Sphingosine-1-phosphate
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0396231 |
| rosa_wichuraiana | Rw6G006460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 385 |
| AccI | GTMKAC | 1 cut(s) | 179 |
| AccII | CGCG | 1 cut(s) | 373 |
| AciI | CCGC | 2 cut(s) | 373, 385 |
| AcoI | YGGCCR | 1 cut(s) | 121 |
| AcsI | RAATTY | 1 cut(s) | 110 |
| AfaI | GTAC | 2 cut(s) | 66, 284 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 161, 373 |
| AgsI | TTSAA | 3 cut(s) | 77, 150, 188 |
| AjnI | CCWGG | 3 cut(s) | 29, 268, 366 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 102, 134 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 374 |
| AluBI | AGCT | 4 cut(s) | 57, 102, 252, 262 |
| AluI | AGCT | 4 cut(s) | 57, 102, 252, 262 |
| Ama87I | CYCGRG | 1 cut(s) | 97 |
| AoxI | GGCC | 3 cut(s) | 121, 225, 238 |
| ApoI | RAATTY | 1 cut(s) | 110 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 81 |
| AspLEI | GCGC | 2 cut(s) | 96, 373 |
| AsuHPI | GGTGA | 1 cut(s) | 30 |
| AvaI | CYCGRG | 1 cut(s) | 97 |
| BciT130I | CCWGG | 3 cut(s) | 31, 270, 368 |
| BfaI | CTAG | 2 cut(s) | 62, 143 |
| BfoI | RGCGCY | 1 cut(s) | 97 |
| Bme1390I | CCNGG | 3 cut(s) | 31, 270, 368 |
| BmeT110I | CYCGRG | 1 cut(s) | 97 |
| BmiI | GGNNCC | 1 cut(s) | 267 |
| BmrFI | CCNGG | 3 cut(s) | 31, 270, 368 |
| BpmI | CTGGAG | 1 cut(s) | 291 |
| BsaJI | CCNNGG | 1 cut(s) | 9 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 374, 404 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 161, 373 |
| Bse118I | RCCGGY | 1 cut(s) | 123 |
| BseBI | CCWGG | 3 cut(s) | 31, 270, 368 |
| BseDI | CCNNGG | 1 cut(s) | 9 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 161, 373 |
| BsgI | GTGCAG | 1 cut(s) | 227 |
| Bsh1236I | CGCG | 1 cut(s) | 373 |
| BshFI | GGCC | 3 cut(s) | 123, 227, 240 |
| BsiHKCI | CYCGRG | 1 cut(s) | 97 |
| BsiSI | CCGG | 1 cut(s) | 124 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 161, 373 |
| BsnI | GGCC | 3 cut(s) | 123, 227, 240 |
| BsoBI | CYCGRG | 1 cut(s) | 97 |
| Bsp143I | GATC | 1 cut(s) | 139 |
| BspACI | CCGC | 2 cut(s) | 373, 385 |
| BspANI | GGCC | 3 cut(s) | 123, 227, 240 |
| BspFNI | CGCG | 1 cut(s) | 373 |
| BspHI | TCATGA | 1 cut(s) | 246 |
| BspLI | GGNNCC | 1 cut(s) | 267 |
| BsrBI | CCGCTC | 1 cut(s) | 385 |
| BsrFI | RCCGGY | 1 cut(s) | 123 |
| BssAI | RCCGGY | 1 cut(s) | 123 |
| BssECI | CCNNGG | 1 cut(s) | 9 |
| BssMI | GATC | 1 cut(s) | 139 |
| BssT1I | CCWWGG | 1 cut(s) | 9 |
