G-quadruplex DNA unwinding
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0026781 RchiOBHm_Chr5g0060101 RchiOBHm_Chr7g0223441 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 182 |
| AfaI | GTAC | 3 cut(s) | 90, 287, 302 |
| AgsI | TTSAA | 4 cut(s) | 52, 176, 233, 245 |
| AluBI | AGCT | 3 cut(s) | 55, 179, 227 |
| AluI | AGCT | 3 cut(s) | 55, 179, 227 |
| Alw26I | GTCTC | 2 cut(s) | 268, 314 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 270 |
| ApeKI | GCWGC | 1 cut(s) | 166 |
| ApoI | RAATTY | 1 cut(s) | 182 |
| AseI | ATTAAT | 1 cut(s) | 209 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 72 |
| AspLEI | GCGC | 1 cut(s) | 34 |
| BbvI | GCAGC | 1 cut(s) | 153 |
| BclI | TGATCA | 1 cut(s) | 195 |
| BcoDI | GTCTC | 2 cut(s) | 268, 314 |
| BfoI | RGCGCY | 1 cut(s) | 35 |
| BisI | GCNGC | 1 cut(s) | 167 |
| BlsI | GCNGC | 1 cut(s) | 168 |
| BpmI | CTGGAG | 1 cut(s) | 292 |
| BsaI | GGTCTC | 2 cut(s) | 268, 314 |
| BsaJI | CCNNGG | 1 cut(s) | 278 |
| BseDI | CCNNGG | 1 cut(s) | 278 |
| BseMII | CTCAG | 1 cut(s) | 92 |
| BseXI | GCAGC | 1 cut(s) | 153 |
| BsmAI | GTCTC | 2 cut(s) | 268, 314 |
| Bso31I | GGTCTC | 2 cut(s) | 268, 314 |
| Bsp1407I | TGTACA | 1 cut(s) | 300 |
| Bsp143I | GATC | 1 cut(s) | 195 |
| BspCNI | CTCAG | 1 cut(s) | 91 |
| BspHI | TCATGA | 1 cut(s) | 389 |
| BspTNI | GGTCTC | 2 cut(s) | 268, 314 |
| BsrGI | TGTACA | 1 cut(s) | 300 |
| BssECI | CCNNGG | 1 cut(s) | 278 |
| BssMI | GATC | 1 cut(s) | 195 |
| BssT1I | CCWWGG | 1 cut(s) | 278 |
| Bst4CI | ACNGT | 3 cut(s) | 63, 88, 110 |
| BstAUI | TGTACA | 1 cut(s) | 300 |
| BstDEI | CTNAG | 1 cut(s) | 78 |
| BstH2I | RGCGCY | 1 cut(s) | 35 |
| BstHHI | GCGC | 1 cut(s) | 34 |
| BstKTI | GATC | 1 cut(s) | 198 |
| BstMAI | GTCTC | 2 cut(s) | 268, 314 |
| BstMBI | GATC | 1 cut(s) | 195 |
| BstV1I | GCAGC | 1 cut(s) | 153 |
| BtsI | GCAGTG | 1 cut(s) | 161 |
| BtsIMutI | CAGTG | 1 cut(s) | 161 |
| CaiI | CAGNNNCTG | 1 cut(s) | 270 |
| CciI | TCATGA | 1 cut(s) | 389 |
| CfoI | GCGC | 1 cut(s) | 34 |
| CseI | GACGC | 1 cut(s) | 210 |
| Csp6I | GTAC | 3 cut(s) | 89, 286, 301 |
| CviAII | CATG | 2 cut(s) | 350, 390 |
| CviJI | RGCY | 3 cut(s) | 55, 179, 227 |
| CviKI_1 | RGCY | 3 cut(s) | 55, 179, 227 |
| CviQI | GTAC | 3 cut(s) | 89, 286, 301 |
| DdeI | CTNAG | 1 cut(s) | 78 |
| DpnI | GATC | 1 cut(s) | 197 |
| DpnII | GATC | 1 cut(s) | 195 |
| Eco130I | CCWWGG | 1 cut(s) | 278 |
| Eco31I | GGTCTC | 2 cut(s) | 268, 314 |
| EcoT14I | CCWWGG | 1 cut(s) | 278 |
| ErhI | CCWWGG | 1 cut(s) | 278 |
| FaeI | CATG | 2 cut(s) | 353, 393 |
| FaiI | YATR | 7 cut(s) | 120, 148, 318, 351, 356, 381, 391 |
| FatI | CATG | 2 cut(s) | 349, 389 |
