RchiOBHm_Chr1g0371841

Adenine guanine permease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0014608
Physical Location & Seq
Reverse (-)
60818427 .. 60820460
2034 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1743 bp
ATGGTCATGGAGGCTCCTCCGCCGGCTGCGAAGCCCAGCCACTTAACTCGGCTCAACACCTACGTCGCCAAGAGCCGCGTTGGCAAGCGCTTCAAACTCACCGAGCGAAACTCAACCTTCACCACCGAGCTCCGGGCCGGTACCGCCACGTTTCTCACCATGGCATACATCCTCGCCGTCAACGCCTCCATCCTCACCGACTCCGGCGGCACCTGCTCCGTCTCGGACTGCATCCCTCTCTGCTCCGACTCCTCCCTCTCCGTCAACAACTGCACTGGAACAGTCATCCAACCCGATGCGTCATGCAAATTCGATCCGGTCAACCCCGGCTACACGGCCTGCCTTGACCGCGTCCGGAAAGACCTCATCGTTGCCACCGTGGCCTCCTCCCTCATCGGTTGCGTAATCATGGGCGCATTCGCCAACCTGCCTCTCGCCTTGGCCCCGGGAATGGGCACCAACGCTTACTTCGCCTACACCGTCGTCGGGTTTCACGGATCAGGCAACGTCTCATACCAGAGCGCCTTGGCAGCCGTTTTCATGGAAGGTCTTATTTTCCTCTTAATTTCCGCGATTGGACTCCGCGCTCAACTCGCCAAATTGATCCCCAAACCCGTCCGGATCAGCTCCTCCGCAGGCATCGGCCTCTTCCTCGCCTTCATCGGCCTGCAGTCCAACCAGGGAATCGGACTCGTCGGCTACAGCTCCTCCACTCTCGTCACCATCGGAGCCTGCCCCGCCTCCAAGCGCGTGTCGCTGGCGCCCGTAGTAACTGCCGCGAACGGCACCGTCAGCCTGCTGGCTGGCGGCACGGTCTCGGGTGACATATTCTGCACGCAAGGCCGCATGGAGAGCCCCACATTCTGGCTAGGGATAGTCGGCTTCGTCATCATCGCCTACTGCCTCGTCAAAAACATCAAGGGCGCCATGATCTACGGCATCGTCTTCGTCACGGCCGTCTCGTGGTTCCGTAACACAGAAGTAACGGCGTTCCCCCACACTGCCGCAGGCGACGCCGCCTACGAGTATTTCAAAAAAGTCTTCGACGTACATACGATCCAATCCACGGCGGGGGCCCTCAGCTTCAAGAGCTTCGGCAAAGGGTATTTCTGGGAAGCCCTAATTACGTTCCTCTACGTAGACATACTGGACACGACGGGTACCCTATACTCCATGGCCCGTTTCGCAGGGTTCATGGACCAGGACGGTAATTTCGAAGGTCAATACTTCGCCTTCATGTCCGACGCCACGTCGATCGTGGTGGGGTCCTTGCTTGGCACGTCACCGGTGACGACGTTTATCGAGTCATCGACGGGGATAAGAGAAGGCGGGAGGACGGGACTGACGGCGCTGACGGCTGCGGGCTACTTTTTCTTTGCGTTATTCTTCACGCCGTTATTGGCTTCCATTCCGGCTTGGGCGGTGGGCCCGCCGCTGATATTAGTCGGCGTGCTGATGATGAAGTCGGTGGTGGAGATAGAGTGGGATGATATGAGGCAGGCGATTCCGGCGTTTGTGACTTTGATACTGATGCCGTTGACTTACTCAATAGCCTATGGTTTGATTGGTGGCATTGGGACCTTTATTGTTCTGCACCTGTGGGATTGGAGCAGAGAACTTTTGGTCAAGCTGGGAGTTTTGAAAGGTGAACAAGAGGAAGAAGAAGCTGTTGGGTCCAACGGGGTGGTGCATGATCATTCCAAAGAAGACCAAGCTTCAAAAGTACTTGAGCTTGAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0005345 GO:0006810 GO:0006863 GO:0008150 GO:0015205 GO:0015851 GO:0015853 GO:0015854 GO:0022857 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0072530 GO:1904823
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Xan_ur_permease

Protein Analysis

580

Amino Acids

61.68

Weight (kDa)

5.87

