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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g30690 FvH4_7g30690 |
| rosa_chinensis | RchiOBHm_Chr1g0379641 |
| rosa_laevigata | RLG00000026373 |
| rosa_roxburghii | Rroxscaffold_4G00279990 |
| rosa_rugosa | Rorug01G0413700 |
| rosa_samantha | Rh1AG437600 Rh1BG393700 Rh1CG406600 Rh1DG424600 |
| rosa_wichuraiana | Rw1G038130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1552, 1661 |
| Acc36I | ACCTGC | 4 cut(s) | 1504, 1552, 1643, 1661 |
| AccB1I | GGYRCC | 1 cut(s) | 1408 |
| AccI | GTMKAC | 1 cut(s) | 586 |
| AciI | CCGC | 5 cut(s) | 46, 91, 239, 325, 1559 |
| AclWI | GGATC | 2 cut(s) | 1037, 1935 |
| AcoI | YGGCCR | 1 cut(s) | 1512 |
| AcsI | RAATTY | 2 cut(s) | 676, 883 |
| AcuI | CTGAAG | 2 cut(s) | 1694, 1886 |
| AcyI | GRCGYC | 1 cut(s) | 1950 |
| AfaI | GTAC | 4 cut(s) | 134, 765, 855, 1588 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 163, 184, 712, 1882, 1924 |
| AflIII | ACRYGT | 2 cut(s) | 760, 1749 |
| AhlI | ACTAGT | 1 cut(s) | 1639 |
| AjnI | CCWGG | 2 cut(s) | 1383, 2080 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1043, 1075, 1323, 1355 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 400, 432 |
| Alw21I | GWGCWC | 2 cut(s) | 1307, 1439 |
| Alw26I | GTCTC | 3 cut(s) | 1177, 1340, 2020 |
| AlwI | GGATC | 2 cut(s) | 1037, 1935 |
| AoxI | GGCC | 4 cut(s) | 153, 579, 1512, 1713 |
| ApoI | RAATTY | 2 cut(s) | 676, 883 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 545 |
| AspS9I | GGNCC | 4 cut(s) | 154, 579, 694, 1822 |
| AsuC2I | CCSGG | 2 cut(s) | 179, 1591 |
| AsuHPI | GGTGA | 3 cut(s) | 208, 238, 451 |
| AsuII | TTCGAA | 1 cut(s) | 838 |
| AvaII | GGWCC | 2 cut(s) | 694, 1822 |
| BalI | TGGCCA | 1 cut(s) | 1514 |
| BanI | GGYRCC | 1 cut(s) | 1408 |
| BanII | GRGCYC | 1 cut(s) | 1307 |
| Bbv12I | GWGCWC | 2 cut(s) | 1307, 1439 |
| BceAI | ACGGC | 1 cut(s) | 1700 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 247, 281 |
| BciT130I | CCWGG | 2 cut(s) | 1385, 2082 |
| BclI | TGATCA | 1 cut(s) | 1414 |
| BcnI | CCSGG | 2 cut(s) | 179, 1591 |
| BcoDI | GTCTC | 3 cut(s) | 1177, 1340, 2020 |
| BcuI | ACTAGT | 1 cut(s) | 1639 |
| BfaI | CTAG | 3 cut(s) | 1640, 1862, 1910 |
| BfmI | CTRYAG | 1 cut(s) | 1497 |
| BfuAI | ACCTGC | 4 cut(s) | 1504, 1552, 1643, 1661 |
| BlpI | GCTNAGC | 1 cut(s) | 1353 |
| Bme1390I | CCNGG | 4 cut(s) | 179, 1385, 1591, 2082 |
