Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0455291 RchiOBHm_Chr3g0478841 |
| rosa_roxburghii | Rroxscaffold_1G00064700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 42 |
| AdeI | CACNNNGTG | 1 cut(s) | 45 |
| AfaI | GTAC | 1 cut(s) | 108 |
| AfeI | AGCGCT | 1 cut(s) | 10 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 93 |
| AgsI | TTSAA | 2 cut(s) | 64, 117 |
| AluBI | AGCT | 1 cut(s) | 173 |
| AluI | AGCT | 1 cut(s) | 173 |
| Alw26I | GTCTC | 1 cut(s) | 22 |
| Aor51HI | AGCGCT | 1 cut(s) | 10 |
| ApeKI | GCWGC | 2 cut(s) | 67, 170 |
| AspLEI | GCGC | 1 cut(s) | 11 |
| BbvI | GCAGC | 2 cut(s) | 79, 182 |
| BccI | CCATC | 1 cut(s) | 128 |
| BcoDI | GTCTC | 1 cut(s) | 22 |
| BfmI | CTRYAG | 1 cut(s) | 88 |
| BfoI | RGCGCY | 1 cut(s) | 12 |
| BglII | AGATCT | 1 cut(s) | 25 |
| BisI | GCNGC | 2 cut(s) | 68, 171 |
| BlsI | GCNGC | 2 cut(s) | 69, 172 |
| BmsI | GCATC | 1 cut(s) | 170 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 93 |
| BseGI | GGATG | 2 cut(s) | 109, 161 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 93 |
| BseMII | CTCAG | 1 cut(s) | 56 |
| BseXI | GCAGC | 2 cut(s) | 79, 182 |
| BseYI | CCCAGC | 1 cut(s) | 166 |
| BslFI | GGGAC | 1 cut(s) | 33 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 93 |
| BsmAI | GTCTC | 1 cut(s) | 22 |
| BsmFI | GGGAC | 1 cut(s) | 33 |
| Bsp1407I | TGTACA | 1 cut(s) | 106 |
| Bsp143I | GATC | 1 cut(s) | 25 |
| BspCNI | CTCAG | 1 cut(s) | 55 |
| BsrGI | TGTACA | 1 cut(s) | 106 |
| BssMI | GATC | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 1 cut(s) | 92 |
| BstAUI | TGTACA | 1 cut(s) | 106 |
| BstDEI | CTNAG | 1 cut(s) | 42 |
| BstF5I | GGATG | 2 cut(s) | 109, 161 |
| BstH2I | RGCGCY | 1 cut(s) | 12 |
| BstHHI | GCGC | 1 cut(s) | 11 |
| BstKTI | GATC | 1 cut(s) | 28 |
| BstMAI | GTCTC | 1 cut(s) | 22 |
| BstMBI | GATC | 1 cut(s) | 25 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 167 |
| BstSFI | CTRYAG | 1 cut(s) | 88 |
| BstV1I | GCAGC | 2 cut(s) | 79, 182 |
| BstX2I | RGATCY | 1 cut(s) | 25 |
| BstYI | RGATCY | 1 cut(s) | 25 |
| BtsCI | GGATG | 2 cut(s) | 109, 161 |
| BtsIMutI | CAGTG | 1 cut(s) | 50 |
| CfoI | GCGC | 1 cut(s) | 11 |
| Csp6I | GTAC | 1 cut(s) | 107 |
| CviJI | RGCY | 2 cut(s) | 173, 196 |
| CviKI_1 | RGCY | 2 cut(s) | 173, 196 |
| CviQI | GTAC | 1 cut(s) | 107 |
| DdeI | CTNAG | 1 cut(s) | 42 |
| DpnI | GATC | 1 cut(s) | 27 |
| DpnII | GATC | 1 cut(s) | 25 |
| DraIII | CACNNNGTG | 1 cut(s) | 45 |
