RchiOBHm_Chr1g0379641

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0018085
Physical Location & Seq
Reverse (-)
65656715 .. 65659594
2880 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2118 bp
ATGGATTCGGATTTGGAAGGAATTGAGGCTAGGGAGAGTAGGCTGCGCAATGCTTATGAGAGTGCTCATGCTCAAGCTTCGTCGATTTTGCGGTTCACGGTGCAATGGAAGGAGCTTGAGGAGCATATTGAGTACACTAAGGGGTTGTTTAAGGCCCGATTTGAGGAGGTTCGGAACCGGGAGAGGGAGATTGGGGTGAAGGAGAAGGAGATGGCGGAGGAAGAGGTGAAGTTTAAGGCGGAGAGGGACTCGAAAGCGAAGGATTTGCATAGGATTCAGAGGATGGTTGAGGAGAAGCAGAAGGAGATTGATGGGATGGAGAAGCGGTTTTCAGAGGTGGAGGATTTGGTTAGGGAGAAGGAGCTGGATTGTAAGTTGGTTCGGAAATGTATTGAAGAGGGGCAGAGGAAGTTGGGTTCGGTGGAAGAGCAGATTCGGGTGAAGGGGATGCAGTTGAAGTATGTTCAGGGGTTGGTTGAGAAGCAATGGAAGGAGCATGATTTGAAAGAGGAGAAGATTCGGGCAATGGAGAAGAAAGAGAAGGATTTCAGTTTGCTTGAGAAGTCGATGGAGGAGTGGGCCGGTAGACATGAGGCAAAGGAGATGGAGCTTCGGAGATGGGTTGAGAAGCTTGAAGGACAGGAGAGAGAGGTTGGCTCTAAGATTGATGAAGTGAATTTGATTGATAAGAAGGTCCATGAATGCCTGAAAGAGGTTCAGTTGAAAGAACAGAAATTGTATTCCCTTGAAAAGTCACTACATGTACAATCGTGTGGACTTCAAAAGAAAGAGAGGGAGCTTGAAATCAAGCAAGAACAAGTTGATTTGGATGTGGTTCGAAAATCCACGAAAGTACACAGCCAGACTTTGAAATCGAAGGAGAATTCTCATCAATTGGAAGTTGAGGAATCAGAAGATACTATTCCTTCTGCTAACAATGGGAATCGGGATGGCAGAGGCTTGCAATTGTTAATGAACCAGCATTTGAGGAGGAATGATTTGATGCTTAAAGAAATCGACGATACTCTTCAAAGGTCATCAGATCCAGCTAAACTGTTGTTGGATGCAATGCATGGTTTTTACCCTTCATATTCGGCTGTGGAAAACAACAAGTTTGAGTTGACAGTTATTAGGAGGAGTTGTAATTTTTTGTTGAGGGAGTTAAAAAGAGTCTCTCCAAATATTACTCCTCAATTGAGAGGAGAAGCTATGACGTTAGCAGCTGAGTGGAAAGCTAAGATGCATACTGACAACTGGTTGGAGGTATTGGGTCTTTTGCTGCTTCTTGCTGCTTATGATTTGAGCTCTACTTATGATGTGAAGGAGCTTGAAAGTCTGGTTGGTATAGTTGCTCAGCACAACTATGACACAGCTGAATTATGCCTGGCTCTTGGTATTGGAGATAAGGCACCTGATCAGGACACACAGGGTCAAAGCACTTCAAAAAGAAATACAAGCAGCAACAATTGTTCCCCTGATAATAAAATTGAGAAACGTGCAGATTCTCCACTGGCCAATATTCAACAGACTACCACCACAAATACAGATTTACCGAATCTGCAGGTGTTACCAAATGAGCATTTGAGTACTGGGAATCCTTTGATGATTCCAGCTGTTACAGATGGTTCCTGTCAGTCATTAGTTGGTTTAGCAGGTAAAGTGGTTGCAGCAGGTTTGGTTCAGGAGCTTATTGCAAACAAGCAACTGCTTCAGGCCGTTGTGTTTAGTTGCACCCTCAAGTTAACTGACATGTTTCCCCCTGTGCCACTGTTAAAAGAATGTGCAGAGGGTGCGATAAGGAATGGCTCAAAGGCAGTAAAGGACCTGAAAGATGTGATTAGATGCATCAAAGATTACAACCTAGAGTCCGAATACCCATCCAAGGACATTGAATTGCAACTTCAGAAGCTGGAGAGCCTAATAGTGGATCGGGAAGCTGCATGTCTTGACGCCAAGCCAGTTAAACAACAAGCTAAGAAGAAAAGATGGAGGAAACGTGATAGCAGCACTTATGTCTCCGATTTTCAACCACCACAATCAGCGAAGAAGAAACACATCAAGTGTTACCATTGCAATGAGCTAGGGCATGTTCAGAGCAACTGTCCCCAAAGATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