Isoelectric Point (pI)

29.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Xan_ur_permease PF00860 119 - 520 2e-26 Permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014608)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G10960
fragaria_vesca FvH4_7g25660
malus_domestica MD01G1163900.v1.1 MD07G1231600.v1.1
prunus_persica Prupe.2G261700_v2.0.a1
pyrus_communis pycom01g17830 pycom07g20940
rosa_chinensis RchiOBHm_Chr1g0371841
rosa_laevigata RLG00000026939
rosa_multiflora Rmu_sc0001755.1_g000048
rosa_roxburghii Rroxscaffold_4G00285410
rosa_rugosa Rorug01G0366700
rosa_samantha Rh1AG376700 Rh1BG340000 Rh1CG353000 Rh1DG371000
rosa_wichuraiana Rw1G033140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 221
Acc36I ACCTGC 2 cut(s) 221, 435
Acc65I GGTACC 2 cut(s) 140, 1160
AccB1I GGYRCC 7 cut(s) 140, 209, 455, 760, 785, 923, 1160
AccB7I CCANNNNNTGG 1 cut(s) 864
AccI GTMKAC 1 cut(s) 1140
AccII CGCG 6 cut(s) 78, 351, 572, 585, 750, 779
AccIII TCCGGA 2 cut(s) 354, 618
AclWI GGATC 5 cut(s) 308, 505, 598, 629, 1051
AcoI YGGCCR 1 cut(s) 954
AcsI RAATTY 1 cut(s) 308
AcyI GRCGYC 4 cut(s) 761, 924, 1014, 1245
AfaI GTAC 4 cut(s) 142, 1050, 1162, 1725
AfeI AGCGCT 1 cut(s) 89
AfiI CCNNNNNNNGG 8 cut(s) 132, 451, 452, 486, 864, 963, 1066, 1071
AgeI ACCGGT 1 cut(s) 1285
AgsI TTSAA 6 cut(s) 94, 1033, 1087, 1642, 1719, 1736
AhdI GACNNNNNGTC 1 cut(s) 1249
AjiI CACGTC 2 cut(s) 1251, 1281
AjnI CCWGG 2 cut(s) 678, 1200
AjuI GAANNNNNNNTTGG 4 cut(s) 452, 484, 1653, 1685
AluBI AGCT 9 cut(s) 130, 627, 705, 1083, 1092, 1630, 1667, 1715, 1732
AluI AGCT 9 cut(s) 130, 627, 705, 1083, 1092, 1630, 1667, 1715, 1732
Alw21I GWGCWC 1 cut(s) 132
Alw26I GTCTC 4 cut(s) 226, 514, 820, 964
AlwI GGATC 5 cut(s) 308, 505, 598, 629, 1051
Ama87I CYCGRG 2 cut(s) 445, 817
Aor13HI TCCGGA 2 cut(s) 354, 618
Aor51HI AGCGCT 1 cut(s) 89
ApaI GGGCCC 2 cut(s) 1078, 1430
ApeKI GCWGC 3 cut(s) 26, 530, 1358
ApoI RAATTY 1 cut(s) 308
ArsI GACNNNNNNTTYG 2 cut(s) 1196, 1228
AsiGI ACCGGT 1 cut(s) 1285
Asp718I GGTACC 2 cut(s) 140, 1160
AspLEI GCGC 8 cut(s) 90, 416, 524, 587, 750, 763, 926, 1351
AsuC2I CCSGG 4 cut(s) 134, 327, 446, 447
AsuHPI GGTGA 9 cut(s) 91, 112, 148, 187, 712, 833, 1275, 1300, 1658
AsuII TTCGAA 1 cut(s) 1215
AvaI CYCGRG 2 cut(s) 445, 817
AvaII GGWCC 4 cut(s) 1198, 1266, 1578, 1674
BaeGI GKGCMC 3 cut(s) 458, 1078, 1430