| Bst2UI | CCWGG | 3 cut(s) | 31, 270, 368 |
| Bst6I | CTCTTC | 1 cut(s) | 173 |
| BstDEI | CTNAG | 2 cut(s) | 197, 338 |
| BstFNI | CGCG | 1 cut(s) | 373 |
| BstH2I | RGCGCY | 1 cut(s) | 97 |
| BstHHI | GCGC | 2 cut(s) | 96, 373 |
| BstKTI | GATC | 1 cut(s) | 142 |
| BstMBI | GATC | 1 cut(s) | 139 |
| BstNI | CCWGG | 3 cut(s) | 31, 270, 368 |
| BstSCI | CCNGG | 3 cut(s) | 29, 268, 366 |
| BstUI | CGCG | 1 cut(s) | 373 |
| BsuRI | GGCC | 3 cut(s) | 123, 227, 240 |
| CciI | TCATGA | 1 cut(s) | 246 |
| CfoI | GCGC | 2 cut(s) | 96, 373 |
| Cfr10I | RCCGGY | 1 cut(s) | 123 |
| CseI | GACGC | 2 cut(s) | 165, 190 |
| Csp6I | GTAC | 2 cut(s) | 65, 283 |
| CviAII | CATG | 1 cut(s) | 247 |
| CviJI | RGCY | 8 cut(s) | 57, 102, 123, 134, 227, 240, 252, 262 |
| CviKI_1 | RGCY | 8 cut(s) | 57, 102, 123, 134, 227, 240, 252, 262 |
| CviQI | GTAC | 2 cut(s) | 65, 283 |
| DdeI | CTNAG | 2 cut(s) | 197, 338 |
| DpnI | GATC | 1 cut(s) | 141 |
| DpnII | GATC | 1 cut(s) | 139 |
| EaeI | YGGCCR | 1 cut(s) | 121 |
| Eam1104I | CTCTTC | 1 cut(s) | 173 |
| EarI | CTCTTC | 1 cut(s) | 173 |
| Eco130I | CCWWGG | 1 cut(s) | 9 |
| Eco147I | AGGCCT | 1 cut(s) | 240 |
| Eco88I | CYCGRG | 1 cut(s) | 97 |
| EcoRI | GAATTC | 1 cut(s) | 110 |
| EcoRII | CCWGG | 3 cut(s) | 29, 268, 366 |
| EcoT14I | CCWWGG | 1 cut(s) | 9 |
| ErhI | CCWWGG | 1 cut(s) | 9 |
| FaeI | CATG | 1 cut(s) | 250 |
| FaiI | YATR | 2 cut(s) | 248, 287 |
| FatI | CATG | 1 cut(s) | 246 |
| FauI | CCCGC | 2 cut(s) | 366, 378 |
| FblI | GTMKAC | 1 cut(s) | 179 |
| FspBI | CTAG | 2 cut(s) | 62, 143 |
| GlaI | GCGC | 2 cut(s) | 95, 372 |
| GsuI | CTGGAG | 1 cut(s) | 291 |
| HaeII | RGCGCY | 1 cut(s) | 97 |
| HaeIII | GGCC | 3 cut(s) | 123, 227, 240 |
| HapII | CCGG | 1 cut(s) | 124 |
| HgaI | GACGC | 2 cut(s) | 165, 190 |
| HhaI | GCGC | 2 cut(s) | 96, 373 |
| Hin1II | CATG | 1 cut(s) | 250 |
| Hin6I | GCGC | 2 cut(s) | 94, 371 |
| HinP1I | GCGC | 2 cut(s) | 94, 371 |
| HincII | GTYRAC | 1 cut(s) | 180 |
| HindII | GTYRAC | 1 cut(s) | 180 |
| HindIII | AAGCTT | 1 cut(s) | 55 |
| HinfI | GANTC | 2 cut(s) | 165, 219 |
| HpaII | CCGG | 1 cut(s) | 124 |
| HphI | GGTGA | 1 cut(s) | 30 |
| Hpy166II | GTNNAC | 2 cut(s) | 67, 180 |
| Hpy188I | TCNGA | 2 cut(s) | 139, 159 |
| Hpy188III | TCNNGA | 3 cut(s) | 47, 247, 394 |
| Hpy8I | GTNNAC | 2 cut(s) | 67, 180 |
| Hpy99I | CGWCG | 2 cut(s) | 181, 184 |
| HpyAV | CCTTC | 2 cut(s) | 44, 208 |
| HpyCH4V | TGCA | 2 cut(s) | 19, 208 |