705

Amino Acids

80.84

Weight (kDa)

6.35

Isoelectric Point (pI)

54.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 317 - 472 6.9e-29 Frigida-like protein
Frigida PF07899 557 - 645 1.3e-13 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g30690 FvH4_7g30690
rosa_chinensis RchiOBHm_Chr1g0379641
rosa_laevigata RLG00000026373
rosa_roxburghii Rroxscaffold_4G00279990
rosa_rugosa Rorug01G0413700
rosa_samantha Rh1AG437600 Rh1BG393700 Rh1CG406600 Rh1DG424600
rosa_wichuraiana Rw1G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1552
Acc16I TGCGCA 1 cut(s) 47
Acc36I ACCTGC 3 cut(s) 1552, 1643, 1661
AccB1I GGYRCC 1 cut(s) 1408
AccI GTMKAC 1 cut(s) 586
AciI CCGC 4 cut(s) 91, 215, 239, 325
AclWI GGATC 2 cut(s) 1037, 1935
AcoI YGGCCR 1 cut(s) 1512
AcsI RAATTY 2 cut(s) 676, 883
AcuI CTGAAG 2 cut(s) 1694, 1886
AcyI GRCGYC 1 cut(s) 1950
AfaI GTAC 4 cut(s) 134, 765, 855, 1588
AfiI CCNNNNNNNGG 5 cut(s) 163, 184, 712, 1882, 1924
AflIII ACRYGT 2 cut(s) 760, 1749
AjnI CCWGG 1 cut(s) 1383
AjuI GAANNNNNNNTTGG 2 cut(s) 1323, 1355
AloI GAACNNNNNNTCC 2 cut(s) 400, 432
Alw21I GWGCWC 2 cut(s) 67, 1307
Alw26I GTCTC 2 cut(s) 1177, 2020
AlwI GGATC 2 cut(s) 1037, 1935
AlwNI CAGNNNCTG 1 cut(s) 1909
AoxI GGCC 4 cut(s) 153, 579, 1512, 1713
ApeKI GCWGC 8 cut(s) 43, 1220, 1279, 1289, 1458, 1667, 1937, 2004
ApoI RAATTY 2 cut(s) 676, 883
Asp700I GAANNNNTTC 1 cut(s) 545
AspLEI GCGC 1 cut(s) 48
AspS9I GGNCC 4 cut(s) 154, 579, 694, 1822
AsuC2I CCSGG 1 cut(s) 179
AsuHPI GGTGA 3 cut(s) 208, 238, 451
AsuII TTCGAA 1 cut(s) 838
AvaII GGWCC 2 cut(s) 694, 1822
BalI TGGCCA 1 cut(s) 1514
BanI GGYRCC 1 cut(s) 1408
BanII GRGCYC 1 cut(s) 1307
Bbv12I GWGCWC 2 cut(s) 67, 1307
BbvI GCAGC 8 cut(s) 30, 1232, 1266, 1276, 1470, 1679, 1924, 2016
BceAI ACGGC 1 cut(s) 1700
BcgI CGANNNNNNTGC 2 cut(s) 247, 281