BanI GGYRCC 7 cut(s) 140, 209, 455, 760, 785, 923, 1160
BanII GRGCYC 4 cut(s) 132, 857, 1078, 1430
BauI CACGAG 1 cut(s) 961
BbsI GAAGAC 3 cut(s) 937, 1033, 1713
Bbv12I GWGCWC 1 cut(s) 132
BbvCI CCTCAGC 1 cut(s) 1079
BbvI GCAGC 3 cut(s) 13, 542, 1345
BccI CCATC 2 cut(s) 197, 731
BcgI CGANNNNNNTGC 2 cut(s) 928, 962
BciT130I CCWGG 2 cut(s) 680, 1202
BclI TGATCA 1 cut(s) 1693
BcnI CCSGG 4 cut(s) 134, 327, 446, 447
BcoDI GTCTC 4 cut(s) 226, 514, 820, 964
BfaI CTAG 1 cut(s) 869
BfmI CTRYAG 2 cut(s) 668, 700
BfoI RGCGCY 5 cut(s) 91, 525, 764, 927, 1352
BfuAI ACCTGC 2 cut(s) 221, 435
BglI GCCNNNNNGGC 2 cut(s) 81, 380
BmcAI AGTACT 1 cut(s) 1725
Bme1390I CCNGG 6 cut(s) 134, 327, 446, 447, 680, 1202
Bme18I GGWCC 4 cut(s) 1198, 1266, 1578, 1674
BmeRI GACNNNNNGTC 1 cut(s) 1249
BmeT110I CYCGRG 2 cut(s) 445, 817
BmgBI CACGTC 2 cut(s) 1251, 1281
BmrFI CCNGG 6 cut(s) 134, 327, 446, 447, 680, 1202
BmsI GCATC 5 cut(s) 240, 286, 648, 948, 1521
BpiI GAAGAC 3 cut(s) 937, 1033, 1713
BplI GAGNNNNNCTC 2 cut(s) 95, 127
Bpu10I CCTNAGC 1 cut(s) 1079
Bpu14I TTCGAA 1 cut(s) 1215
BpuMI CCSGG 4 cut(s) 134, 327, 446, 447
BsaAI YACGTR 1 cut(s) 1138
BsaHI GRCGYC 4 cut(s) 761, 924, 1014, 1245
BsaI GGTCTC 1 cut(s) 820
BsaWI WCCGGW 4 cut(s) 316, 354, 618, 1285
BsaXI ACNNNNNCTCC 4 cut(s) 692, 722, 1466, 1496
Bsc4I CCNNNNNNNGG 8 cut(s) 132, 451, 452, 486, 864, 963, 1066, 1071
Bse118I RCCGGY 3 cut(s) 22, 137, 1285
Bse1I ACTGG 2 cut(s) 280, 1152
BseAI TCCGGA 2 cut(s) 354, 618
BseBI CCWGG 2 cut(s) 680, 1202
BseGI GGATG 5 cut(s) 168, 189, 231, 285, 1492
BseLI CCNNNNNNNGG 8 cut(s) 132, 451, 452, 486, 864, 963, 1066, 1071
BseMII CTCAG 1 cut(s) 1093
BseNI ACTGG 2 cut(s) 280, 1152
BseRI GAGGAG 5 cut(s) 6, 241, 376, 619, 697
BseSI GKGCMC 3 cut(s) 458, 1078, 1430
BseX3I CGGCCG 1 cut(s) 954
BseXI GCAGC 3 cut(s) 13, 542, 1345
BseYI CCCAGC 2 cut(s) 35, 1630
BsgI GTGCAG 3 cut(s) 256, 817, 1577
Bsh1236I CGCG 6 cut(s) 78, 351, 572, 585, 750, 779
Bsh1285I CGRYCG 2 cut(s) 957, 1257
BshNI GGYRCC 7 cut(s) 140, 209, 455, 760, 785, 923, 1160
BshTI ACCGGT 1 cut(s) 1285
BsiEI CGRYCG 2 cut(s) 957, 1257
BsiHKAI GWGCWC 1 cut(s) 132
BsiHKCI CYCGRG 2 cut(s) 445, 817
BslFI GGGAC 2 cut(s) 1353, 1591
BslI CCNNNNNNNGG 8 cut(s) 132, 451, 452, 486, 864, 963, 1066, 1071
BsmAI GTCTC 4 cut(s) 226, 514, 820, 964
BsmBI CGTCTC 3 cut(s) 226, 514, 964
BsmFI GGGAC 2 cut(s) 1353, 1591