| Bme18I | GGWCC | 2 cut(s) | 694, 1822 |
| BmgT120I | GGNCC | 4 cut(s) | 154, 579, 694, 1822 |
| BmiI | GGNNCC | 4 cut(s) | 176, 695, 1410, 1627 |
| BmrFI | CCNGG | 4 cut(s) | 179, 1385, 1591, 2082 |
| BmsI | GCATC | 6 cut(s) | 438, 1054, 1230, 1832, 1854, 2102 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 233, 265, 641, 673 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1353 |
| Bpu14I | TTCGAA | 1 cut(s) | 838 |
| BpuEI | CTTGAG | 5 cut(s) | 57, 137, 578, 611, 1721 |
| BpuMI | CCSGG | 2 cut(s) | 179, 1591 |
| BsaHI | GRCGYC | 1 cut(s) | 1950 |
| BsaJI | CCNNGG | 2 cut(s) | 1881, 2081 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 311, 341, 1126, 1156, 1981, 2011 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 163, 184, 712, 1882, 1924 |
| Bse118I | RCCGGY | 1 cut(s) | 581 |
| Bse1I | ACTGG | 4 cut(s) | 1059, 1259, 1515, 1958 |
| Bse3DI | GCAATG | 5 cut(s) | 110, 491, 1074, 2068, 2080 |
| BseBI | CCWGG | 2 cut(s) | 1385, 2082 |
| BseDI | CCNNGG | 2 cut(s) | 1881, 2081 |
| BseGI | GGATG | 8 cut(s) | 288, 321, 453, 835, 955, 1069, 1847, 1877 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 163, 184, 712, 1882, 1924 |
| BseMI | GCAATG | 5 cut(s) | 110, 491, 1074, 2068, 2080 |
| BseMII | CTCAG | 3 cut(s) | 1205, 1215, 1367 |
| BseNI | ACTGG | 4 cut(s) | 1059, 1259, 1515, 1958 |
| BsgI | GTGCAG | 1 cut(s) | 1803 |
| BshFI | GGCC | 4 cut(s) | 155, 581, 1514, 1715 |
| BshNI | GGYRCC | 1 cut(s) | 1408 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1307, 1439 |
| BsiSI | CCGG | 3 cut(s) | 178, 582, 1590 |
| BslFI | GGGAC | 1 cut(s) | 260 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 163, 184, 712, 1882, 1924 |
| BsmAI | GTCTC | 3 cut(s) | 1177, 1340, 2020 |
| BsmFI | GGGAC | 1 cut(s) | 260 |
| BsmI | GAATGC | 2 cut(s) | 55, 707 |
| BsnI | GGCC | 4 cut(s) | 155, 581, 1514, 1715 |
| Bsp119I | TTCGAA | 1 cut(s) | 838 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1307, 1439 |
| Bsp1407I | TGTACA | 1 cut(s) | 763 |
| Bsp143I | GATC | 3 cut(s) | 1042, 1414, 1927 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1353 |
| BspACI | CCGC | 5 cut(s) | 46, 91, 239, 325, 1559 |
| BspANI | GGCC | 4 cut(s) | 155, 581, 1514, 1715 |
| BspCNI | CTCAG | 3 cut(s) | 1204, 1216, 1366 |
| BspLI | GGNNCC | 4 cut(s) | 176, 695, 1410, 1627 |
| BspMAI | CTGCAG | 1 cut(s) | 1501 |
| BspMI | ACCTGC | 4 cut(s) | 1504, 1552, 1643, 1661 |