BciT130I CCWGG 1 cut(s) 1385
BclI TGATCA 1 cut(s) 1414
BcnI CCSGG 1 cut(s) 179
BcoDI GTCTC 2 cut(s) 1177, 2020
BfaI CTAG 3 cut(s) 30, 1862, 2081
BfmI CTRYAG 1 cut(s) 1559
BfuAI ACCTGC 3 cut(s) 1552, 1643, 1661
BisI GCNGC 8 cut(s) 44, 1221, 1280, 1290, 1459, 1668, 1938, 2005
BlpI GCTNAGC 1 cut(s) 1353
BlsI GCNGC 8 cut(s) 45, 1222, 1281, 1291, 1460, 1669, 1939, 2006
BmcAI AGTACT 1 cut(s) 1588
Bme1390I CCNGG 2 cut(s) 179, 1385
Bme18I GGWCC 2 cut(s) 694, 1822
BmgT120I GGNCC 4 cut(s) 154, 579, 694, 1822
BmiI GGNNCC 3 cut(s) 176, 1410, 1627
BmrFI CCNGG 2 cut(s) 179, 1385
BmrI ACTGGG 1 cut(s) 1599
BmsI GCATC 7 cut(s) 438, 993, 1054, 1230, 1832, 1854, 2102
BmuI ACTGGG 1 cut(s) 1599
BplI GAGNNNNNCTC 4 cut(s) 233, 265, 641, 673
BpmI CTGGAG 1 cut(s) 1931
Bpu1102I GCTNAGC 1 cut(s) 1353
Bpu14I TTCGAA 1 cut(s) 838
BpuEI CTTGAG 4 cut(s) 57, 137, 578, 1721
BpuMI CCSGG 1 cut(s) 179
BsaHI GRCGYC 1 cut(s) 1950
BsaJI CCNNGG 1 cut(s) 1881
BsaXI ACNNNNNCTCC 6 cut(s) 311, 341, 1126, 1156, 1981, 2011
Bsc4I CCNNNNNNNGG 5 cut(s) 163, 184, 712, 1882, 1924
Bse118I RCCGGY 1 cut(s) 581
Bse1I ACTGG 4 cut(s) 1259, 1515, 1594, 1958
Bse3DI GCAATG 7 cut(s) 55, 110, 491, 531, 1074, 2068, 2080
BseBI CCWGG 1 cut(s) 1385
BseDI CCNNGG 1 cut(s) 1881
BseGI GGATG 7 cut(s) 288, 321, 453, 835, 955, 1069, 1877
BseLI CCNNNNNNNGG 5 cut(s) 163, 184, 712, 1882, 1924
BseMI GCAATG 7 cut(s) 55, 110, 491, 531, 1074, 2068, 2080
BseMII CTCAG 2 cut(s) 1215, 1367
BseNI ACTGG 4 cut(s) 1259, 1515, 1594, 1958
BseRI GAGGAG 9 cut(s) 134, 179, 305, 524, 587, 1003, 1150, 1179, 1215
BseXI GCAGC 8 cut(s) 30, 1232, 1266, 1276, 1470, 1679, 1924, 2016
BsgI GTGCAG 2 cut(s) 1518, 1803
BshFI GGCC 4 cut(s) 155, 581, 1514, 1715
BshNI GGYRCC 1 cut(s) 1408
BsiHKAI GWGCWC 2 cut(s) 67, 1307
BsiSI CCGG 2 cut(s) 178, 582
BslFI GGGAC 2 cut(s) 260, 2088
BslI CCNNNNNNNGG 5 cut(s) 163, 184, 712, 1882, 1924
BsmAI GTCTC 2 cut(s) 1177, 2020
BsmFI GGGAC 2 cut(s) 260, 2088
BsmI GAATGC 1 cut(s) 707
BsnI GGCC 4 cut(s) 155, 581, 1514, 1715
Bsp119I TTCGAA 1 cut(s) 838
Bsp1286I GDGCHC 2 cut(s) 67, 1307
Bsp1407I TGTACA 1 cut(s) 763