BsmI GAATGC 1 cut(s) 416
Bso31I GGTCTC 1 cut(s) 820
BsoBI CYCGRG 2 cut(s) 445, 817
Bsp119I TTCGAA 1 cut(s) 1215
Bsp120I GGGCCC 2 cut(s) 1074, 1426
Bsp1286I GDGCHC 5 cut(s) 132, 458, 857, 1078, 1430
Bsp13I TCCGGA 2 cut(s) 354, 618
Bsp143I GATC 8 cut(s) 313, 497, 603, 621, 930, 1056, 1254, 1693
Bsp19I CCATGG 2 cut(s) 159, 1173
BspCNI CTCAG 1 cut(s) 1092
BspEI TCCGGA 2 cut(s) 354, 618
BspFNI CGCG 6 cut(s) 78, 351, 572, 585, 750, 779
BspMAI CTGCAG 1 cut(s) 672
BspMI ACCTGC 2 cut(s) 221, 435
BspPI GGATC 5 cut(s) 308, 505, 598, 629, 1051
BspT104I TTCGAA 1 cut(s) 1215
BspT107I GGYRCC 7 cut(s) 140, 209, 455, 760, 785, 923, 1160
BspTNI GGTCTC 1 cut(s) 820
BsrFI RCCGGY 3 cut(s) 22, 137, 1285
BsrI ACTGG 2 cut(s) 280, 1152
BssAI RCCGGY 3 cut(s) 22, 137, 1285
BssMI GATC 8 cut(s) 313, 497, 603, 621, 930, 1056, 1254, 1693
BssNI GRCGYC 4 cut(s) 761, 924, 1014, 1245
BssSI CACGAG 1 cut(s) 961
BssT1I CCWWGG 4 cut(s) 159, 438, 525, 1173
Bst2BI CACGAG 1 cut(s) 961
Bst2UI CCWGG 2 cut(s) 680, 1202
Bst4CI ACNGT 6 cut(s) 283, 379, 481, 790, 814, 1208
Bst6I CTCTTC 1 cut(s) 653
BstACI GRCGYC 4 cut(s) 761, 924, 1014, 1245
BstBAI YACGTR 1 cut(s) 1138
BstBI TTCGAA 1 cut(s) 1215
BstDEI CTNAG 1 cut(s) 1079
BstDSI CCRYGG 4 cut(s) 159, 378, 1065, 1173
BstF5I GGATG 5 cut(s) 168, 189, 231, 285, 1492
BstFNI CGCG 6 cut(s) 78, 351, 572, 585, 750, 779
BstH2I RGCGCY 5 cut(s) 91, 525, 764, 927, 1352
BstHHI GCGC 8 cut(s) 90, 416, 524, 587, 750, 763, 926, 1351
BstKTI GATC 8 cut(s) 316, 500, 606, 624, 933, 1059, 1257, 1696
BstMAI GTCTC 4 cut(s) 226, 514, 820, 964
BstMBI GATC 8 cut(s) 313, 497, 603, 621, 930, 1056, 1254, 1693
BstMCI CGRYCG 2 cut(s) 957, 1257
BstNI CCWGG 2 cut(s) 680, 1202
BstSCI CCNGG 6 cut(s) 132, 325, 444, 445, 678, 1200
BstSFI CTRYAG 2 cut(s) 668, 700
BstSLI GKGCMC 3 cut(s) 458, 1078, 1430
BstSNI TACGTA 1 cut(s) 1138
BstUI CGCG 6 cut(s) 78, 351, 572, 585, 750, 779
BstV1I GCAGC 3 cut(s) 13, 542, 1345
BstV2I GAAGAC 3 cut(s) 937, 1033, 1713
BstXI CCANNNNNNTGG 1 cut(s) 1684
BstZI CGGCCG 1 cut(s) 954
BtgI CCRYGG 4 cut(s) 159, 378, 1065, 1173
BtgZI GCGATG 1 cut(s) 877
BtrI CACGTC 2 cut(s) 1251, 1281
BtsCI GGATG 5 cut(s) 168, 189, 231, 285, 1492
BtsI GCAGTG 1 cut(s) 999
BtsIMutI CAGTG 2 cut(s) 273, 999
BveI ACCTGC 2 cut(s) 221, 435
CfoI GCGC 8 cut(s) 90, 416, 524, 587, 750, 763, 926, 1351
Cfr10I RCCGGY 3 cut(s) 22, 137, 1285