| FbaI | TGATCA | 1 cut(s) | 195 |
| Fnu4HI | GCNGC | 1 cut(s) | 167 |
| Fsp4HI | GCNGC | 1 cut(s) | 167 |
| GlaI | GCGC | 1 cut(s) | 33 |
| GluI | GCNGC | 1 cut(s) | 167 |
| GsuI | CTGGAG | 1 cut(s) | 292 |
| HaeII | RGCGCY | 1 cut(s) | 35 |
| HgaI | GACGC | 1 cut(s) | 210 |
| HhaI | GCGC | 1 cut(s) | 34 |
| Hin1II | CATG | 2 cut(s) | 353, 393 |
| Hin6I | GCGC | 1 cut(s) | 32 |
| HinP1I | GCGC | 1 cut(s) | 32 |
| HincII | GTYRAC | 1 cut(s) | 84 |
| HindII | GTYRAC | 1 cut(s) | 84 |
| HinfI | GANTC | 6 cut(s) | 68, 125, 253, 267, 346, 365 |
| Hpy166II | GTNNAC | 1 cut(s) | 84 |
| Hpy188I | TCNGA | 3 cut(s) | 200, 266, 370 |
| Hpy188III | TCNNGA | 5 cut(s) | 152, 188, 250, 271, 390 |
| Hpy8I | GTNNAC | 1 cut(s) | 84 |
| HpyCH4III | ACNGT | 3 cut(s) | 63, 88, 110 |
| HpyCH4V | TGCA | 2 cut(s) | 16, 122 |
| HpyF3I | CTNAG | 1 cut(s) | 78 |
| Hsp92II | CATG | 2 cut(s) | 353, 393 |
| HspAI | GCGC | 1 cut(s) | 32 |
| Ksp22I | TGATCA | 1 cut(s) | 195 |
| Kzo9I | GATC | 1 cut(s) | 195 |
| LmnI | GCTCC | 1 cut(s) | 60 |
| LpnPI | CCDG | 3 cut(s) | 137, 201, 256 |
| Lsp1109I | GCAGC | 1 cut(s) | 153 |
| MaeIII | GTNAC | 1 cut(s) | 159 |
| MalI | GATC | 1 cut(s) | 197 |
| MboI | GATC | 1 cut(s) | 195 |
| MluCI | AATT | 3 cut(s) | 182, 238, 357 |
| MnlI | CCTC | 2 cut(s) | 87, 328 |
| MroXI | GAANNNNTTC | 1 cut(s) | 72 |
| MseI | TTAA | 1 cut(s) | 209 |
| NdeII | GATC | 1 cut(s) | 195 |
| NlaIII | CATG | 2 cut(s) | 353, 393 |
| NmuCI | GTSAC | 1 cut(s) | 159 |
| PagI | TCATGA | 1 cut(s) | 389 |
| PdmI | GAANNNNTTC | 1 cut(s) | 72 |
| PfeI | GAWTC | 6 cut(s) | 68, 125, 253, 267, 346, 365 |
| PkrI | GCNGC | 1 cut(s) | 168 |
| PshBI | ATTAAT | 1 cut(s) | 209 |
| PstNI | CAGNNNCTG | 1 cut(s) | 270 |
| RsaI | GTAC | 3 cut(s) | 90, 287, 302 |
| RsaNI | GTAC | 3 cut(s) | 89, 286, 301 |
| SaqAI | TTAA | 1 cut(s) | 209 |
| SatI | GCNGC | 1 cut(s) | 167 |
| Sau3AI | GATC | 1 cut(s) | 195 |
| SetI | ASST | 4 cut(s) | 57, 161, 181, 229 |
| SgeI | CNNG | 9 cut(s) | 151, 164, 188, 200, 262, 269, 283, 291, 362 |
| Sse9I | AATT | 3 cut(s) | 182, 238, 357 |
| StyI | CCWWGG | 1 cut(s) | 278 |
| TaaI | ACNGT | 3 cut(s) | 63, 88, 110 |
| TasI | AATT | 3 cut(s) | 182, 238, 357 |
| TatI | WGTACW | 3 cut(s) | 88, 285, 300 |
| TfiI | GAWTC | 6 cut(s) | 68, 125, 253, 267, 346, 365 |
| Tru1I | TTAA | 1 cut(s) | 209 |
| Tru9I | TTAA | 1 cut(s) | 209 |
| TscAI | CASTG | 1 cut(s) | 168 |
| TseFI | GTSAC | 1 cut(s) | 159 |
| TseI | GCWGC | 1 cut(s) | 166 |
| Tsp45I | GTSAC | 1 cut(s) | 159 |
| TspDTI | ATGAA | 3 cut(s) | 135, 338, 378 |
| TspRI | CASTG | 1 cut(s) | 168 |
| VspI | ATTAAT | 1 cut(s) | 209 |
| XapI | RAATTY | 1 cut(s) | 182 |
| XmnI | GAANNNNTTC | 1 cut(s) | 72 |