Bsp143I GATC 3 cut(s) 1042, 1414, 1927
Bsp1720I GCTNAGC 1 cut(s) 1353
BspACI CCGC 4 cut(s) 91, 215, 239, 325
BspANI GGCC 4 cut(s) 155, 581, 1514, 1715
BspCNI CTCAG 2 cut(s) 1216, 1366
BspLI GGNNCC 3 cut(s) 176, 1410, 1627
BspMAI CTGCAG 1 cut(s) 1563
BspMI ACCTGC 3 cut(s) 1552, 1643, 1661
BspPI GGATC 2 cut(s) 1037, 1935
BspQI GCTCTTC 1 cut(s) 420
BspT104I TTCGAA 1 cut(s) 838
BspT107I GGYRCC 1 cut(s) 1408
BsrDI GCAATG 7 cut(s) 55, 110, 491, 531, 1074, 2068, 2080
BsrFI RCCGGY 1 cut(s) 581
BsrGI TGTACA 1 cut(s) 763
BsrI ACTGG 4 cut(s) 1259, 1515, 1594, 1958
BssAI RCCGGY 1 cut(s) 581
BssECI CCNNGG 1 cut(s) 1881
BssMI GATC 3 cut(s) 1042, 1414, 1927
BssNI GRCGYC 1 cut(s) 1950
BssT1I CCWWGG 1 cut(s) 1881
Bst2UI CCWGG 1 cut(s) 1385
Bst4CI ACNGT 5 cut(s) 100, 1056, 1126, 1770, 2102
Bst6I CTCTTC 4 cut(s) 216, 390, 420, 1032
BstACI GRCGYC 1 cut(s) 1950
BstAPI GCANNNNNTGC 1 cut(s) 1790
BstAUI TGTACA 1 cut(s) 763
BstBI TTCGAA 1 cut(s) 838
BstC8I GCNNGC 1 cut(s) 962
BstDEI CTNAG 6 cut(s) 138, 660, 1224, 1236, 1353, 1974
BstENI CCTNNNNNAGG 1 cut(s) 710
BstF5I GGATG 7 cut(s) 288, 321, 453, 835, 955, 1069, 1877
BstHHI GCGC 1 cut(s) 48
BstKTI GATC 3 cut(s) 1045, 1417, 1930
BstMAI GTCTC 2 cut(s) 1177, 2020
BstMBI GATC 3 cut(s) 1042, 1414, 1927
BstMWI GCNNNNNNNGC 2 cut(s) 121, 1790
BstNI CCWGG 1 cut(s) 1385
BstNSI RCATGY 4 cut(s) 764, 1753, 1944, 2090
BstSCI CCNGG 2 cut(s) 177, 1383
BstSFI CTRYAG 1 cut(s) 1559
BstV1I GCAGC 8 cut(s) 30, 1232, 1266, 1276, 1470, 1679, 1924, 2016
BstX2I RGATCY 1 cut(s) 1042
BstYI RGATCY 1 cut(s) 1042
BsuRI GGCC 4 cut(s) 155, 581, 1514, 1715
BtsCI GGATG 7 cut(s) 288, 321, 453, 835, 955, 1069, 1877
BtsIMutI CAGTG 2 cut(s) 1508, 1766
BveI ACCTGC 3 cut(s) 1552, 1643, 1661
Cac8I GCNNGC 1 cut(s) 962
CaiI CAGNNNCTG 1 cut(s) 1909
CfoI GCGC 1 cut(s) 48
Cfr10I RCCGGY 1 cut(s) 581
Cfr13I GGNCC 4 cut(s) 154, 579, 694, 1822
CseI GACGC 1 cut(s) 1958
Csp6I GTAC 4 cut(s) 133, 764, 854, 1587
CviAII CATG 9 cut(s) 68, 497, 590, 698, 761, 1073, 1750, 1941, 2087
CviQI GTAC 4 cut(s) 133, 764, 854, 1587
DdeI CTNAG 6 cut(s) 138, 660, 1224, 1236, 1353, 1974
DpnI GATC 3 cut(s) 1044, 1416, 1929