| Eco47III | AGCGCT | 1 cut(s) | 10 |
| Eco57I | CTGAAG | 1 cut(s) | 42 |
| FaqI | GGGAC | 1 cut(s) | 33 |
| Fnu4HI | GCNGC | 2 cut(s) | 68, 171 |
| FokI | GGATG | 2 cut(s) | 116, 148 |
| Fsp4HI | GCNGC | 2 cut(s) | 68, 171 |
| GlaI | GCGC | 1 cut(s) | 10 |
| GluI | GCNGC | 2 cut(s) | 68, 171 |
| GsaI | CCCAGC | 1 cut(s) | 170 |
| HaeII | RGCGCY | 1 cut(s) | 12 |
| HhaI | GCGC | 1 cut(s) | 11 |
| Hin6I | GCGC | 1 cut(s) | 9 |
| HinP1I | GCGC | 1 cut(s) | 9 |
| HinfI | GANTC | 3 cut(s) | 35, 53, 113 |
| Hpy166II | GTNNAC | 2 cut(s) | 76, 124 |
| Hpy188I | TCNGA | 4 cut(s) | 22, 34, 58, 133 |
| Hpy188III | TCNNGA | 1 cut(s) | 50 |
| Hpy8I | GTNNAC | 2 cut(s) | 76, 124 |
| HpyCH4III | ACNGT | 1 cut(s) | 92 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 167 |
| HpyF3I | CTNAG | 1 cut(s) | 42 |
| HspAI | GCGC | 1 cut(s) | 9 |
| Kzo9I | GATC | 1 cut(s) | 25 |
| LmnI | GCTCC | 1 cut(s) | 138 |
| LpnPI | CCDG | 1 cut(s) | 180 |
| Lsp1109I | GCAGC | 2 cut(s) | 79, 182 |
| LweI | GCATC | 1 cut(s) | 170 |
| MalI | GATC | 1 cut(s) | 27 |
| MboI | GATC | 1 cut(s) | 25 |
| MboII | GAAGA | 1 cut(s) | 35 |
| MfeI | CAATTG | 1 cut(s) | 117 |
| MflI | RGATCY | 1 cut(s) | 25 |
| MluCI | AATT | 3 cut(s) | 117, 127, 189 |
| MlyI | GAGTC | 1 cut(s) | 47 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MnlI | CCTC | 2 cut(s) | 93, 139 |
| MseI | TTAA | 1 cut(s) | 188 |
| MunI | CAATTG | 1 cut(s) | 117 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 167 |
| NdeII | GATC | 1 cut(s) | 25 |
| PfeI | GAWTC | 2 cut(s) | 35, 113 |
| PkrI | GCNGC | 2 cut(s) | 69, 172 |
| PleI | GAGTC | 1 cut(s) | 47 |
| PpsI | GAGTC | 1 cut(s) | 47 |
| PspFI | CCCAGC | 1 cut(s) | 166 |
| PsuI | RGATCY | 1 cut(s) | 25 |
| RsaI | GTAC | 1 cut(s) | 108 |
| RsaNI | GTAC | 1 cut(s) | 107 |
| SaqAI | TTAA | 1 cut(s) | 188 |
| SatI | GCNGC | 2 cut(s) | 68, 171 |
| Sau3AI | GATC | 1 cut(s) | 25 |
| SchI | GAGTC | 1 cut(s) | 47 |
| SetI | ASST | 2 cut(s) | 150, 175 |
| SfaNI | GCATC | 1 cut(s) | 170 |
| SfcI | CTRYAG | 1 cut(s) | 88 |
| SgeI | CNNG | 6 cut(s) | 24, 62, 76, 83, 122, 179 |
| Sse9I | AATT | 3 cut(s) | 117, 127, 189 |
| TaaI | ACNGT | 1 cut(s) | 92 |
| TasI | AATT | 3 cut(s) | 117, 127, 189 |
| TatI | WGTACW | 1 cut(s) | 106 |
| TfiI | GAWTC | 2 cut(s) | 35, 113 |
| Tru1I | TTAA | 1 cut(s) | 188 |
| Tru9I | TTAA | 1 cut(s) | 188 |
| TscAI | CASTG | 1 cut(s) | 50 |
| TseI | GCWGC | 2 cut(s) | 67, 170 |
| TspRI | CASTG | 1 cut(s) | 50 |