| BspPI | GGATC | 2 cut(s) | 1037, 1935 |
| BspQI | GCTCTTC | 1 cut(s) | 420 |
| BspT104I | TTCGAA | 1 cut(s) | 838 |
| BspT107I | GGYRCC | 1 cut(s) | 1408 |
| BsrDI | GCAATG | 5 cut(s) | 110, 491, 1074, 2068, 2080 |
| BsrFI | RCCGGY | 1 cut(s) | 581 |
| BsrGI | TGTACA | 1 cut(s) | 763 |
| BsrI | ACTGG | 4 cut(s) | 1059, 1259, 1515, 1958 |
| BssAI | RCCGGY | 1 cut(s) | 581 |
| BssECI | CCNNGG | 2 cut(s) | 1881, 2081 |
| BssMI | GATC | 3 cut(s) | 1042, 1414, 1927 |
| BssNI | GRCGYC | 1 cut(s) | 1950 |
| BssT1I | CCWWGG | 1 cut(s) | 1881 |
| Bst2UI | CCWGG | 2 cut(s) | 1385, 2082 |
| Bst4CI | ACNGT | 2 cut(s) | 1126, 1770 |
| Bst6I | CTCTTC | 4 cut(s) | 216, 390, 420, 1032 |
| BstACI | GRCGYC | 1 cut(s) | 1950 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1790 |
| BstAUI | TGTACA | 1 cut(s) | 763 |
| BstBI | TTCGAA | 1 cut(s) | 838 |
| BstC8I | GCNNGC | 1 cut(s) | 962 |
| BstDEI | CTNAG | 8 cut(s) | 138, 660, 1191, 1224, 1236, 1353, 1974, 2108 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 710 |
| BstF5I | GGATG | 8 cut(s) | 288, 321, 453, 835, 955, 1069, 1847, 1877 |
| BstKTI | GATC | 3 cut(s) | 1045, 1417, 1930 |
| BstMAI | GTCTC | 3 cut(s) | 1177, 1340, 2020 |
| BstMBI | GATC | 3 cut(s) | 1042, 1414, 1927 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 97, 121, 1790 |
| BstNI | CCWGG | 2 cut(s) | 1385, 2082 |
| BstNSI | RCATGY | 4 cut(s) | 764, 1753, 1944, 2090 |
| BstSCI | CCNGG | 4 cut(s) | 177, 1383, 1589, 2080 |
| BstSFI | CTRYAG | 1 cut(s) | 1497 |
| BstX2I | RGATCY | 1 cut(s) | 1042 |
| BstYI | RGATCY | 1 cut(s) | 1042 |
| BsuRI | GGCC | 4 cut(s) | 155, 581, 1514, 1715 |
| BtsCI | GGATG | 8 cut(s) | 288, 321, 453, 835, 955, 1069, 1847, 1877 |
| BtsIMutI | CAGTG | 2 cut(s) | 1508, 1766 |
| BveI | ACCTGC | 4 cut(s) | 1504, 1552, 1643, 1661 |
| Cac8I | GCNNGC | 1 cut(s) | 962 |
| Cfr10I | RCCGGY | 1 cut(s) | 581 |
| Cfr13I | GGNCC | 4 cut(s) | 154, 579, 694, 1822 |
| CseI | GACGC | 1 cut(s) | 1958 |
| Csp6I | GTAC | 4 cut(s) | 133, 764, 854, 1587 |
| CviAII | CATG | 6 cut(s) | 698, 761, 1073, 1750, 1941, 2087 |
| CviQI | GTAC | 4 cut(s) | 133, 764, 854, 1587 |
| DdeI | CTNAG | 8 cut(s) | 138, 660, 1191, 1224, 1236, 1353, 1974, 2108 |
| DpnI | GATC | 3 cut(s) | 1044, 1416, 1929 |
| DpnII | GATC | 3 cut(s) | 1042, 1414, 1927 |
| EaeI | YGGCCR | 1 cut(s) | 1512 |
| Eam1104I | CTCTTC | 4 cut(s) | 216, 390, 420, 1032 |
