U4 U6.U5 tri-snRNP-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g26190 |
| rosa_chinensis | RchiOBHm_Chr1g0362531 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 99 |
| AgsI | TTSAA | 2 cut(s) | 171, 228 |
| AluBI | AGCT | 3 cut(s) | 124, 158, 166 |
| AluI | AGCT | 3 cut(s) | 124, 158, 166 |
| Ama87I | CYCGRG | 1 cut(s) | 125 |
| ApeKI | GCWGC | 1 cut(s) | 163 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 84 |
| AvaI | CYCGRG | 1 cut(s) | 125 |
| AxyI | CCTNAGG | 1 cut(s) | 90 |
| BbsI | GAAGAC | 1 cut(s) | 87 |
| BbvI | GCAGC | 1 cut(s) | 175 |
| BciVI | GTATCC | 1 cut(s) | 192 |
| BfuI | GTATCC | 1 cut(s) | 192 |
| BglII | AGATCT | 1 cut(s) | 174 |
| BisI | GCNGC | 1 cut(s) | 164 |
| BlsI | GCNGC | 1 cut(s) | 165 |
| BmeT110I | CYCGRG | 1 cut(s) | 125 |
| BpiI | GAAGAC | 1 cut(s) | 87 |
| Bse21I | CCTNAGG | 1 cut(s) | 90 |
| Bse3DI | GCAATG | 1 cut(s) | 8 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseMI | GCAATG | 1 cut(s) | 8 |
| BseMII | CTCAG | 1 cut(s) | 81 |
| BseRI | GAGGAG | 1 cut(s) | 143 |
| BseXI | GCAGC | 1 cut(s) | 175 |
| BsiHKCI | CYCGRG | 1 cut(s) | 125 |
| BsmI | GAATGC | 1 cut(s) | 145 |
| BsoBI | CYCGRG | 1 cut(s) | 125 |
| Bsp143I | GATC | 1 cut(s) | 174 |
| BspCNI | CTCAG | 1 cut(s) | 82 |
| BsrDI | GCAATG | 1 cut(s) | 8 |
| BssMI | GATC | 1 cut(s) | 174 |
| Bst4CI | ACNGT | 2 cut(s) | 204, 232 |
| Bst6I | CTCTTC | 1 cut(s) | 51 |
| BstDEI | CTNAG | 1 cut(s) | 90 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstKTI | GATC | 1 cut(s) | 177 |
| BstMBI | GATC | 1 cut(s) | 174 |
| BstV1I | GCAGC | 1 cut(s) | 175 |
| BstV2I | GAAGAC | 1 cut(s) | 87 |
| BstX2I | RGATCY | 1 cut(s) | 174 |
| BstYI | RGATCY | 1 cut(s) | 174 |
| Bsu36I | CCTNAGG | 1 cut(s) | 90 |
| BsuI | GTATCC | 1 cut(s) | 192 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| CviAII | CATG | 1 cut(s) | 14 |
| CviJI | RGCY | 3 cut(s) | 124, 158, 166 |
| CviKI_1 | RGCY | 3 cut(s) | 124, 158, 166 |
| DdeI | CTNAG | 1 cut(s) | 90 |
| DpnI | GATC | 1 cut(s) | 176 |
| DpnII | GATC | 1 cut(s) | 174 |
| Eam1104I | CTCTTC | 1 cut(s) | 51 |
| EarI | CTCTTC | 1 cut(s) | 51 |
| Eco57I | CTGAAG | 1 cut(s) | 99 |
| Eco81I | CCTNAGG | 1 cut(s) | 90 |
| Eco88I | CYCGRG | 1 cut(s) | 125 |
| EcoT22I | ATGCAT | 1 cut(s) | 10 |
| FaeI | CATG | 1 cut(s) | 17 |
| FaiI | YATR | 2 cut(s) | 15, 222 |
