Ran guanine nucleotide release
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0352451 |
| rosa_roxburghii | Rroxscaffold_3G00255850 |
| rosa_rugosa | Rorug07G0061400 |
| rosa_samantha | Rh7BG190300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 118 |
| AcsI | RAATTY | 1 cut(s) | 11 |
| AjnI | CCWGG | 1 cut(s) | 85 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| ApoI | RAATTY | 1 cut(s) | 11 |
| AspS9I | GGNCC | 1 cut(s) | 196 |
| AsuHPI | GGTGA | 1 cut(s) | 67 |
| AvaII | GGWCC | 1 cut(s) | 196 |
| BbvCI | CCTCAGC | 1 cut(s) | 42 |
| BccI | CCATC | 1 cut(s) | 142 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 125, 159 |
| BciT130I | CCWGG | 1 cut(s) | 87 |
| BfuAI | ACCTGC | 1 cut(s) | 118 |
| Bme1390I | CCNGG | 1 cut(s) | 87 |
| Bme18I | GGWCC | 1 cut(s) | 196 |
| BmgT120I | GGNCC | 1 cut(s) | 196 |
| BmiI | GGNNCC | 1 cut(s) | 84 |
| BmrFI | CCNGG | 1 cut(s) | 87 |
| Bpu10I | CCTNAGC | 1 cut(s) | 42 |
| BseBI | CCWGG | 1 cut(s) | 87 |
| BseMII | CTCAG | 2 cut(s) | 33, 41 |
| BseYI | CCCAGC | 1 cut(s) | 167 |
| BspCNI | CTCAG | 2 cut(s) | 34, 40 |
| BspLI | GGNNCC | 1 cut(s) | 84 |
| BspMI | ACCTGC | 1 cut(s) | 118 |
| Bst2UI | CCWGG | 1 cut(s) | 87 |
| BstDEI | CTNAG | 2 cut(s) | 27, 42 |
| BstNI | CCWGG | 1 cut(s) | 87 |
| BstSCI | CCNGG | 1 cut(s) | 85 |
| BtgZI | GCGATG | 1 cut(s) | 161 |
| BveI | ACCTGC | 1 cut(s) | 118 |
| Cfr13I | GGNCC | 1 cut(s) | 196 |
| CviJI | RGCY | 3 cut(s) | 31, 41, 206 |
| CviKI_1 | RGCY | 3 cut(s) | 31, 41, 206 |
| DdeI | CTNAG | 2 cut(s) | 27, 42 |
| Eco47I | GGWCC | 1 cut(s) | 196 |
| EcoRII | CCWGG | 1 cut(s) | 85 |
| FaiI | YATR | 3 cut(s) | 94, 107, 201 |
| GsaI | CCCAGC | 1 cut(s) | 171 |
| HindIII | AAGCTT | 1 cut(s) | 204 |
| HinfI | GANTC | 1 cut(s) | 23 |
| HphI | GGTGA | 1 cut(s) | 67 |
| Hpy188III | TCNNGA | 1 cut(s) | 69 |
| HpyCH4V | TGCA | 1 cut(s) | 128 |
| HpyF3I | CTNAG | 2 cut(s) | 27, 42 |
| LpnPI | CCDG | 4 cut(s) | 72, 99, 123, 153 |
| MaeIII | GTNAC | 2 cut(s) | 95, 118 |
| MfeI | CAATTG | 1 cut(s) | 129 |
| MluCI | AATT | 2 cut(s) | 11, 129 |
| MnlI | CCTC | 5 cut(s) | 10, 31, 37, 73, 148 |
| MspR9I | CCNGG | 1 cut(s) | 87 |
| MunI | CAATTG | 1 cut(s) | 129 |
| MvaI | CCWGG | 1 cut(s) | 87 |
| NlaIV | GGNNCC | 1 cut(s) | 84 |
| PfeI | GAWTC | 1 cut(s) | 23 |
| PfoI | TCCNGGA | 1 cut(s) | 85 |
| Psp6I | CCWGG | 1 cut(s) | 85 |
| PspFI | CCCAGC | 1 cut(s) | 167 |
| PspGI | CCWGG | 1 cut(s) | 85 |
| PspN4I | GGNNCC | 1 cut(s) | 84 |
| PspPI | GGNCC | 1 cut(s) | 196 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 66, 98 |
| Sau96I | GGNCC | 1 cut(s) | 196 |
| ScrFI | CCNGG | 1 cut(s) | 87 |
| SetI | ASST | 4 cut(s) | 84, 112, 159, 208 |
| SgeI | CNNG | 7 cut(s) | 81, 98, 99, 122, 166, 180, 199 |
| SinI | GGWCC | 1 cut(s) | 196 |
| Sse9I | AATT | 2 cut(s) | 11, 129 |
| StyD4I | CCNGG | 1 cut(s) | 85 |
| TasI | AATT | 2 cut(s) | 11, 129 |
| TfiI | GAWTC | 1 cut(s) | 23 |
| VpaK11BI | GGWCC | 1 cut(s) | 196 |
| XapI | RAATTY | 1 cut(s) | 11 |