| EarI | CTCTTC | 4 cut(s) | 216, 390, 420, 1032 |
| EciI | GGCGGA | 1 cut(s) | 254 |
| Ecl136II | GAGCTC | 1 cut(s) | 1305 |
| Eco130I | CCWWGG | 1 cut(s) | 1881 |
| Eco24I | GRGCYC | 1 cut(s) | 1307 |
| Eco47I | GGWCC | 2 cut(s) | 694, 1822 |
| Eco53kI | GAGCTC | 1 cut(s) | 1305 |
| Eco57I | CTGAAG | 2 cut(s) | 1694, 1886 |
| EcoICRI | GAGCTC | 1 cut(s) | 1305 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 710 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1822 |
| EcoRI | GAATTC | 1 cut(s) | 883 |
| EcoRII | CCWGG | 2 cut(s) | 1383, 2080 |
| EcoT14I | CCWWGG | 1 cut(s) | 1881 |
| EcoT22I | ATGCAT | 3 cut(s) | 1074, 1245, 1847 |
| EcoT38I | GRGCYC | 1 cut(s) | 1307 |
| ErhI | CCWWGG | 1 cut(s) | 1881 |
| FaeI | CATG | 6 cut(s) | 701, 764, 1076, 1753, 1944, 2090 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1103, 1135 |
| FaqI | GGGAC | 1 cut(s) | 260 |
| FatI | CATG | 6 cut(s) | 697, 760, 1072, 1749, 1940, 2086 |
| FauI | CCCGC | 1 cut(s) | 1566 |
| FbaI | TGATCA | 1 cut(s) | 1414 |
| FblI | GTMKAC | 1 cut(s) | 586 |
| FokI | GGATG | 8 cut(s) | 295, 328, 460, 842, 962, 1076, 1854, 1864 |
| FriOI | GRGCYC | 1 cut(s) | 1307 |
| FspBI | CTAG | 3 cut(s) | 1640, 1862, 1910 |
| HaeIII | GGCC | 4 cut(s) | 155, 581, 1514, 1715 |
| HapII | CCGG | 3 cut(s) | 178, 582, 1590 |
| HgaI | GACGC | 1 cut(s) | 1958 |
| Hin1I | GRCGYC | 1 cut(s) | 1950 |
| Hin1II | CATG | 6 cut(s) | 701, 764, 1076, 1753, 1944, 2090 |
| HincII | GTYRAC | 1 cut(s) | 1743 |
| HindII | GTYRAC | 1 cut(s) | 1743 |
| HindIII | AAGCTT | 2 cut(s) | 75, 629 |
| HpaI | GTTAAC | 1 cut(s) | 1743 |
| HpaII | CCGG | 3 cut(s) | 178, 582, 1590 |
| HphI | GGTGA | 3 cut(s) | 208, 238, 451 |
| Hpy166II | GTNNAC | 6 cut(s) | 96, 135, 587, 776, 856, 1743 |
| Hpy188III | TCNNGA | 5 cut(s) | 521, 1418, 1682, 1931, 1946 |
| Hpy8I | GTNNAC | 6 cut(s) | 96, 135, 587, 776, 856, 1743 |
| Hpy99I | CGWCG | 2 cut(s) | 85, 1022 |
| HpyCH4III | ACNGT | 2 cut(s) | 1126, 1770 |
| HpyCH4IV | ACGT | 1 cut(s) | 1996 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 97, 121, 1790 |
| HpyF3I | CTNAG | 8 cut(s) | 138, 660, 1191, 1224, 1236, 1353, 1974, 2108 |
| HpySE526I | ACGT | 1 cut(s) | 1996 |
| Hsp92I | GRCGYC | 1 cut(s) | 1950 |
| Hsp92II | CATG | 6 cut(s) | 701, 764, 1076, 1753, 1944, 2090 |
| Ksp22I | TGATCA | 1 cut(s) | 1414 |
| KspAI | GTTAAC | 1 cut(s) | 1743 |