Cfr9I CCCGGG 1 cut(s) 445
CseI GACGC 4 cut(s) 288, 340, 1022, 1253
Csp6I GTAC 4 cut(s) 141, 1049, 1161, 1724
CspAI ACCGGT 1 cut(s) 1285
CviQI GTAC 4 cut(s) 141, 1049, 1161, 1724
DdeI CTNAG 1 cut(s) 1079
DinI GGCGCC 2 cut(s) 762, 925
DpnI GATC 8 cut(s) 315, 499, 605, 623, 932, 1058, 1256, 1695
DpnII GATC 8 cut(s) 313, 497, 603, 621, 930, 1056, 1254, 1693
DriI GACNNNNNGTC 1 cut(s) 1249
EaeI YGGCCR 1 cut(s) 954
EagI CGGCCG 1 cut(s) 954
Eam1104I CTCTTC 1 cut(s) 653
Eam1105I GACNNNNNGTC 1 cut(s) 1249
EarI CTCTTC 1 cut(s) 653
EciI GGCGGA 1 cut(s) 9
Ecl136II GAGCTC 1 cut(s) 130
EclXI CGGCCG 1 cut(s) 954
Eco105I TACGTA 1 cut(s) 1138
Eco130I CCWWGG 4 cut(s) 159, 438, 525, 1173
Eco24I GRGCYC 4 cut(s) 132, 857, 1078, 1430
Eco31I GGTCTC 1 cut(s) 820
Eco47I GGWCC 4 cut(s) 1198, 1266, 1578, 1674
Eco47III AGCGCT 1 cut(s) 89
Eco52I CGGCCG 1 cut(s) 954
Eco53kI GAGCTC 1 cut(s) 130
Eco88I CYCGRG 2 cut(s) 445, 817
EcoICRI GAGCTC 1 cut(s) 130
EcoO109I RGGNCCY 4 cut(s) 1074, 1075, 1266, 1578
EcoRII CCWGG 2 cut(s) 678, 1200
EcoT14I CCWWGG 4 cut(s) 159, 438, 525, 1173
EcoT38I GRGCYC 4 cut(s) 132, 857, 1078, 1430
EgeI GGCGCC 2 cut(s) 762, 925
EheI GGCGCC 2 cut(s) 762, 925
ErhI CCWWGG 4 cut(s) 159, 438, 525, 1173
Esp3I CGTCTC 3 cut(s) 226, 514, 964
FaqI GGGAC 2 cut(s) 1353, 1591
FauI CCCGC 5 cut(s) 745, 1063, 1322, 1354, 1437
FbaI TGATCA 1 cut(s) 1693
FblI GTMKAC 1 cut(s) 1140
FokI GGATG 5 cut(s) 155, 176, 218, 272, 1499
FriOI GRGCYC 4 cut(s) 132, 857, 1078, 1430
FspBI CTAG 1 cut(s) 869
GlaI GCGC 8 cut(s) 89, 415, 523, 586, 749, 762, 925, 1350
GsaI CCCAGC 2 cut(s) 39, 1634
HaeII RGCGCY 5 cut(s) 91, 525, 764, 927, 1352
HgaI GACGC 4 cut(s) 288, 340, 1022, 1253
HhaI GCGC 8 cut(s) 90, 416, 524, 587, 750, 763, 926, 1351
Hin1I GRCGYC 4 cut(s) 761, 924, 1014, 1245
Hin6I GCGC 8 cut(s) 88, 414, 522, 585, 748, 761, 924, 1349
HinP1I GCGC 8 cut(s) 88, 414, 522, 585, 748, 761, 924, 1349
HincII GTYRAC 4 cut(s) 181, 265, 322, 1539
HindII GTYRAC 4 cut(s) 181, 265, 322, 1539
HindIII AAGCTT 1 cut(s) 1713
HinfI GANTC 7 cut(s) 200, 248, 579, 684, 690, 1304, 1504
HphI GGTGA 9 cut(s) 91, 112, 148, 187, 712, 833, 1275, 1300, 1658
Hpy166II GTNNAC 6 cut(s) 181, 265, 322, 1141, 1539, 1649
Hpy188I TCNGA 5 cut(s) 226, 247, 689, 728, 1243
Hpy188III TCNNGA 3 cut(s) 355, 619, 1087
Hpy8I GTNNAC 6 cut(s) 181, 265, 322, 1141, 1539, 1649
