RchiOBHm_Chr4g0411261

source UniProtKB

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
35032949 .. 35034311
1363 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 168 bp
ATGAGGTATTTCTCAAGGATAGATTACCAAACTGGGTTGCTGGTTCTGGATATGTGGCCTTGGTTCGACAAACTACCTAAAGTAAAACCGCTTCCGGGCGTACGTAAACAACCGGGTGAGGTTGAGTGTGGCTATTATGTTATGCGATACATAAAGGAAATTATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

55

Amino Acids

6.67

Weight (kDa)

9.21

Isoelectric Point (pI)

25.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030024)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0411261 RchiOBHm_Chr7g0238101

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 89
AfaI GTAC 1 cut(s) 102
AfiI CCNNNNNNNGG 1 cut(s) 95
AoxI GGCC 1 cut(s) 56
AsuC2I CCSGG 2 cut(s) 96, 114
AsuHPI GGTGA 1 cut(s) 128
BarI GAAGNNNNNNTAC 2 cut(s) 75, 107
BcnI CCSGG 2 cut(s) 96, 114
Bme1390I CCNGG 2 cut(s) 96, 114
BmrFI CCNGG 2 cut(s) 96, 114
BmrI ACTGGG 1 cut(s) 42
BmuI ACTGGG 1 cut(s) 42
BpuMI CCSGG 2 cut(s) 96, 114
BsaAI YACGTR 1 cut(s) 104
BsaJI CCNNGG 1 cut(s) 59
Bsc4I CCNNNNNNNGG 1 cut(s) 95
Bse1I ACTGG 1 cut(s) 37
BseDI CCNNGG 1 cut(s) 59
BseLI CCNNNNNNNGG 1 cut(s) 95
BseNI ACTGG 1 cut(s) 37
BshFI GGCC 1 cut(s) 58
BsiSI CCGG 2 cut(s) 95, 113
BsiWI CGTACG 1 cut(s) 100
BslI CCNNNNNNNGG 1 cut(s) 95
BsnI GGCC 1 cut(s) 58
BspACI CCGC 1 cut(s) 89
BspANI GGCC 1 cut(s) 58
BsrI ACTGG 1 cut(s) 37
BssECI CCNNGG 1 cut(s) 59
BssT1I CCWWGG 1 cut(s) 59
BstBAI YACGTR 1 cut(s) 104
BstSCI CCNGG 2 cut(s) 94, 112
BstSNI TACGTA 1 cut(s) 104
BsuRI GGCC 1 cut(s) 58
Csp6I GTAC 1 cut(s) 101
CviJI RGCY 2 cut(s) 58, 132
CviKI_1 RGCY 2 cut(s) 58, 132
CviQI GTAC 1 cut(s) 101
Eco105I TACGTA 1 cut(s) 104
Eco130I CCWWGG 1 cut(s) 59
EcoT14I CCWWGG 1 cut(s) 59
ErhI CCWWGG 1 cut(s) 59
FaiI YATR 6 cut(s) 53, 138, 143, 152, 164, 166
HaeIII GGCC 1 cut(s) 58
HapII CCGG 2 cut(s) 95, 113
HpaII CCGG 2 cut(s) 95, 113
HphI GGTGA 1 cut(s) 128
Hpy166II GTNNAC 1 cut(s) 107
Hpy188III TCNNGA 1 cut(s) 47
Hpy8I GTNNAC 1 cut(s) 107
HpyCH4IV ACGT 1 cut(s) 103
HpySE526I ACGT 1 cut(s) 103
LpnPI CCDG 5 cut(s) 18, 26, 32, 108, 126
MaeII ACGT 1 cut(s) 103
MluCI AATT 1 cut(s) 159
MnlI CCTC 1 cut(s) 112
MspI CCGG 2 cut(s) 95, 113
MspR9I CCNGG 2 cut(s) 96, 114
NciI CCSGG 2 cut(s) 96, 114
Pfl23II CGTACG 1 cut(s) 100
Ppu21I YACGTR 1 cut(s) 104
PspLI CGTACG 1 cut(s) 100
RsaI GTAC 1 cut(s) 102
RsaNI GTAC 1 cut(s) 101
ScrFI CCNGG 2 cut(s) 96, 114
SetI ASST 4 cut(s) 8, 79, 106, 123
SgeI CNNG 9 cut(s) 27, 45, 53, 59, 72, 107, 108, 125, 126
SmlI CTYRAG 1 cut(s) 13
SmoI CTYRAG 1 cut(s) 13
SnaBI TACGTA 1 cut(s) 104
Sse9I AATT 1 cut(s) 159
SsiI CCGC 1 cut(s) 89
StyD4I CCNGG 2 cut(s) 94, 112
StyI CCWWGG 1 cut(s) 59
TaiI ACGT 1 cut(s) 106
TaqI TCGA 1 cut(s) 66
TasI AATT 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.