breast cancer carboxy-terminal domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0327531 |
| rosa_rugosa | Rorug01G0068100 |
| rosa_samantha | Rh1BG067400 Rh1DG089400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 194 |
| AfaI | GTAC | 1 cut(s) | 77 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 204 |
| AgsI | TTSAA | 2 cut(s) | 62, 260 |
| AluBI | AGCT | 1 cut(s) | 188 |
| AluI | AGCT | 1 cut(s) | 188 |
| Alw26I | GTCTC | 1 cut(s) | 130 |
| AspLEI | GCGC | 1 cut(s) | 149 |
| AspS9I | GGNCC | 2 cut(s) | 128, 251 |
| AvaII | GGWCC | 2 cut(s) | 128, 251 |
| BceAI | ACGGC | 1 cut(s) | 200 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 60, 94 |
| BciVI | GTATCC | 1 cut(s) | 41 |
| BcoDI | GTCTC | 1 cut(s) | 130 |
| BfaI | CTAG | 2 cut(s) | 68, 158 |
| BfmI | CTRYAG | 1 cut(s) | 273 |
| BfuI | GTATCC | 1 cut(s) | 41 |
| Bme18I | GGWCC | 2 cut(s) | 128, 251 |
| BmgT120I | GGNCC | 2 cut(s) | 128, 251 |
| BmiI | GGNNCC | 1 cut(s) | 214 |
| BmsI | GCATC | 6 cut(s) | 55, 62, 182, 234, 239, 252 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 204 |
| Bse1I | ACTGG | 2 cut(s) | 253, 282 |
| Bse3DI | GCAATG | 1 cut(s) | 26 |
| BseGI | GGATG | 1 cut(s) | 53 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 204 |
| BseMI | GCAATG | 1 cut(s) | 26 |
| BseNI | ACTGG | 2 cut(s) | 253, 282 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 204 |
| BsmAI | GTCTC | 1 cut(s) | 130 |
| BspACI | CCGC | 1 cut(s) | 194 |
| BspLI | GGNNCC | 1 cut(s) | 214 |
| BsrDI | GCAATG | 1 cut(s) | 26 |
| BsrI | ACTGG | 2 cut(s) | 253, 282 |
| Bst4CI | ACNGT | 2 cut(s) | 264, 277 |
| Bst6I | CTCTTC | 1 cut(s) | 123 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 236 |
| BstC8I | GCNNGC | 3 cut(s) | 163, 223, 241 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 202 |
| BstF5I | GGATG | 1 cut(s) | 53 |
| BstHHI | GCGC | 1 cut(s) | 149 |
| BstMAI | GTCTC | 1 cut(s) | 130 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 227, 236 |
| BstNSI | RCATGY | 1 cut(s) | 225 |
| BstSFI | CTRYAG | 1 cut(s) | 273 |
| BsuI | GTATCC | 1 cut(s) | 41 |
| BtgZI | GCGATG | 1 cut(s) | 211 |
| BtsCI | GGATG | 1 cut(s) | 53 |
| BtsIMutI | CAGTG | 3 cut(s) | 246, 282, 289 |
| Cac8I | GCNNGC | 3 cut(s) | 163, 223, 241 |
| CfoI | GCGC | 1 cut(s) | 149 |
| Cfr13I | GGNCC | 2 cut(s) | 128, 251 |
| Csp6I | GTAC | 1 cut(s) | 76 |
| CviAII | CATG | 3 cut(s) | 43, 222, 291 |
| CviJI | RGCY | 2 cut(s) | 188, 215 |
| CviKI_1 | RGCY | 2 cut(s) | 188, 215 |