DpnII GATC 3 cut(s) 1042, 1414, 1927
EaeI YGGCCR 1 cut(s) 1512
Eam1104I CTCTTC 4 cut(s) 216, 390, 420, 1032
EarI CTCTTC 4 cut(s) 216, 390, 420, 1032
EciI GGCGGA 2 cut(s) 230, 254
Ecl136II GAGCTC 1 cut(s) 1305
Eco130I CCWWGG 1 cut(s) 1881
Eco24I GRGCYC 1 cut(s) 1307
Eco47I GGWCC 2 cut(s) 694, 1822
Eco53kI GAGCTC 1 cut(s) 1305
Eco57I CTGAAG 2 cut(s) 1694, 1886
EcoICRI GAGCTC 1 cut(s) 1305
EcoNI CCTNNNNNAGG 1 cut(s) 710
EcoO109I RGGNCCY 1 cut(s) 1822
EcoRI GAATTC 1 cut(s) 883
EcoRII CCWGG 1 cut(s) 1383
EcoT14I CCWWGG 1 cut(s) 1881
EcoT22I ATGCAT 3 cut(s) 1074, 1245, 1847
EcoT38I GRGCYC 1 cut(s) 1307
ErhI CCWWGG 1 cut(s) 1881
FaeI CATG 9 cut(s) 71, 500, 593, 701, 764, 1076, 1753, 1944, 2090
FaqI GGGAC 2 cut(s) 260, 2088
FatI CATG 9 cut(s) 67, 496, 589, 697, 760, 1072, 1749, 1940, 2086
FbaI TGATCA 1 cut(s) 1414
FblI GTMKAC 1 cut(s) 586
Fnu4HI GCNGC 8 cut(s) 44, 1221, 1280, 1290, 1459, 1668, 1938, 2005
FokI GGATG 7 cut(s) 295, 328, 460, 842, 962, 1076, 1864
FriOI GRGCYC 1 cut(s) 1307
Fsp4HI GCNGC 8 cut(s) 44, 1221, 1280, 1290, 1459, 1668, 1938, 2005
FspBI CTAG 3 cut(s) 30, 1862, 2081
FspI TGCGCA 1 cut(s) 47
GlaI GCGC 1 cut(s) 47
GluI GCNGC 8 cut(s) 44, 1221, 1280, 1290, 1459, 1668, 1938, 2005
GsuI CTGGAG 1 cut(s) 1931
HaeIII GGCC 4 cut(s) 155, 581, 1514, 1715
HapII CCGG 2 cut(s) 178, 582
HgaI GACGC 1 cut(s) 1958
HhaI GCGC 1 cut(s) 48
Hin1I GRCGYC 1 cut(s) 1950
Hin1II CATG 9 cut(s) 71, 500, 593, 701, 764, 1076, 1753, 1944, 2090
Hin6I GCGC 1 cut(s) 46
HinP1I GCGC 1 cut(s) 46
HincII GTYRAC 2 cut(s) 1122, 1743
HindII GTYRAC 2 cut(s) 1122, 1743
HindIII AAGCTT 2 cut(s) 75, 629
HpaI GTTAAC 1 cut(s) 1743
HpaII CCGG 2 cut(s) 178, 582
HphI GGTGA 3 cut(s) 208, 238, 451
Hpy166II GTNNAC 7 cut(s) 96, 135, 587, 776, 856, 1122, 1743
Hpy188III TCNNGA 5 cut(s) 947, 1418, 1682, 1931, 1946
Hpy8I GTNNAC 7 cut(s) 96, 135, 587, 776, 856, 1122, 1743
Hpy99I CGWCG 2 cut(s) 85, 1022
HpyCH4III ACNGT 5 cut(s) 100, 1056, 1126, 1770, 2102
HpyCH4IV ACGT 3 cut(s) 1214, 1495, 1996
HpyF10VI GCNNNNNNNGC 2 cut(s) 121, 1790
HpyF3I CTNAG 6 cut(s) 138, 660, 1224, 1236, 1353, 1974