| Kzo9I | GATC | 3 cut(s) | 1042, 1414, 1927 |
| LguI | GCTCTTC | 1 cut(s) | 420 |
| LmnI | GCTCC | 6 cut(s) | 112, 121, 607, 796, 1324, 1684 |
| LweI | GCATC | 6 cut(s) | 438, 1054, 1230, 1832, 1854, 2102 |
| MaeI | CTAG | 3 cut(s) | 1640, 1862, 1910 |
| MaeII | ACGT | 1 cut(s) | 1996 |
| MaeIII | GTNAC | 5 cut(s) | 753, 1566, 1615, 1635, 2063 |
| MalI | GATC | 3 cut(s) | 1044, 1416, 1929 |
| MboI | GATC | 3 cut(s) | 1042, 1414, 1927 |
| MfeI | CAATTG | 3 cut(s) | 893, 965, 1465 |
| MflI | RGATCY | 1 cut(s) | 1042 |
| MhlI | GDGCHC | 2 cut(s) | 1307, 1439 |
| MlsI | TGGCCA | 1 cut(s) | 1514 |
| MluNI | TGGCCA | 1 cut(s) | 1514 |
| MlyI | GAGTC | 4 cut(s) | 242, 1179, 1438, 1874 |
| MmeI | TCCRAC | 2 cut(s) | 1041, 1239 |
| Mox20I | TGGCCA | 1 cut(s) | 1514 |
| Mph1103I | ATGCAT | 3 cut(s) | 1074, 1245, 1847 |
| MroXI | GAANNNNTTC | 1 cut(s) | 545 |
| MscI | TGGCCA | 1 cut(s) | 1514 |
| MseI | TTAA | 9 cut(s) | 150, 234, 971, 1001, 1008, 1163, 1742, 1772, 1962 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1362, 2073 |
| Msp20I | TGGCCA | 1 cut(s) | 1514 |
| MspA1I | CMGCKG | 3 cut(s) | 1223, 1373, 1613 |
| MspI | CCGG | 3 cut(s) | 178, 582, 1590 |
| MspR9I | CCNGG | 4 cut(s) | 179, 1385, 1591, 2082 |
| MunI | CAATTG | 3 cut(s) | 893, 965, 1465 |
| Mva1269I | GAATGC | 2 cut(s) | 55, 707 |
| MvaI | CCWGG | 2 cut(s) | 1385, 2082 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 97, 121, 1790 |
| NciI | CCSGG | 2 cut(s) | 179, 1591 |
| NdeII | GATC | 3 cut(s) | 1042, 1414, 1927 |
| NlaIII | CATG | 6 cut(s) | 701, 764, 1076, 1753, 1944, 2090 |
| NlaIV | GGNNCC | 4 cut(s) | 176, 695, 1410, 1627 |
| NmuCI | GTSAC | 2 cut(s) | 753, 1635 |
| NsiI | ATGCAT | 3 cut(s) | 1074, 1245, 1847 |
| NspI | RCATGY | 4 cut(s) | 764, 1753, 1944, 2090 |
| NspV | TTCGAA | 1 cut(s) | 838 |
| PaqCI | CACCTGC | 2 cut(s) | 1552, 1661 |
| PciI | ACATGT | 2 cut(s) | 760, 1749 |
| PciSI | GCTCTTC | 1 cut(s) | 420 |
| PctI | GAATGC | 2 cut(s) | 55, 707 |
| PdmI | GAANNNNTTC | 1 cut(s) | 545 |
| PleI | GAGTC | 4 cut(s) | 242, 1178, 1437, 1873 |
| PpsI | GAGTC | 4 cut(s) | 242, 1178, 1437, 1873 |
| PpuMI | RGGWCCY | 1 cut(s) | 1822 |
| PscI | ACATGT | 2 cut(s) | 760, 1749 |
| Psp124BI | GAGCTC | 1 cut(s) | 1307 |
| Psp5II | RGGWCCY | 1 cut(s) | 1822 |
| Psp6I | CCWGG | 2 cut(s) | 1383, 2080 |
| PspGI | CCWGG | 2 cut(s) | 1383, 2080 |
| PspN4I | GGNNCC | 4 cut(s) | 176, 695, 1410, 1627 |
