RCHIOBHM_CHR0C29G0501181

No description available

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 147 bp
ATGGCAGGACAAAGCATTGATCTTCATAACAATGGTAATCTCCTAAGACAAGGCTGGAGACTCAAGTTCTTTGATTGTGCAGATGGTTCTCGTGGATTAGTTCATGACTTGATTTTGGGGTTTCTTCAGTTTTTGGTTCTTCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

48

Amino Acids

5.4

Weight (kDa)

6.69

Isoelectric Point (pI)

46.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0029508)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr0c29g0501181
rosa_multiflora Rmu_ssc0000480.1_g000021

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 110
Alw26I GTCTC 1 cut(s) 52
BauI CACGAG 1 cut(s) 90
BccI CCATC 1 cut(s) 77
BcoDI GTCTC 1 cut(s) 52
BpmI CTGGAG 1 cut(s) 76
BpuEI CTTGAG 1 cut(s) 47
BsgI GTGCAG 1 cut(s) 99
BsmAI GTCTC 1 cut(s) 52
Bsp143I GATC 1 cut(s) 19
BspHI TCATGA 1 cut(s) 103
BssMI GATC 1 cut(s) 19
BssSI CACGAG 1 cut(s) 90
Bst2BI CACGAG 1 cut(s) 90
BstDEI CTNAG 1 cut(s) 44
BstKTI GATC 1 cut(s) 22
BstMAI GTCTC 1 cut(s) 52
BstMBI GATC 1 cut(s) 19
CciI TCATGA 1 cut(s) 103
CviAII CATG 1 cut(s) 104
CviJI RGCY 1 cut(s) 54
CviKI_1 RGCY 1 cut(s) 54
DdeI CTNAG 1 cut(s) 44
DpnI GATC 1 cut(s) 21
DpnII GATC 1 cut(s) 19
Eco57I CTGAAG 1 cut(s) 110
FaeI CATG 1 cut(s) 107
FaiI YATR 2 cut(s) 27, 105
FatI CATG 1 cut(s) 103
GsuI CTGGAG 1 cut(s) 76
Hin1II CATG 1 cut(s) 107
HinfI GANTC 1 cut(s) 60
Hpy188III TCNNGA 1 cut(s) 104
HpyCH4V TGCA 1 cut(s) 80
HpyF3I CTNAG 1 cut(s) 44
Hsp92II CATG 1 cut(s) 107
Kzo9I GATC 1 cut(s) 19
LpnPI CCDG 1 cut(s) 40
MalI GATC 1 cut(s) 21
MboI GATC 1 cut(s) 19
MboII GAAGA 3 cut(s) 14, 116, 131
MlyI GAGTC 1 cut(s) 54
MslI CAYNNNNRTG 1 cut(s) 30
NdeII GATC 1 cut(s) 19
NlaIII CATG 1 cut(s) 107
PagI TCATGA 1 cut(s) 103
PleI GAGTC 1 cut(s) 54
PpsI GAGTC 1 cut(s) 54
RseI CAYNNNNRTG 1 cut(s) 30
Sau3AI GATC 1 cut(s) 19
SchI GAGTC 1 cut(s) 54
SgeI CNNG 8 cut(s) 18, 62, 67, 76, 102, 104, 116, 121
SmiMI CAYNNNNRTG 1 cut(s) 30
SmlI CTYRAG 1 cut(s) 62
SmoI CTYRAG 1 cut(s) 62
TspDTI ATGAA 2 cut(s) 14, 92
TspGWI ACGGA 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.