HpySE526I ACGT 3 cut(s) 1214, 1495, 1996
Hsp92I GRCGYC 1 cut(s) 1950
Hsp92II CATG 9 cut(s) 71, 500, 593, 701, 764, 1076, 1753, 1944, 2090
HspAI GCGC 1 cut(s) 46
Ksp22I TGATCA 1 cut(s) 1414
KspAI GTTAAC 1 cut(s) 1743
Kzo9I GATC 3 cut(s) 1042, 1414, 1927
LguI GCTCTTC 1 cut(s) 420
LmnI GCTCC 8 cut(s) 112, 121, 361, 493, 607, 796, 1324, 1684
Lsp1109I GCAGC 8 cut(s) 30, 1232, 1266, 1276, 1470, 1679, 1924, 2016
LweI GCATC 7 cut(s) 438, 993, 1054, 1230, 1832, 1854, 2102
MaeI CTAG 3 cut(s) 30, 1862, 2081
MaeII ACGT 3 cut(s) 1214, 1495, 1996
MaeIII GTNAC 4 cut(s) 753, 1566, 1615, 2063
MalI GATC 3 cut(s) 1044, 1416, 1929
MboI GATC 3 cut(s) 1042, 1414, 1927
MfeI CAATTG 4 cut(s) 893, 965, 1193, 1465
MflI RGATCY 1 cut(s) 1042
MhlI GDGCHC 2 cut(s) 67, 1307
MlsI TGGCCA 1 cut(s) 1514
MluNI TGGCCA 1 cut(s) 1514
MlyI GAGTC 3 cut(s) 242, 1179, 1874
MmeI TCCRAC 2 cut(s) 1041, 1239
Mox20I TGGCCA 1 cut(s) 1514
Mph1103I ATGCAT 3 cut(s) 1074, 1245, 1847
MroXI GAANNNNTTC 1 cut(s) 545
MscI TGGCCA 1 cut(s) 1514
MseI TTAA 8 cut(s) 150, 234, 971, 1008, 1163, 1742, 1772, 1962
MslI CAYNNNNRTG 2 cut(s) 1362, 2073
Msp20I TGGCCA 1 cut(s) 1514
MspA1I CMGCKG 3 cut(s) 1223, 1373, 1613
MspI CCGG 2 cut(s) 178, 582
MspR9I CCNGG 2 cut(s) 179, 1385
MunI CAATTG 4 cut(s) 893, 965, 1193, 1465
Mva1269I GAATGC 1 cut(s) 707
MvaI CCWGG 1 cut(s) 1385
MwoI GCNNNNNNNGC 2 cut(s) 121, 1790
NciI CCSGG 1 cut(s) 179
NdeII GATC 3 cut(s) 1042, 1414, 1927
NlaIII CATG 9 cut(s) 71, 500, 593, 701, 764, 1076, 1753, 1944, 2090
NlaIV GGNNCC 3 cut(s) 176, 1410, 1627
NmuCI GTSAC 1 cut(s) 753
NsbI TGCGCA 1 cut(s) 47
NsiI ATGCAT 3 cut(s) 1074, 1245, 1847
NspI RCATGY 4 cut(s) 764, 1753, 1944, 2090
NspV TTCGAA 1 cut(s) 838
PaqCI CACCTGC 1 cut(s) 1552
PciI ACATGT 2 cut(s) 760, 1749
PciSI GCTCTTC 1 cut(s) 420
PctI GAATGC 1 cut(s) 707
PdmI GAANNNNTTC 1 cut(s) 545
PkrI GCNGC 8 cut(s) 45, 1222, 1281, 1291, 1460, 1669, 1939, 2006
PleI GAGTC 3 cut(s) 242, 1178, 1873
PpsI GAGTC 3 cut(s) 242, 1178, 1873
PpuMI RGGWCCY 1 cut(s) 1822
PscI ACATGT 2 cut(s) 760, 1749
Psp124BI GAGCTC 1 cut(s) 1307
Psp5II RGGWCCY 1 cut(s) 1822