| PspPI | GGNCC | 4 cut(s) | 154, 579, 694, 1822 |
| PspPPI | RGGWCCY | 1 cut(s) | 1822 |
| PstI | CTGCAG | 1 cut(s) | 1501 |
| PsuI | RGATCY | 1 cut(s) | 1042 |
| PvuII | CAGCTG | 3 cut(s) | 1223, 1373, 1613 |
| RsaI | GTAC | 4 cut(s) | 134, 765, 855, 1588 |
| RsaNI | GTAC | 4 cut(s) | 133, 764, 854, 1587 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1362, 2073 |
| SacI | GAGCTC | 1 cut(s) | 1307 |
| SapI | GCTCTTC | 1 cut(s) | 420 |
| SaqAI | TTAA | 9 cut(s) | 150, 234, 971, 1001, 1008, 1163, 1742, 1772, 1962 |
| Sau3AI | GATC | 3 cut(s) | 1042, 1414, 1927 |
| Sau96I | GGNCC | 4 cut(s) | 154, 579, 694, 1822 |
| SchI | GAGTC | 4 cut(s) | 242, 1179, 1438, 1874 |
| ScrFI | CCNGG | 4 cut(s) | 179, 1385, 1591, 2082 |
| SduI | GDGCHC | 2 cut(s) | 1307, 1439 |
| SfaNI | GCATC | 6 cut(s) | 438, 1054, 1230, 1832, 1854, 2102 |
| SfcI | CTRYAG | 1 cut(s) | 1497 |
| SfuI | TTCGAA | 1 cut(s) | 838 |
| SinI | GGWCC | 2 cut(s) | 694, 1822 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1362, 2073 |
| SmlI | CTYRAG | 5 cut(s) | 72, 116, 557, 590, 1736 |
| SmoI | CTYRAG | 5 cut(s) | 72, 116, 557, 590, 1736 |
| SpeI | ACTAGT | 1 cut(s) | 1639 |
| SsiI | CCGC | 5 cut(s) | 46, 91, 239, 325, 1559 |
| SspI | AATATT | 1 cut(s) | 1519 |
| SspMI | CTAG | 3 cut(s) | 1640, 1862, 1910 |
| SstI | GAGCTC | 1 cut(s) | 1307 |
| StyD4I | CCNGG | 4 cut(s) | 177, 1383, 1589, 2080 |
| StyI | CCWWGG | 1 cut(s) | 1881 |
| TaaI | ACNGT | 2 cut(s) | 1126, 1770 |
| TaiI | ACGT | 1 cut(s) | 1999 |
| TaqI | TCGA | 8 cut(s) | 83, 162, 251, 520, 566, 838, 875, 1017 |
| TatI | WGTACW | 3 cut(s) | 132, 763, 853 |
| Tru1I | TTAA | 9 cut(s) | 150, 234, 971, 1001, 1008, 1163, 1742, 1772, 1962 |
| Tru9I | TTAA | 9 cut(s) | 150, 234, 971, 1001, 1008, 1163, 1742, 1772, 1962 |
| TscAI | CASTG | 2 cut(s) | 1515, 1773 |
| TseFI | GTSAC | 2 cut(s) | 753, 1635 |
| Tsp45I | GTSAC | 2 cut(s) | 753, 1635 |
| TspDTI | ATGAA | 5 cut(s) | 684, 714, 989, 1077, 1226 |
| TspGWI | ACGGA | 1 cut(s) | 1540 |
| TspRI | CASTG | 2 cut(s) | 1515, 1773 |
| VpaK11BI | GGWCC | 2 cut(s) | 694, 1822 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 710 |
| XapI | RAATTY | 2 cut(s) | 676, 883 |
| XceI | RCATGY | 4 cut(s) | 764, 1753, 1944, 2090 |
| XmiI | GTMKAC | 1 cut(s) | 586 |
| XmnI | GAANNNNTTC | 1 cut(s) | 545 |
| XspI | CTAG | 3 cut(s) | 1640, 1862, 1910 |
| Zsp2I | ATGCAT | 3 cut(s) | 1074, 1245, 1847 |