| CviQI | GTAC | 1 cut(s) | 76 |
| Eam1104I | CTCTTC | 1 cut(s) | 123 |
| EarI | CTCTTC | 1 cut(s) | 123 |
| Eco47I | GGWCC | 2 cut(s) | 128, 251 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 202 |
| EcoT22I | ATGCAT | 2 cut(s) | 48, 227 |
| FaeI | CATG | 3 cut(s) | 46, 225, 294 |
| FaiI | YATR | 5 cut(s) | 17, 28, 44, 223, 292 |
| FatI | CATG | 3 cut(s) | 42, 221, 290 |
| FauI | CCCGC | 1 cut(s) | 201 |
| FokI | GGATG | 1 cut(s) | 40 |
| FspBI | CTAG | 2 cut(s) | 68, 158 |
| GlaI | GCGC | 1 cut(s) | 148 |
| HhaI | GCGC | 1 cut(s) | 149 |
| Hin1II | CATG | 3 cut(s) | 46, 225, 294 |
| Hin6I | GCGC | 1 cut(s) | 147 |
| HinP1I | GCGC | 1 cut(s) | 147 |
| HpyCH4III | ACNGT | 2 cut(s) | 264, 277 |
| HpyCH4V | TGCA | 9 cut(s) | 4, 19, 46, 53, 173, 203, 221, 225, 290 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 227, 236 |
| Hsp92II | CATG | 3 cut(s) | 46, 225, 294 |
| HspAI | GCGC | 1 cut(s) | 147 |
| LmnI | GCTCC | 1 cut(s) | 212 |
| LweI | GCATC | 6 cut(s) | 55, 62, 182, 234, 239, 252 |
| MaeI | CTAG | 2 cut(s) | 68, 158 |
| MaeIII | GTNAC | 1 cut(s) | 277 |
| MboII | GAAGA | 2 cut(s) | 110, 168 |
| MluCI | AATT | 1 cut(s) | 255 |
| MnlI | CCTC | 1 cut(s) | 103 |
| Mph1103I | ATGCAT | 2 cut(s) | 48, 227 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 227, 236 |
| NlaIII | CATG | 3 cut(s) | 46, 225, 294 |
| NlaIV | GGNNCC | 1 cut(s) | 214 |
| NmuCI | GTSAC | 1 cut(s) | 277 |
| NsiI | ATGCAT | 2 cut(s) | 48, 227 |
| NspI | RCATGY | 1 cut(s) | 225 |
| PaeI | GCATGC | 1 cut(s) | 225 |
| PspN4I | GGNNCC | 1 cut(s) | 214 |
| PspPI | GGNCC | 2 cut(s) | 128, 251 |
| RsaI | GTAC | 1 cut(s) | 77 |
| RsaNI | GTAC | 1 cut(s) | 76 |
| Sau96I | GGNCC | 2 cut(s) | 128, 251 |
| SetI | ASST | 3 cut(s) | 77, 159, 190 |
| SfaNI | GCATC | 6 cut(s) | 55, 62, 182, 234, 239, 252 |
| SfcI | CTRYAG | 1 cut(s) | 273 |
| SinI | GGWCC | 2 cut(s) | 128, 251 |
| SphI | GCATGC | 1 cut(s) | 225 |
| Sse9I | AATT | 1 cut(s) | 255 |
| SsiI | CCGC | 1 cut(s) | 194 |
| SspMI | CTAG | 2 cut(s) | 68, 158 |
| TaaI | ACNGT | 2 cut(s) | 264, 277 |
| TasI | AATT | 1 cut(s) | 255 |
| TscAI | CASTG | 3 cut(s) | 253, 282, 289 |
| TseFI | GTSAC | 1 cut(s) | 277 |
| Tsp45I | GTSAC | 1 cut(s) | 277 |
| TspRI | CASTG | 3 cut(s) | 253, 282, 289 |
| VpaK11BI | GGWCC | 2 cut(s) | 128, 251 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 202 |
| XceI | RCATGY | 1 cut(s) | 225 |
| XspI | CTAG | 2 cut(s) | 68, 158 |
| Zsp2I | ATGCAT | 2 cut(s) | 48, 227 |