| HpyF3I | CTNAG | 2 cut(s) | 197, 338 |
| Hsp92II | CATG | 1 cut(s) | 250 |
| HspAI | GCGC | 2 cut(s) | 94, 371 |
| Kzo9I | GATC | 1 cut(s) | 139 |
| LmnI | GCTCC | 1 cut(s) | 382 |
| MaeI | CTAG | 2 cut(s) | 62, 143 |
| MaeIII | GTNAC | 2 cut(s) | 126, 331 |
| MalI | GATC | 1 cut(s) | 141 |
| MbiI | CCGCTC | 1 cut(s) | 385 |
| MboI | GATC | 1 cut(s) | 139 |
| MboII | GAAGA | 2 cut(s) | 160, 289 |
| MluCI | AATT | 4 cut(s) | 110, 316, 348, 361 |
| MlyI | GAGTC | 2 cut(s) | 159, 228 |
| MnlI | CCTC | 2 cut(s) | 145, 165 |
| MroXI | GAANNNNTTC | 1 cut(s) | 81 |
| MspI | CCGG | 1 cut(s) | 124 |
| MspR9I | CCNGG | 3 cut(s) | 31, 270, 368 |
| MvaI | CCWGG | 3 cut(s) | 31, 270, 368 |
| MvnI | CGCG | 1 cut(s) | 373 |
| NdeII | GATC | 1 cut(s) | 139 |
| NlaIII | CATG | 1 cut(s) | 250 |
| NlaIV | GGNNCC | 1 cut(s) | 267 |
| NmeAIII | GCCGAG | 1 cut(s) | 70 |
| PaeR7I | CTCGAG | 1 cut(s) | 97 |
| PagI | TCATGA | 1 cut(s) | 246 |
| PceI | AGGCCT | 1 cut(s) | 240 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 111 |
| PdmI | GAANNNNTTC | 1 cut(s) | 81 |
| PfoI | TCCNGGA | 1 cut(s) | 268 |
| PleI | GAGTC | 2 cut(s) | 159, 227 |
| PpsI | GAGTC | 2 cut(s) | 159, 227 |
| Psp6I | CCWGG | 3 cut(s) | 29, 268, 366 |
| PspGI | CCWGG | 3 cut(s) | 29, 268, 366 |
| PspN4I | GGNNCC | 1 cut(s) | 267 |
| PspXI | VCTCGAGB | 1 cut(s) | 97 |
| RsaI | GTAC | 2 cut(s) | 66, 284 |
| RsaNI | GTAC | 2 cut(s) | 65, 283 |
| SalI | GTCGAC | 1 cut(s) | 178 |
| Sau3AI | GATC | 1 cut(s) | 139 |
| SchI | GAGTC | 2 cut(s) | 159, 228 |
| ScrFI | CCNGG | 3 cut(s) | 31, 270, 368 |
| SetI | ASST | 6 cut(s) | 15, 59, 104, 254, 264, 309 |
| Sfr274I | CTCGAG | 1 cut(s) | 97 |
| SgrDI | CGTCGACG | 1 cut(s) | 178 |
| SlaI | CTCGAG | 1 cut(s) | 97 |
| SmlI | CTYRAG | 1 cut(s) | 97 |
| SmoI | CTYRAG | 1 cut(s) | 97 |
| Sse9I | AATT | 4 cut(s) | 110, 316, 348, 361 |
| SseBI | AGGCCT | 1 cut(s) | 240 |
| SsiI | CCGC | 2 cut(s) | 373, 385 |
| SspMI | CTAG | 2 cut(s) | 62, 143 |
| StuI | AGGCCT | 1 cut(s) | 240 |
| StyD4I | CCNGG | 3 cut(s) | 29, 268, 366 |
| StyI | CCWWGG | 1 cut(s) | 9 |
| TaqI | TCGA | 3 cut(s) | 46, 98, 179 |
| TasI | AATT | 4 cut(s) | 110, 316, 348, 361 |
| TatI | WGTACW | 2 cut(s) | 64, 282 |
| TspDTI | ATGAA | 2 cut(s) | 235, 244 |
| TspGWI | ACGGA | 1 cut(s) | 306 |
| XapI | RAATTY | 1 cut(s) | 110 |
| XhoI | CTCGAG | 1 cut(s) | 97 |
| XmiI | GTMKAC | 1 cut(s) | 179 |
| XmnI | GAANNNNTTC | 1 cut(s) | 81 |
| XspI | CTAG | 2 cut(s) | 62, 143 |