Ubiquitin carboxyl-terminal hydrolase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0455291 RchiOBHm_Chr3g0478841 |
| rosa_roxburghii | Rroxscaffold_1G00064700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 154 |
| AciI | CCGC | 1 cut(s) | 150 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 72 |
| AgsI | TTSAA | 1 cut(s) | 111 |
| ApeKI | GCWGC | 1 cut(s) | 48 |
| BbvI | GCAGC | 1 cut(s) | 60 |
| BfmI | CTRYAG | 1 cut(s) | 67 |
| BglII | AGATCT | 1 cut(s) | 6 |
| BisI | GCNGC | 1 cut(s) | 49 |
| BlsI | GCNGC | 1 cut(s) | 50 |
| BmsI | GCATC | 2 cut(s) | 73, 149 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 72 |
| Bse1I | ACTGG | 1 cut(s) | 20 |
| BseGI | GGATG | 2 cut(s) | 88, 140 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 72 |
| BseNI | ACTGG | 1 cut(s) | 20 |
| BseXI | GCAGC | 1 cut(s) | 60 |
| Bsh1285I | CGRYCG | 1 cut(s) | 150 |
| BsiEI | CGRYCG | 1 cut(s) | 150 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 72 |
| Bsp143I | GATC | 1 cut(s) | 6 |
| BspACI | CCGC | 1 cut(s) | 150 |
| BsrI | ACTGG | 1 cut(s) | 20 |
| BssMI | GATC | 1 cut(s) | 6 |
| Bst4CI | ACNGT | 2 cut(s) | 43, 71 |
| BstF5I | GGATG | 2 cut(s) | 88, 140 |
| BstKTI | GATC | 1 cut(s) | 9 |
| BstMBI | GATC | 1 cut(s) | 6 |
| BstMCI | CGRYCG | 1 cut(s) | 150 |
| BstSFI | CTRYAG | 1 cut(s) | 67 |
| BstV1I | GCAGC | 1 cut(s) | 60 |
| BstX2I | RGATCY | 1 cut(s) | 6 |
| BstYI | RGATCY | 1 cut(s) | 6 |
| BtsCI | GGATG | 2 cut(s) | 88, 140 |
| BtsIMutI | CAGTG | 2 cut(s) | 31, 48 |
| DpnI | GATC | 1 cut(s) | 8 |
| DpnII | GATC | 1 cut(s) | 6 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 154 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 154 |
| FaiI | YATR | 1 cut(s) | 101 |
| Fnu4HI | GCNGC | 1 cut(s) | 49 |
| FokI | GGATG | 2 cut(s) | 95, 127 |
| Fsp4HI | GCNGC | 1 cut(s) | 49 |
| GluI | GCNGC | 1 cut(s) | 49 |
| HinfI | GANTC | 4 cut(s) | 16, 34, 92, 107 |
| Hpy166II | GTNNAC | 1 cut(s) | 55 |
| Hpy188I | TCNGA | 3 cut(s) | 15, 33, 39 |
| Hpy8I | GTNNAC | 1 cut(s) | 55 |
| HpyCH4III | ACNGT | 2 cut(s) | 43, 71 |
| HpyCH4V | TGCA | 1 cut(s) | 86 |
| Kzo9I | GATC | 1 cut(s) | 6 |
| LpnPI | CCDG | 1 cut(s) | 33 |
| Lsp1109I | GCAGC | 1 cut(s) | 60 |
| LweI | GCATC | 2 cut(s) | 73, 149 |
| MalI | GATC | 1 cut(s) | 8 |
| MboI | GATC | 1 cut(s) | 6 |
| MboII | GAAGA | 1 cut(s) | 16 |
| MflI | RGATCY | 1 cut(s) | 6 |
| MluCI | AATT | 1 cut(s) | 168 |
| MlyI | GAGTC | 1 cut(s) | 28 |
| MmeI | TCCRAC | 1 cut(s) | 62 |
| MnlI | CCTC | 1 cut(s) | 72 |
| MseI | TTAA | 1 cut(s) | 167 |
| NdeII | GATC | 1 cut(s) | 6 |
| PfeI | GAWTC | 3 cut(s) | 16, 92, 107 |
| PkrI | GCNGC | 1 cut(s) | 50 |
| PleI | GAGTC | 1 cut(s) | 28 |
| PpsI | GAGTC | 1 cut(s) | 28 |
| PsuI | RGATCY | 1 cut(s) | 6 |
| SaqAI | TTAA | 1 cut(s) | 167 |
| SatI | GCNGC | 1 cut(s) | 49 |
| Sau3AI | GATC | 1 cut(s) | 6 |
| SchI | GAGTC | 1 cut(s) | 28 |
| SfaNI | GCATC | 2 cut(s) | 73, 149 |
| SfcI | CTRYAG | 1 cut(s) | 67 |
| SgeI | CNNG | 3 cut(s) | 32, 101, 157 |
| Sse9I | AATT | 1 cut(s) | 168 |
| SsiI | CCGC | 1 cut(s) | 150 |
| TaaI | ACNGT | 2 cut(s) | 43, 71 |
| TasI | AATT | 1 cut(s) | 168 |
| TfiI | GAWTC | 3 cut(s) | 16, 92, 107 |
| Tru1I | TTAA | 1 cut(s) | 167 |
| Tru9I | TTAA | 1 cut(s) | 167 |
| TscAI | CASTG | 2 cut(s) | 31, 48 |
| TseI | GCWGC | 1 cut(s) | 48 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 2 cut(s) | 31, 48 |