Psp6I CCWGG 1 cut(s) 1383
PspGI CCWGG 1 cut(s) 1383
PspN4I GGNNCC 3 cut(s) 176, 1410, 1627
PspPI GGNCC 4 cut(s) 154, 579, 694, 1822
PspPPI RGGWCCY 1 cut(s) 1822
PstI CTGCAG 1 cut(s) 1563
PstNI CAGNNNCTG 1 cut(s) 1909
PsuI RGATCY 1 cut(s) 1042
PvuII CAGCTG 3 cut(s) 1223, 1373, 1613
RsaI GTAC 4 cut(s) 134, 765, 855, 1588
RsaNI GTAC 4 cut(s) 133, 764, 854, 1587
RseI CAYNNNNRTG 2 cut(s) 1362, 2073
SacI GAGCTC 1 cut(s) 1307
SapI GCTCTTC 1 cut(s) 420
SaqAI TTAA 8 cut(s) 150, 234, 971, 1008, 1163, 1742, 1772, 1962
SatI GCNGC 8 cut(s) 44, 1221, 1280, 1290, 1459, 1668, 1938, 2005
Sau3AI GATC 3 cut(s) 1042, 1414, 1927
Sau96I GGNCC 4 cut(s) 154, 579, 694, 1822
ScaI AGTACT 1 cut(s) 1588
SchI GAGTC 3 cut(s) 242, 1179, 1874
ScrFI CCNGG 2 cut(s) 179, 1385
SduI GDGCHC 2 cut(s) 67, 1307
SfaNI GCATC 7 cut(s) 438, 993, 1054, 1230, 1832, 1854, 2102
SfcI CTRYAG 1 cut(s) 1559
SfuI TTCGAA 1 cut(s) 838
SinI GGWCC 2 cut(s) 694, 1822
SmiMI CAYNNNNRTG 2 cut(s) 1362, 2073
SmlI CTYRAG 4 cut(s) 72, 116, 557, 1736
SmoI CTYRAG 4 cut(s) 72, 116, 557, 1736
SsiI CCGC 4 cut(s) 91, 215, 239, 325
SspI AATATT 2 cut(s) 1183, 1519
SspMI CTAG 3 cut(s) 30, 1862, 2081
SstI GAGCTC 1 cut(s) 1307
StyD4I CCNGG 2 cut(s) 177, 1383
StyI CCWWGG 1 cut(s) 1881
TaaI ACNGT 5 cut(s) 100, 1056, 1126, 1770, 2102
TaiI ACGT 3 cut(s) 1217, 1498, 1999
TaqI TCGA 6 cut(s) 83, 251, 566, 838, 875, 1017
TatI WGTACW 4 cut(s) 132, 763, 853, 1586
Tru1I TTAA 8 cut(s) 150, 234, 971, 1008, 1163, 1742, 1772, 1962
Tru9I TTAA 8 cut(s) 150, 234, 971, 1008, 1163, 1742, 1772, 1962
TscAI CASTG 2 cut(s) 1515, 1773
TseFI GTSAC 1 cut(s) 753
TseI GCWGC 8 cut(s) 43, 1220, 1279, 1289, 1458, 1667, 1937, 2004
Tsp45I GTSAC 1 cut(s) 753
TspDTI ATGAA 4 cut(s) 684, 714, 989, 1077
TspRI CASTG 2 cut(s) 1515, 1773
VpaK11BI GGWCC 2 cut(s) 694, 1822
XagI CCTNNNNNAGG 1 cut(s) 710
XapI RAATTY 2 cut(s) 676, 883
XceI RCATGY 4 cut(s) 764, 1753, 1944, 2090
XmiI GTMKAC 1 cut(s) 586
XmnI GAANNNNTTC 1 cut(s) 545
XspI CTAG 3 cut(s) 30, 1862, 2081
ZrmI AGTACT 1 cut(s) 1588
Zsp2I ATGCAT 3 cut(s) 1074, 1245, 1847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.