HpyAV CCTTC 6 cut(s) 127, 539, 667, 1211, 1243, 1319
HpyCH4III ACNGT 6 cut(s) 283, 379, 481, 790, 814, 1208
HpyCH4IV ACGT 9 cut(s) 63, 149, 507, 1047, 1127, 1137, 1250, 1280, 1295
HpyCH4V TGCA 7 cut(s) 231, 273, 306, 670, 834, 1594, 1690
HpyF3I CTNAG 1 cut(s) 1079
HpySE526I ACGT 9 cut(s) 63, 149, 507, 1047, 1127, 1137, 1250, 1280, 1295
Hsp92I GRCGYC 4 cut(s) 761, 924, 1014, 1245
HspAI GCGC 8 cut(s) 88, 414, 522, 585, 748, 761, 924, 1349
KasI GGCGCC 2 cut(s) 760, 923
Kpn2I TCCGGA 2 cut(s) 354, 618
KpnI GGTACC 2 cut(s) 144, 1164
KroI GCCGGC 1 cut(s) 22
KroNI GCCGGC 1 cut(s) 24
Ksp22I TGATCA 1 cut(s) 1693
Kzo9I GATC 8 cut(s) 313, 497, 603, 621, 930, 1056, 1254, 1693
LmnI GCTCC 8 cut(s) 19, 135, 221, 248, 632, 710, 728, 1608
Lsp1109I GCAGC 3 cut(s) 13, 542, 1345
LweI GCATC 5 cut(s) 240, 286, 648, 948, 1521
MaeI CTAG 1 cut(s) 869
MaeII ACGT 9 cut(s) 63, 149, 507, 1047, 1127, 1137, 1250, 1280, 1295
MaeIII GTNAC 9 cut(s) 718, 769, 821, 949, 971, 982, 1281, 1288, 1516
MalI GATC 8 cut(s) 315, 499, 605, 623, 932, 1058, 1256, 1695
MboI GATC 8 cut(s) 313, 497, 603, 621, 930, 1056, 1254, 1693
MboII GAAGA 7 cut(s) 640, 937, 1033, 1378, 1670, 1673, 1718
MhlI GDGCHC 5 cut(s) 132, 458, 857, 1078, 1430
MluCI AATT 5 cut(s) 308, 564, 599, 1122, 1210
Mly113I GGCGCC 2 cut(s) 761, 924
MlyI GAGTC 5 cut(s) 194, 242, 573, 684, 1313
MmeI TCCRAC 5 cut(s) 270, 313, 699, 1266, 1701
MroI TCCGGA 2 cut(s) 354, 618
MroNI GCCGGC 1 cut(s) 22
MseI TTAA 2 cut(s) 44, 563
MspA1I CMGCKG 1 cut(s) 1435
MspR9I CCNGG 6 cut(s) 134, 327, 446, 447, 680, 1202
Mva1269I GAATGC 1 cut(s) 416
MvaI CCWGG 2 cut(s) 680, 1202
MvnI CGCG 6 cut(s) 78, 351, 572, 585, 750, 779
NaeI GCCGGC 1 cut(s) 24
NarI GGCGCC 2 cut(s) 761, 924
NciI CCSGG 4 cut(s) 134, 327, 446, 447
NcoI CCATGG 2 cut(s) 159, 1173
NdeII GATC 8 cut(s) 313, 497, 603, 621, 930, 1056, 1254, 1693
NgoMIV GCCGGC 1 cut(s) 22
NmeAIII GCCGAG 1 cut(s) 28
NmuCI GTSAC 6 cut(s) 718, 821, 949, 1281, 1288, 1516
NspV TTCGAA 1 cut(s) 1215
PaqCI CACCTGC 1 cut(s) 221
PcsI WCGNNNNNNNCGW 6 cut(s) 375, 477, 954, 959, 1020, 1212
PctI GAATGC 1 cut(s) 416
PdiI GCCGGC 1 cut(s) 24
PfeI GAWTC 2 cut(s) 684, 1504
PflFI GACNNNGTC 1 cut(s) 350
PflMI CCANNNNNTGG 1 cut(s) 864
PinAI ACCGGT 1 cut(s) 1285
Ple19I CGATCG 1 cut(s) 1257
PleI GAGTC 5 cut(s) 194, 242, 573, 684, 1312
PluTI GGCGCC 2 cut(s) 764, 927
