoelectric Point (pI)

30.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030211)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0006501
rosa_rugosa Rorug05G0252700.1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 73
AfiI CCNNNNNNNGG 1 cut(s) 64
AgsI TTSAA 3 cut(s) 10, 161, 289
AluBI AGCT 4 cut(s) 191, 197, 253, 281
AluI AGCT 4 cut(s) 191, 197, 253, 281
ApeKI GCWGC 4 cut(s) 191, 194, 197, 278
AseI ATTAAT 1 cut(s) 242
BbvI GCAGC 4 cut(s) 178, 184, 206, 290
BccI CCATC 5 cut(s) 26, 62, 83, 140, 160
BfmI CTRYAG 2 cut(s) 192, 276
BisI GCNGC 4 cut(s) 192, 195, 198, 279
BlsI GCNGC 4 cut(s) 193, 196, 199, 280
BmsI GCATC 1 cut(s) 102
BsaBI GATNNNNATC 1 cut(s) 17
Bsc4I CCNNNNNNNGG 1 cut(s) 64
Bse8I GATNNNNATC 1 cut(s) 17
BseGI GGATG 2 cut(s) 73, 151
BseJI GATNNNNATC 1 cut(s) 17
BseLI CCNNNNNNNGG 1 cut(s) 64
BseMII CTCAG 1 cut(s) 261
BseXI GCAGC 4 cut(s) 178, 184, 206, 290
BslI CCNNNNNNNGG 1 cut(s) 64
BspCNI CTCAG 1 cut(s) 260
BspMAI CTGCAG 2 cut(s) 196, 280
BstDEI CTNAG 1 cut(s) 247
BstF5I GGATG 2 cut(s) 73, 151
BstMWI GCNNNNNNNGC 1 cut(s) 197
BstSFI CTRYAG 2 cut(s) 192, 276
BstV1I GCAGC 4 cut(s) 178, 184, 206, 290
BtgZI GCGATG 1 cut(s) 4
BtsCI GGATG 2 cut(s) 73, 151
Csp6I GTAC 1 cut(s) 72
CviAII CATG 1 cut(s) 48
CviJI RGCY 6 cut(s) 28, 191, 197, 220, 253, 281
CviKI_1 RGCY 6 cut(s) 28, 191, 197, 220, 253, 281
CviQI GTAC 1 cut(s) 72
DdeI CTNAG 1 cut(s) 247
FaeI CATG 1 cut(s) 51
FaiI YATR 3 cut(s) 49, 132, 216
FatI CATG 1 cut(s) 47
Fnu4HI GCNGC 4 cut(s) 192, 195, 198, 279
FokI GGATG 2 cut(s) 80, 158
Fsp4HI GCNGC 4 cut(s) 192, 195, 198, 279
GluI GCNGC 4 cut(s) 192, 195, 198, 279
Hin1II CATG 1 cut(s) 51
Hpy188I TCNGA 1 cut(s) 250
Hpy188III TCNNGA 1 cut(s) 7
HpyAV CCTTC 1 cut(s) 144
HpyCH4V TGCA 3 cut(s) 194, 228, 278
HpyF10VI GCNNNNNNNGC 1 cut(s) 197
HpyF3I CTNAG 1 cut(s) 247
Hsp92II CATG 1 cut(s) 51
Lsp1109I GCAGC 4 cut(s) 178, 184, 206, 290
LweI GCATC 1 cut(s) 102
MboII GAAGA 1 cut(s) 22
MluCI AATT 2 cut(s) 38, 239
MmeI TCCRAC 1 cut(s) 151
MnlI CCTC 1 cut(s) 202
MseI TTAA 4 cut(s) 32, 110, 242, 269
MslI CAYNNNNRTG 1 cut(s) 87
MspA1I CMGCKG 1 cut(s) 197
MwoI GCNNNNNNNGC 1 cut(s) 197
NlaIII CATG 1 cut(s) 51
PkrI GCNGC 4 cut(s) 193, 196, 199, 280
PshBI ATTAAT 1 cut(s) 242
PstI CTGCAG 2 cut(s) 196, 280
PvuII CAGCTG 1 cut(s) 197
RsaI GTAC 1 cut(s) 73
RsaNI GTAC 1 cut(s) 72
RseI CAYNNNNRTG 1 cut(s) 87
SaqAI TTAA 4 cut(s) 32, 110, 242, 269
SatI GCNGC 4 cut(s) 192, 195, 198, 279
SetI ASST 4 cut(s) 193, 199, 255, 283
SfaNI GCATC 1 cut(s) 102
SfcI CTRYAG 2 cut(s) 192, 276
SgeI CNNG 7 cut(s) 19, 60, 71, 139, 197, 237, 246
SmiMI CAYNNNNRTG 1 cut(s) 87
Sse9I AATT 2 cut(s) 38, 239
TaqI TCGA 1 cut(s) 186
TasI AATT 2 cut(s) 38, 239
Tru1I TTAA 4 cut(s) 32, 110, 242, 269
Tru9I TTAA 4 cut(s) 32, 110, 242, 269
TseI GCWGC 4 cut(s) 191, 194, 197, 278
TspDTI ATGAA 1 cut(s) 36
VspI ATTAAT 1 cut(s) 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.