| FatI | CATG | 1 cut(s) | 13 |
| Fnu4HI | GCNGC | 1 cut(s) | 164 |
| FokI | GGATG | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 1 cut(s) | 164 |
| GluI | GCNGC | 1 cut(s) | 164 |
| Hin1II | CATG | 1 cut(s) | 17 |
| HindIII | AAGCTT | 1 cut(s) | 156 |
| HinfI | GANTC | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 1 cut(s) | 47 |
| Hpy188III | TCNNGA | 1 cut(s) | 89 |
| HpyAV | CCTTC | 1 cut(s) | 46 |
| HpyCH4III | ACNGT | 2 cut(s) | 204, 232 |
| HpyCH4V | TGCA | 3 cut(s) | 8, 13, 163 |
| HpyF3I | CTNAG | 1 cut(s) | 90 |
| Hsp92II | CATG | 1 cut(s) | 17 |
| Kzo9I | GATC | 1 cut(s) | 174 |
| LpnPI | CCDG | 2 cut(s) | 102, 173 |
| Lsp1109I | GCAGC | 1 cut(s) | 175 |
| MalI | GATC | 1 cut(s) | 176 |
| MboI | GATC | 1 cut(s) | 174 |
| MboII | GAAGA | 3 cut(s) | 68, 82, 92 |
| MflI | RGATCY | 1 cut(s) | 174 |
| MlyI | GAGTC | 1 cut(s) | 124 |
| MmeI | TCCRAC | 1 cut(s) | 176 |
| MnlI | CCTC | 4 cut(s) | 54, 85, 121, 175 |
| Mph1103I | ATGCAT | 1 cut(s) | 10 |
| MroXI | GAANNNNTTC | 1 cut(s) | 84 |
| MseI | TTAA | 4 cut(s) | 65, 98, 108, 244 |
| MslI | CAYNNNNRTG | 1 cut(s) | 219 |
| Mva1269I | GAATGC | 1 cut(s) | 145 |
| NdeII | GATC | 1 cut(s) | 174 |
| NlaIII | CATG | 1 cut(s) | 17 |
| NsiI | ATGCAT | 1 cut(s) | 10 |
| PaeR7I | CTCGAG | 1 cut(s) | 125 |
| PctI | GAATGC | 1 cut(s) | 145 |
| PdmI | GAANNNNTTC | 1 cut(s) | 84 |
| PkrI | GCNGC | 1 cut(s) | 165 |
| PleI | GAGTC | 1 cut(s) | 123 |
| PpsI | GAGTC | 1 cut(s) | 123 |
| PspXI | VCTCGAGB | 1 cut(s) | 125 |
| PsuI | RGATCY | 1 cut(s) | 174 |
| RseI | CAYNNNNRTG | 1 cut(s) | 219 |
| SaqAI | TTAA | 4 cut(s) | 65, 98, 108, 244 |
| SatI | GCNGC | 1 cut(s) | 164 |
| Sau3AI | GATC | 1 cut(s) | 174 |
| SchI | GAGTC | 1 cut(s) | 124 |
| SetI | ASST | 6 cut(s) | 65, 96, 126, 160, 168, 192 |
| Sfr274I | CTCGAG | 1 cut(s) | 125 |
| SgeI | CNNG | 6 cut(s) | 26, 101, 114, 137, 139, 200 |
| SlaI | CTCGAG | 1 cut(s) | 125 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 219 |
| SmlI | CTYRAG | 1 cut(s) | 125 |
| SmoI | CTYRAG | 1 cut(s) | 125 |
| TaaI | ACNGT | 2 cut(s) | 204, 232 |
| TaqI | TCGA | 1 cut(s) | 126 |
| Tru1I | TTAA | 4 cut(s) | 65, 98, 108, 244 |
| Tru9I | TTAA | 4 cut(s) | 65, 98, 108, 244 |
| TseI | GCWGC | 1 cut(s) | 163 |
| XhoI | CTCGAG | 1 cut(s) | 125 |
| XmnI | GAANNNNTTC | 1 cut(s) | 84 |
| Zsp2I | ATGCAT | 1 cut(s) | 10 |