PpsI GAGTC 5 cut(s) 194, 242, 573, 684, 1312
Ppu21I YACGTR 1 cut(s) 1138
PpuMI RGGWCCY 2 cut(s) 1266, 1578
Psp124BI GAGCTC 1 cut(s) 132
Psp5II RGGWCCY 2 cut(s) 1266, 1578
Psp6I CCWGG 2 cut(s) 678, 1200
PspFI CCCAGC 2 cut(s) 35, 1630
PspGI CCWGG 2 cut(s) 678, 1200
PspOMI GGGCCC 2 cut(s) 1074, 1426
PspPPI RGGWCCY 2 cut(s) 1266, 1578
PstI CTGCAG 1 cut(s) 672
PsyI GACNNNGTC 1 cut(s) 350
PvuI CGATCG 1 cut(s) 1257
RsaI GTAC 4 cut(s) 142, 1050, 1162, 1725
RsaNI GTAC 4 cut(s) 141, 1049, 1161, 1724
SacI GAGCTC 1 cut(s) 132
SaqAI TTAA 2 cut(s) 44, 563
Sau3AI GATC 8 cut(s) 313, 497, 603, 621, 930, 1056, 1254, 1693
ScaI AGTACT 1 cut(s) 1725
SchI GAGTC 5 cut(s) 194, 242, 573, 684, 1313
ScrFI CCNGG 6 cut(s) 134, 327, 446, 447, 680, 1202
SduI GDGCHC 5 cut(s) 132, 458, 857, 1078, 1430
SfaNI GCATC 5 cut(s) 240, 286, 648, 948, 1521
SfcI CTRYAG 2 cut(s) 668, 700
SfoI GGCGCC 2 cut(s) 762, 925
SfuI TTCGAA 1 cut(s) 1215
SgrAI CRCCGGYG 1 cut(s) 1285
SinI GGWCC 4 cut(s) 1198, 1266, 1578, 1674
SmaI CCCGGG 1 cut(s) 447
SmlI CTYRAG 1 cut(s) 1727
SmoI CTYRAG 1 cut(s) 1727
SnaBI TACGTA 1 cut(s) 1138
Sse9I AATT 5 cut(s) 308, 564, 599, 1122, 1210
SspDI GGCGCC 2 cut(s) 760, 923
SspMI CTAG 1 cut(s) 869
SstI GAGCTC 1 cut(s) 132
StyD4I CCNGG 6 cut(s) 132, 325, 444, 445, 678, 1200
StyI CCWWGG 4 cut(s) 159, 438, 525, 1173
TaaI ACNGT 6 cut(s) 283, 379, 481, 790, 814, 1208
TaiI ACGT 9 cut(s) 66, 152, 510, 1050, 1130, 1140, 1253, 1283, 1298
TaqI TCGA 6 cut(s) 312, 1044, 1215, 1253, 1302, 1310
TasI AATT 5 cut(s) 308, 564, 599, 1122, 1210
TatI WGTACW 1 cut(s) 1723
TauI GCSGC 8 cut(s) 78, 210, 779, 810, 846, 1007, 1019, 1435
TfiI GAWTC 2 cut(s) 684, 1504
Tru1I TTAA 2 cut(s) 44, 563
Tru9I TTAA 2 cut(s) 44, 563
TscAI CASTG 2 cut(s) 280, 1006
TseFI GTSAC 6 cut(s) 718, 821, 949, 1281, 1288, 1516
TseI GCWGC 3 cut(s) 26, 530, 1358
Tsp45I GTSAC 6 cut(s) 718, 821, 949, 1281, 1288, 1516
TspDTI ATGAA 5 cut(s) 529, 649, 1183, 1225, 1475
TspGWI ACGGA 4 cut(s) 208, 250, 510, 959
TspMI CCCGGG 1 cut(s) 445
TspRI CASTG 2 cut(s) 280, 1006
Tth111I GACNNNGTC 1 cut(s) 350
Van91I CCANNNNNTGG 1 cut(s) 864
VpaK11BI GGWCC 4 cut(s) 1198, 1266, 1578, 1674
XapI RAATTY 1 cut(s) 308
XcmI CCANNNNNNNNNTGG 1 cut(s) 1255
XmaI CCCGGG 1 cut(s) 445
XmiI GTMKAC 1 cut(s) 1140
XspI CTAG 1 cut(s) 869
ZrmI AGTACT 1 cut(s) 1725
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.